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1.
New Phytol ; 233(5): 2266-2281, 2022 03.
Article in English | MEDLINE | ID: mdl-34942019

ABSTRACT

Previous studies have found a correlation between the abilities of PVX vector-expressed HCPro variants to bind small RNAs (sRNAs), and to suppress silencing. Moreover, HCPro preferred to bind viral sRNAs of 21-22 nucleotides (nt) containing 5'-terminal adenines. This would require such viral sRNAs to have either different access to the suppressor than those of plant sequences, or different molecular properties. To investigate this preference further, we have used suppressor-competent or suppressor-deficient HCPro variants, expressed from either T-DNAs or potyvirus constructs. Then, the sRNAs generated in plants and associated with the purified HCPro variants were characterized. Marked differences were observed in the ratios of sRNAs of plant vs nonplant origin that bound to suppressor-competent HCPro, depending on the mode of its expression. Regardless of the means of expression, HCPro retained the same preference among the nonplant sRNAs of 21-22 nt for those with 5'-terminal adenines. Relative methylation levels of individual sRNAs were assessed, and the nonplant sRNAs were found to be significantly less methylated in the presence of the suppressor. Targeted binding of sRNAs based on size, 5'-terminal sequence and origin, together with affecting their methylation, could explain how HCPro counteracts silencing.


Subject(s)
Nicotiana , Nucleotides , Adenine , Methylation , Nucleotides/metabolism , Plant Diseases , RNA Interference , RNA, Viral/genetics , RNA, Viral/metabolism , Nicotiana/metabolism , Viral Proteins/metabolism
2.
Bioorg Chem ; 36(6): 265-70, 2008 Dec.
Article in English | MEDLINE | ID: mdl-18752827

ABSTRACT

We describe compounds in which an emollient or a humectant bears an alpha,beta-unsaturated thiol ester capable of reacting with nucleophilic amino acids in stratum corneum proteins. These compounds should serve as long-lasting moisturizers for skin. The emollient derivatized was octadecyl propanoate, and the humectant was poly(ethylene glycol). These hydrophobic and hydrophilic compounds, as well as a fluorescent, dansyl-containing thiol ester, were found to react within minutes with the thiol N-acetylcysteamine upon addition of a catalytic amount of an organic base in chloroform. The structures of the products resulting from conjugate addition to the unsaturated thiol esters were determined by NMR spectroscopy. In the case of the alpha,beta,gamma,delta-unsaturated (sorboyl) thiol ester, both the 1,4-addition product and the beta,gamma-unsaturated-1,6-addition product formed, followed by diadduct. An in vivo test of the fluorescent alpha,beta-unsaturated thiol ester showed that this compound persisted on skin for 3 weeks vs. 6 days for the non-bonding control compound.


Subject(s)
Emollients/chemistry , Esters/chemistry , Skin/drug effects , Skin/metabolism , Sulfhydryl Compounds/chemistry , Administration, Cutaneous , Amino Acids/chemistry , Catalysis , Chemistry, Organic/methods , Chloroform/chemistry , Cysteamine/chemistry , Fluorescent Dyes/chemistry , Hydrogen-Ion Concentration , Magnetic Resonance Spectroscopy , Models, Chemical , Time Factors
3.
J Phys Chem B ; 110(15): 7613-6, 2006 Apr 20.
Article in English | MEDLINE | ID: mdl-16610849

ABSTRACT

Ice is selectively intolerant to impurities. A preponderance of implanted anions or cations generates electrical imbalances in ice grown from electrolyte solutions. Since the excess charges are ultimately neutralized via interfacial (H(+)/HO(-)) transport, the acidity of the unfrozen portion can change significantly and permanently. This insufficiently recognized phenomenon should critically affect rates and equilibria in frozen media. Here we report the effective (19)F NMR chemical shift of 3-fluorobenzoic acid as in situ probe of the acidity of extensively frozen electrolyte solutions. The sign and magnitude of the acidity changes associated with freezing are largely determined by specific ion combinations, but depend also on solute concentration and/or the extent of supercooling. NaCl solutions become more basic, those of (NH(4))(2)SO(4) or Na(2)SO(4) become more acidic, while solutions of the 2-(N-morpholino)ethanesulfonic acid zwitterion barely change their acidity upon freezing. We discuss how acidity scales based on solid-state NMR measurements could be used to assess the degree of ionization of weak acids and bases in frozen media.


Subject(s)
Electrolytes/chemistry , Algorithms , Fluorine/chemistry , Freezing , Hydrogen-Ion Concentration , Magnetic Resonance Spectroscopy , Solutions , Temperature
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