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1.
Antibiotics (Basel) ; 13(1)2024 Jan 14.
Article in English | MEDLINE | ID: mdl-38247637

ABSTRACT

Antimicrobial peptides have been developed based on plant-derived molecular scaffolds for the treatment of infectious diseases. Chenopodin is an abundant seed storage protein in quinoa, an Andean plant with high nutritional and therapeutic properties. Here, we used computer- and physicochemical-based strategies and designed four peptides derived from the primary structure of Chenopodin. Two peptides reproduce natural fragments of 14 amino acids from Chenopodin, named Chen1 and Chen2, and two engineered peptides of the same length were designed based on the Chen1 sequence. The two amino acids of Chen1 containing amide side chains were replaced by arginine (ChenR) or tryptophan (ChenW) to generate engineered cationic and hydrophobic peptides. The evaluation of these 14-mer peptides on Staphylococcus aureus and Escherichia coli showed that Chen1 does not have antibacterial activity up to 512 µM against these strains, while other peptides exhibited antibacterial effects at lower concentrations. The chemical substitutions of glutamine and asparagine by amino acids with cationic or aromatic side chains significantly favoured their antibacterial effects. These peptides did not show significant hemolytic activity. The fluorescence microscopy analysis highlighted the membranolytic nature of Chenopodin-derived peptides. Using molecular dynamic simulations, we found that a pore is formed when multiple peptides are assembled in the membrane. Whereas, some of them form secondary structures when interacting with the membrane, allowing water translocations during the simulations. Finally, Chen2 and ChenR significantly reduced SARS-CoV-2 infection. These findings demonstrate that Chenopodin is a highly useful template for the design, engineering, and manufacturing of non-toxic, antibacterial, and antiviral peptides.

2.
Microb Cell Fact ; 14: 87, 2015 Jun 16.
Article in English | MEDLINE | ID: mdl-26077335

ABSTRACT

BACKGROUND: Biodiesel industry wastes were evaluated as supplements for lipase production by Moniliella spathulata R25L270, which is newly identified yeast with great lipolytic potential. Macaúba cake (MC), used for the first time in this work as inducer to produce lipases, and residual oil (RO) were mixed to maximise enzyme production. The lipase secreted was biochemically characterised. RESULTS: The best ratio for the mixture (MC:RO) was 0.66:0.34 and the fitted values for lipase activity and total protein concentration were 0.98 U mL(-1) and 0.356 mg mL(-1), respectively. Maximum activity obtained (2.47 U mL(-1)) was achieved at 31.5°C and pH 6.7, and the enzyme was stable in this condition. A novel enzyme was purified and identified for the first time by mass spectrometry. The lipase efficiently hydrolysed different natural oils and exhibited selectivity in the production of eicosapentaenoic acid from fish oil. CONCLUSION: The use of MC and RO as a supplement to produce the new lipase from M. spathulata R25L270 may be one alternative for reducing lipase production costs and simultaneously adding value to biodiesel industry residues. The potential application of the lipase in the oleochemical industry was demonstrated by its pH and temperature stabilities and selective hydrolysis.


Subject(s)
Arecaceae/metabolism , Basidiomycota/enzymology , Biofuels/analysis , Fungal Proteins/biosynthesis , Industrial Microbiology/methods , Lipase/biosynthesis , Waste Products/analysis , Arecaceae/chemistry , Basidiomycota/genetics , Basidiomycota/metabolism , Culture Media/chemistry , Culture Media/metabolism , Fermentation , Fungal Proteins/genetics , Industrial Microbiology/economics , Industrial Microbiology/instrumentation , Lipase/genetics , Plant Oils/metabolism
3.
Appl Microbiol Biotechnol ; 98(8): 3829-40, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24535257

ABSTRACT

The conversion of lignocellulose into fermentable sugars is considered a promising alternative for increasing ethanol production. Higher fermentation yield has been achieved through the process of simultaneous saccharification and fermentation (SSF). In this study, a comparison was performed between the yeast species Saccharomyces cerevisiae and Kluyveromyces marxianus for their potential use in SSF process. Three strains of S. cerevisiae were evaluated: two are widely used in the Brazilian ethanol industry (CAT-1 and PE-2), and one has been isolated based on its capacity to grow and ferment at 42 °C (LBM-1). In addition, we used thermotolerant strains of K. marxianus. Two strains were obtained from biological collections, ATCC 8554 and CCT 4086, and one strain was isolated based on its fermentative capacity (UFV-3). SSF experiments revealed that S. cerevisiae industrial strains (CAT-1 and PE-2) have the potential to produce cellulosic ethanol once ethanol had presented yields similar to yields from thermotolerant strains. The industrial strains are more tolerant to ethanol and had already been adapted to industrial conditions. Moreover, the study shows that although the K. marxianus strains have fermentative capacities similar to strains of S. cerevisiae, they have low tolerance to ethanol. This characteristic is an important target for enhancing the performance of this yeast in ethanol production.


Subject(s)
Cellulose/metabolism , Ethanol/metabolism , Industrial Microbiology , Kluyveromyces/metabolism , Saccharomyces cerevisiae/metabolism , Brazil , Drug Tolerance , Ethanol/toxicity , Fermentation , Kluyveromyces/growth & development , Saccharomyces cerevisiae/growth & development
4.
Appl Biochem Biotechnol ; 172(5): 2412-24, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24390854

ABSTRACT

An extracellular ß-glucanase secreted by Kluyveromyces marxianus was identified for the first time. The optimal conditions for the production of this enzyme were evaluated by response surface methodology. The optimal conditions to produce ß-glucanase were a glucose concentration of 4% (w/v), a pH of 5.5, and an incubation temperature of 35 °C. Response surface methodology was also used to determine the pH and temperature required for the optimal enzymatic activity. The highest enzyme activity was obtained at a pH of 5.5 and a temperature of 55 °C. Furthermore, the enzyme was partially purified and sequenced, and its specificity for different substrates was evaluated. The results suggest that the enzyme is an endo-ß-1,3(4)-glucanase. After optimizing the conditions for ß-glucanase production, the culture supernatant was found to be effective in digesting the cell wall of the yeast Saccharomyces cerevisiae, showing the great potential of ß-glucanase in the biotechnological production of soluble ß-glucan.


Subject(s)
Fungal Proteins/biosynthesis , Glycoside Hydrolases/biosynthesis , Kluyveromyces/enzymology , beta-Glucans/metabolism , Amino Acid Sequence , Cell Wall/metabolism , Factor Analysis, Statistical , Fermentation , Fungal Proteins/metabolism , Glucose/metabolism , Glycoside Hydrolases/metabolism , Hydrogen-Ion Concentration , Kinetics , Molecular Sequence Data , Saccharomyces cerevisiae/chemistry , Sequence Alignment , Substrate Specificity , Temperature
5.
Bioresour Technol ; 109: 63-9, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22285296

ABSTRACT

Ethanol can be produced from cellulosic biomass in a process known as simultaneous saccharification and fermentation (SSF). The presence of yeast together with the cellulolytic enzyme complex reduces the accumulation of sugars within the reactor, increasing the ethanol yield and saccharification rate. This paper reports the isolation of Saccharomyces cerevisiae LBM-1, a strain capable of growth at 42 °C. In addition, S. cerevisiae LBM-1 and Kluyveromyces marxianus UFV-3 were able to ferment sugar cane bagasse in SSF processes at 37 and 42 °C. Higher ethanol yields were observed when fermentation was initiated after presaccharification at 50°C than at 37 or 42° C. Furthermore, the volumetric productivity of fermentation increased with presaccharification time, from 0.43 g/L/h at 0 h to 1.79 g/L/h after 72 h of presaccharification. The results suggest that the use of thermotolerant yeasts and a presaccharification stage are key to increasing yields in this process.


Subject(s)
Biotechnology/methods , Carbohydrate Metabolism , Ethanol/metabolism , Fermentation/physiology , Saccharum/chemistry , Temperature , Yeasts/metabolism , Cellulose/chemistry , Glucose/metabolism , Hydrolysis , Kluyveromyces/cytology , Kluyveromyces/growth & development , Kluyveromyces/metabolism , Saccharomyces cerevisiae/cytology , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae/metabolism , Time Factors , Yeasts/cytology , Yeasts/growth & development
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