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1.
J Med Educ Curric Dev ; 10: 23821205231191903, 2023.
Article in English | MEDLINE | ID: mdl-37538105

ABSTRACT

OBJECTIVE: This study aimed to analyze the impact of community service on the mental health of medical students through their perception of stress. METHODS: The 10-item Perceived Stress Scale was used to measure the stress levels of 82 medical students over a 3-month period. Additional survey questions gauged students' weekly volunteer experiences in clinical and nonclinical settings and their perceived effects on stress and quality of life. RESULTS: Results found an inverse relationship between the number of clinical volunteer hours and perceived stress (P = .0497). Nonclinical and total volunteer hours were correlated with both reduced perceived stress levels (nonclinical P = .0095, total P = .0052) and better quality of life (nonclinical P = .0301, total P = .0136). All individual perceived stress scores fell into the low or moderate stress ranges of the Perceived Stress Scale per the week-to-week analysis. CONCLUSION: The preliminary results raised important research questions about the impact of volunteering on medical student perceived stress. As medical students face higher levels of stress in comparison to the general population, it is exceedingly important to determine methods to decrease their risk of compromising their mental health. This study may aid in decision-making and research in favor of or against offering community service opportunities as part of the core medical education curriculum.

2.
J Exp Biol ; 225(6)2022 03 15.
Article in English | MEDLINE | ID: mdl-35224637

ABSTRACT

Echinoderms, such as sea urchins, occupy an interesting position in animal phylogeny in that they are genetically closer to vertebrates than the vast majority of all other invertebrates but have a nervous system that lacks a brain or brain-like structure. Despite this, very little is known about the neurobiology of the adult sea urchin, and how the nervous system is utilized to produce behavior. Here, we investigated effects on the righting response of antagonists of ionotropic receptors for the neurotransmitters acetylcholine, GABA and glycine, and antagonists of metabotropic receptors for the amines dopamine and noradrenaline (norepinephrine). Antagonists slowed the righting response in a dose-dependent manner, with a rank order of potency of strychnine>haloperidol>propranolol>bicuculline>hexamethonium, with RT50 values (concentrations that slowed righting time by 50%) ranging from 4.3 µmol l-1 for strychnine to 7.8 mmol l-1 for hexamethonium. The results also showed that both glycine and adrenergic receptors are needed for actual tube foot movement, and this may explain the slowed righting seen when these receptors were inhibited. Conversely, inhibition of dopamine receptors slowed the righting response but had no effect on tube foot motility, indicating that these receptors play roles in the neural processing involved in the righting behavior, rather than the actual physical righting. Our results identify the first effects of inhibiting the glycinergic, dopaminergic and adrenergic neurotransmitter systems in adult sea urchins and distinguish between the ability of sea urchins to right themselves and their ability to move their tube feet.


Subject(s)
Sea Urchins , Strychnine , Animals , Dopamine , Echinodermata , Hexamethonium , Norepinephrine , Receptors, Dopamine
3.
Nucleic Acids Res ; 44(10): 4703-20, 2016 06 02.
Article in English | MEDLINE | ID: mdl-26912830

ABSTRACT

The transcriptional shift from repression to activation of target genes is crucial for the fidelity of Notch responses through incompletely understood mechanisms that likely involve chromatin-based control. To activate silenced genes, repressive chromatin marks are removed and active marks must be acquired. Histone H3 lysine-4 (H3K4) demethylases are key chromatin modifiers that establish the repressive chromatin state at Notch target genes. However, the counteracting histone methyltransferase required for the active chromatin state remained elusive. Here, we show that the RBP-J interacting factor SHARP is not only able to interact with the NCoR corepressor complex, but also with the H3K4 methyltransferase KMT2D coactivator complex. KMT2D and NCoR compete for the C-terminal SPOC-domain of SHARP. We reveal that the SPOC-domain exclusively binds to phosphorylated NCoR. The balance between NCoR and KMT2D binding is shifted upon mutating the phosphorylation sites of NCoR or upon inhibition of the NCoR kinase CK2ß. Furthermore, we show that the homologs of SHARP and KMT2D in Drosophila also physically interact and control Notch-mediated functions in vivo Together, our findings reveal how signaling can fine-tune a committed chromatin state by phosphorylation of a pivotal chromatin-modifier.


Subject(s)
Chromatin/metabolism , Co-Repressor Proteins/metabolism , Gene Expression Regulation , Myeloid-Lymphoid Leukemia Protein/metabolism , Nuclear Proteins/metabolism , Receptors, Notch/metabolism , Transcription, Genetic , Animals , Casein Kinase II/metabolism , Cell Line , Cell Line, Tumor , DNA-Binding Proteins , Drosophila Proteins/genetics , Drosophila Proteins/metabolism , Histone Code , Histone-Lysine N-Methyltransferase , Homeodomain Proteins/chemistry , Homeodomain Proteins/metabolism , Humans , Mice , Nuclear Proteins/chemistry , Phosphorylation , Protein Interaction Domains and Motifs , RNA-Binding Proteins , Xenopus laevis
4.
EBioMedicine ; 2(12): 1932-43, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26844272

ABSTRACT

BCL9/9L proteins enhance the transcriptional output of the ß-catenin/TCF transcriptional complex and contribute critically to upholding the high WNT signaling level required for stemness maintenance in the intestinal epithelium. Here we show that a BCL9/9L-dependent gene signature derived from independent mouse colorectal cancer (CRC) models unprecedentedly separates patient subgroups with regard to progression free and overall survival. We found that this effect was by and large attributable to stemness related gene sets. Remarkably, this signature proved associated with recently described poor prognosis CRC subtypes exhibiting high stemness and/or epithelial-to-mesenchymal transition (EMT) traits. Consistent with the notion that high WNT signaling is required for stemness maintenance, ablating Bcl9/9l-ß-catenin in murine oncogenic intestinal organoids provoked their differentiation and completely abrogated their tumorigenicity, while not affecting their proliferation. Therapeutic strategies aimed at targeting WNT responses may be limited by intestinal toxicity. Our findings suggest that attenuating WNT signaling to an extent that affects stemness maintenance without disturbing intestinal renewal might be well tolerated and prove sufficient to reduce CRC recurrence and dramatically improve disease outcome.


Subject(s)
Colorectal Neoplasms/metabolism , Colorectal Neoplasms/mortality , Neoplasm Proteins/metabolism , Signal Transduction , beta Catenin/metabolism , Animals , Cell Transformation, Neoplastic/genetics , Cell Transformation, Neoplastic/metabolism , Cluster Analysis , Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , Datasets as Topic , Disease Models, Animal , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Gene Knockout Techniques , Humans , Mice , Mice, Knockout , Neoplasm Proteins/antagonists & inhibitors , Neoplasm Proteins/genetics , Neoplastic Stem Cells/metabolism , Phenotype , Prognosis , Sequence Deletion , Transcription Factors , Transcriptome , beta Catenin/antagonists & inhibitors , beta Catenin/genetics
5.
Genes Dev ; 24(6): 590-601, 2010 Mar 15.
Article in English | MEDLINE | ID: mdl-20231316

ABSTRACT

Timely acquisition of cell fates and the elaborate control of growth in numerous organs depend on Notch signaling. Upon ligand binding, the core transcription factor RBP-J activates transcription of Notch target genes. In the absence of signaling, RBP-J switches off target gene expression, assuring the tight spatiotemporal control of the response by a mechanism incompletely understood. Here we show that the histone demethylase KDM5A is an integral, conserved component of Notch/RBP-J gene silencing. Methylation of histone H3 Lys 4 is dynamically erased and re-established at RBP-J sites upon inhibition and reactivation of Notch signaling. KDM5A interacts physically with RBP-J; this interaction is conserved in Drosophila and is crucial for Notch-induced growth and tumorigenesis responses.


Subject(s)
Immunoglobulin J Recombination Signal Sequence-Binding Protein/metabolism , Receptors, Notch/metabolism , Retinoblastoma-Binding Protein 2/metabolism , Signal Transduction , Animals , Cell Line , Cell Line, Tumor , DNA-Binding Proteins/metabolism , Drosophila Proteins/metabolism , Drosophila melanogaster , Histones/metabolism , Humans , Jumonji Domain-Containing Histone Demethylases , Mice , T-Lymphocytes , Ubiquitin-Protein Ligases
6.
Presse Med ; 38(7-8): 1106-9, 2009.
Article in French | MEDLINE | ID: mdl-19282131

ABSTRACT

Airport malaria is a particular form of autochthonous malaria: it happens when the Plasmodium infected Anopheles genus mosquito travels from an endemic area to a malaria free airport. Since 1969, 30 cases of airport malaria have been reported in France, 2 during summer 2008. The severity of airport malaria is explained by the frequency of Plasmodium falciparum infecting non immune individuals and an often important diagnosis delay. It is a compulsory notification disease in France. The International Health Regulations (IHR) require states to check that airplanes coming from malaria or arboviral endemic area are systematically disinsected. Vector control measures have to be implemented within a distance of at least 400 meters around the perimeter of airports in malaria or arboviral endemic areas. In France, this measure applies to all airports of French overseas territories, except for the island of Saint-Pierre and Miquelon.


Subject(s)
Aviation , Malaria/prevention & control , Animals , Anopheles/parasitology , Female , Humans , Malaria/microbiology , Malaria/parasitology , Male , Plasmodium falciparum/isolation & purification
7.
Mol Cell Proteomics ; 6(5): 820-34, 2007 May.
Article in English | MEDLINE | ID: mdl-17296600

ABSTRACT

Ring1B/Rnf2 is a RING finger protein member of the Polycomb group (PcG) of proteins, which form chromatin-modifying complexes essential for embryonic development and stem cell renewal and which are commonly deregulated in cancer. Ring1B/Rnf2 is a ubiquitin E3 ligase that catalyzes the monoubiquitylation of the histone H2A, one of the histone modifications needed for the transcriptional repression activity of the PcG of proteins. Ring1B/Rnf2 was shown to be part of two complexes, the PRC1 PcG complex and the E2F6.com-1 complex, which also contains non-PcG members, thus raising the prospect for additional Ring1B/Rnf2 partners and functions extending beyond the PcG. Here we used a high throughput proteomics approach based on the single step purification, using streptavidin beads, of in vivo biotinylated Ring1B/Rnf2 and associated proteins from a nuclear extract from erythroid cells and their identification by mass spectrometry. About 50 proteins were confidently identified of which 20 had not been identified previously as subunits of Ring1B/Rnf2 complexes. We found that histone demethylases LSD1/Aof2 and Fbxl10/Jhdm1B, casein kinase subunits, and the BcoR corepressor were among the new interactors identified. We also isolated an Fbxl10/Jhdm1B complex by biotinylation tagging to identify shared interacting partners with Ring1B/Rnf2. In this way we identified a novel Ring1B-Fbxl10 complex that also includes Bcl6 corepressor (BcoR), CK2alpha, Skp1, and Nspc1/Pcgf1. The putative enzymatic activities and protein interaction and chromatin binding motifs present in this novel Ring1B-Fbxl10 complex potentially provide additional mechanisms for chromatin modification/recruitment to chromatin and more evidence for Ring1B/Rnf2 activities beyond those typically associated with PcG function. Lastly this work demonstrates the utility of biotinylation tagging for the rapid characterization of complex mixtures of multiprotein complexes achieved through the iterative use of this simple yet high throughput proteomics approach.


Subject(s)
DNA-Binding Proteins/metabolism , F-Box Proteins/metabolism , Proteomics , Animals , Biotinylation/methods , Cell Line, Tumor , Erythroid Cells/chemistry , Jumonji Domain-Containing Histone Demethylases , Mass Spectrometry , Mice , Multiprotein Complexes , Polycomb Repressive Complex 1 , Protein Binding , Proto-Oncogene Proteins c-bcl-6 , Repressor Proteins , Transfection , Ubiquitin-Protein Ligases
8.
Proc Natl Acad Sci U S A ; 103(49): 18504-9, 2006 Dec 05.
Article in English | MEDLINE | ID: mdl-17132730

ABSTRACT

The Mediator complex forms the bridge between transcriptional activators and RNA polymerase II. Mediator subunit Med1/TRAP220 is a key component of Mediator originally found to associate with nuclear hormone receptors. Med1 deficiency causes lethality at embryonic day 11.5 because of defects in heart and placenta development. Here we show that Med1-deficient 10.5 days postcoitum embryos are anemic but have normal numbers of hematopoietic progenitor cells. Med1-deficient progenitor cells have a defect in forming erythroid burst-forming units (BFU-E) and colony-forming units (CFU-E), but not in forming myeloid colonies. At the molecular level, we demonstrate that Med1 interacts physically with the erythroid master regulator GATA-1. In transcription assays, Med1 deficiency leads to a defect in GATA-1-mediated transactivation. In chromatin immunoprecipitation experiments, we find Mediator components at GATA-1-occupied enhancer sites. Thus, we conclude that Mediator subunit Med1 acts as a pivotal coactivator for GATA-1 in erythroid development.


Subject(s)
Endodeoxyribonucleases/physiology , Erythropoiesis/physiology , GATA1 Transcription Factor/physiology , Protein Subunits/physiology , Transcription Factors/physiology , Animals , Cell Line , Embryonic Stem Cells/metabolism , Endodeoxyribonucleases/deficiency , Endodeoxyribonucleases/genetics , Erythroid Precursor Cells/cytology , Mediator Complex Subunit 1 , Mice , Mice, Knockout , Proto-Oncogene Proteins c-kit/metabolism , Transcription Factors/deficiency , Transcription Factors/genetics
9.
Development ; 133(24): 4913-23, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17108004

ABSTRACT

Ldb1, a ubiquitously expressed LIM domain binding protein, is essential in a number of tissues during development. It interacts with Gata1, Tal1, E2A and Lmo2 to form a transcription factor complex regulating late erythroid genes. We identify a number of novel Ldb1 interacting proteins in erythroleukaemic cells, in particular the repressor protein Eto-2 (and its family member Mtgr1), the cyclin-dependent kinase Cdk9, and the bridging factor Lmo4. MO-mediated knockdowns in zebrafish show these factors to be essential for definitive haematopoiesis. In accordance with the zebrafish results these factors are coexpressed in prehaematopoietic cells of the early mouse embryo, although we originally identified the complex in late erythroid cells. Based on the change in subcellullar localisation of Eto-2 we postulate that it plays a central role in the transition from the migration and expansion phase of the prehaematopoietic cells to the establishment of definitive haematopoietic stem cells.


Subject(s)
DNA-Binding Proteins/metabolism , Embryo, Mammalian/metabolism , Embryo, Nonmammalian , Erythropoiesis/genetics , Hematopoietic Stem Cells/metabolism , Zebrafish Proteins/metabolism , Adaptor Proteins, Signal Transducing , Animals , Cell Differentiation , Cell Line, Tumor , Chromatin Immunoprecipitation , Cyclin-Dependent Kinase 9/metabolism , Erythroid Cells/cytology , Homeodomain Proteins/metabolism , LIM Domain Proteins , Leukemia, Erythroblastic, Acute , Mice , Nuclear Proteins/metabolism , Protein Binding , Repressor Proteins/metabolism , Transcription Factor 4 , Transcription Factors/metabolism , Transfection , Zebrafish
10.
Methods Mol Biol ; 338: 305-23, 2006.
Article in English | MEDLINE | ID: mdl-16888367

ABSTRACT

Efficient tagging methodologies are an integral aspect of protein complex characterization by proteomic approaches. Owing to the very high affinity of biotin for avidin and streptavidin, biotinylation tagging offers an attractive approach for the efficient purification of protein complexes. The very high affinity of the biotin/(strept)avidin system also offers the potential for the single-step capture of lower abundance protein complexes, such as transcription factor complexes. The identification of short peptide tags that are efficiently biotinylated by the bacterial BirA biotin ligase led to an approach for the single-step purification of transcription factor complexes by specific in vivo biotinylation tagging. A short sequence tag fused N-terminally to the transcription factor of interest is very efficiently biotinylated by BirA coexpressed in the same cells, as was demonstrated by the tagging of the essential hematopoietic transcription factor GATA-1. The direct binding to streptavidin of biotinylated GATA-1 in nuclear extracts resulted in the single-step capture of the tagged factor and associated proteins, which were eluted and identified by mass spectrometry. This led to the characterization of several distinct GATA-1 complexes with other transcription factors and chromatin remodeling cofactors, which are involved in activation and repression of gene targets. Thus, BirA-mediated tagging is an efficient approach for the direct capture and characterization of transcription factor complexes.


Subject(s)
Transcription Factors/chemistry , Transcription Factors/isolation & purification , Amino Acid Sequence , Animals , Biotin , Blotting, Western , Carbon-Nitrogen Ligases , Cell Line , Chromatography, Agarose , Electrophoresis, Polyacrylamide Gel , Endopeptidases , Escherichia coli Proteins , GATA1 Transcription Factor/chemistry , GATA1 Transcription Factor/genetics , GATA1 Transcription Factor/isolation & purification , Mass Spectrometry , Mice , Molecular Sequence Data , Multiprotein Complexes , Proteomics/methods , Repressor Proteins , Sepharose , Streptavidin
11.
EMBO J ; 25(2): 357-66, 2006 Jan 25.
Article in English | MEDLINE | ID: mdl-16407974

ABSTRACT

The passage from proliferation to terminal differentiation is critical for normal development and is often perturbed in malignancies. To define the molecular mechanisms that govern this process during erythropoiesis, we have used tagging/proteomics approaches and characterized protein complexes nucleated by TAL-1/SCL, a basic helix-loop-helix transcription factor that specifies the erythrocytic lineage. In addition to known TAL-1 partners, GATA-1, E2A, HEB, LMO2 and Ldb1, we identify the ETO2 repressor as a novel component recruited to TAL-1 complexes through interaction with E2A/HEB. Ectopic expression and siRNA knockdown experiments in hematopoietic progenitor cells show that ETO2 actively represses erythroid TAL-1 target genes and governs the expansion of erythroid progenitors. At the onset of erythroid differentiation, a change in the stoichiometry of ETO2 within the TAL-1 complex activates the expression of known erythroid-specific TAL-1 target genes and of Gfi-1b and p21(Cip), encoding two essential regulators of erythroid cell proliferation. These results suggest that the dynamics of ETO2 recruitment within nuclear complexes couple cell proliferation to cell differentiation and determine the onset of terminal erythroid maturation.


Subject(s)
Basic Helix-Loop-Helix Transcription Factors/metabolism , Cell Differentiation/physiology , Cell Proliferation , Erythropoiesis/physiology , Gene Expression Regulation, Developmental , Nuclear Proteins/physiology , Proto-Oncogene Proteins/metabolism , Transcription Factors/physiology , Animals , Cell Line , Chromatin Immunoprecipitation , Flow Cytometry , Green Fluorescent Proteins , Hematopoietic Stem Cells/metabolism , Immunoblotting , Immunoprecipitation , Mice , Nuclear Proteins/metabolism , RNA, Small Interfering/metabolism , Repressor Proteins , T-Cell Acute Lymphocytic Leukemia Protein 1 , Transcription Factors/metabolism
12.
Ann N Y Acad Sci ; 1054: 55-67, 2005.
Article in English | MEDLINE | ID: mdl-16339652

ABSTRACT

We have described the application of a simple biotinylation tagging approach for the direct purification of tagged transcription factor complexes, based on the use of artificial short peptide tags that are specifically and efficiently biotinylated by the bacterial BirA biotin ligase, which is co-expressed in cells with the tagged factor. We used this approach to initially characterize complexes formed by the hematopoietic transcription factor GATA-1 in erythroid cells. GATA-1 is essential for the erythroid differentiation, its functions encompassing upregulation of erythroid genes, repression of alternative transcription programs, and suppression of cell proliferation. However, it was not clear how all of these GATA-1 functions are mediated. Our work describes, for the first time, distinct GATA-1 interactions with the essential hematopoietic factor Gfi-1b, the repressive MeCP1 complex, and the chromatin remodeling ACF/WCRF complex, in addition to the known GATA-1/FOG-1 and GATA-1/TAL-1 complexes. We also provide evidence that distinct GATA-1 complexes are associated with specific GATA-1 functions in erythroid differentiation, for example, GATA-1/Gfi-1b with the suppression of cell proliferation and GATA-1/FOG-1/MeCP1 with the repression of other hematopoietic transcription programs. We next applied the biotinylation tag to Ldb-1, a known partner of GATA-1, and characterized a number of novel interaction partners that are essential in erythroid development, in particular, Eto-2, Lmo4, and CdK9. Last, we are in the process of applying the same technology to characterize the factors that are bound to the suppressed gamma-globin promoter in vivo.


Subject(s)
Biotinylation , Blood Proteins/isolation & purification , GATA1 Transcription Factor/physiology , Mass Spectrometry/methods , Nuclear Proteins/isolation & purification , Transcription Factors/isolation & purification , Animals , Blood Proteins/biosynthesis , Blood Proteins/genetics , Blood Proteins/physiology , Carbon-Nitrogen Ligases/pharmacology , Cell Differentiation/genetics , Cell Line, Tumor , Cell Nucleus/chemistry , Erythroid Cells/chemistry , Escherichia coli Proteins/pharmacology , Gene Expression Regulation, Developmental , Globins/biosynthesis , Globins/genetics , Hematopoiesis/genetics , Leukemia, Erythroblastic, Acute/pathology , Macromolecular Substances , Mice , Nuclear Proteins/physiology , Protein Interaction Mapping , Repressor Proteins/pharmacology , Transcription Factors/pharmacology , Transcription Factors/physiology , Zebrafish/blood , Zebrafish/embryology
13.
Mol Cell Biol ; 25(23): 10235-50, 2005 Dec.
Article in English | MEDLINE | ID: mdl-16287841

ABSTRACT

Lineage specification and cellular maturation require coordinated regulation of gene expression programs. In large part, this is dependent on the activator and repressor functions of protein complexes associated with tissue-specific transcriptional regulators. In this study, we have used a proteomic approach to characterize multiprotein complexes containing the key hematopoietic regulator SCL in erythroid and megakaryocytic cell lines. One of the novel SCL-interacting proteins identified in both cell types is the transcriptional corepressor ETO-2. Interaction between endogenous proteins was confirmed in primary cells. We then showed that SCL complexes are shared but also significantly differ in the two cell types. Importantly, SCL/ETO-2 interacts with another corepressor, Gfi-1b, in red cells but not megakaryocytes. The SCL/ETO-2/Gfi-1b association is lost during erythroid differentiation of primary fetal liver cells. Genetic studies of erythroid cells show that ETO-2 exerts a repressor effect on SCL target genes. We suggest that, through its association with SCL, ETO-2 represses gene expression in the early stages of erythroid differentiation and that alleviation/modulation of the repressive state is then required for expression of genes necessary for terminal erythroid maturation to proceed.


Subject(s)
Basic Helix-Loop-Helix Transcription Factors/metabolism , Erythroid Cells/metabolism , Erythropoiesis , Megakaryocytes/metabolism , Nuclear Proteins/metabolism , Proto-Oncogene Proteins/metabolism , Repressor Proteins/metabolism , Transcription Factors/metabolism , Animals , Basic Helix-Loop-Helix Transcription Factors/genetics , Cell Differentiation , Cells, Cultured , Erythroid Cells/cytology , Gene Expression Regulation , Mice , Mutation/genetics , Nuclear Proteins/genetics , Protein Binding , Proto-Oncogene Proteins/genetics , Regulatory Sequences, Nucleic Acid , Repressor Proteins/genetics , T-Cell Acute Lymphocytic Leukemia Protein 1 , Transcription Factors/genetics , Transcription, Genetic/genetics
14.
EMBO J ; 24(13): 2354-66, 2005 Jul 06.
Article in English | MEDLINE | ID: mdl-15920471

ABSTRACT

GATA-1 is essential for the generation of the erythroid, megakaryocytic, eosinophilic and mast cell lineages. It acts as an activator and repressor of different target genes, for example, in erythroid cells it represses cell proliferation and early hematopoietic genes while activating erythroid genes, yet it is not clear how both of these functions are mediated. Using a biotinylation tagging/proteomics approach in erythroid cells, we describe distinct GATA-1 interactions with the essential hematopoietic factor Gfi-1b, the repressive MeCP1 complex and the chromatin remodeling ACF/WCRF complex, in addition to the known GATA-1/FOG-1 and GATA-1/TAL-1 complexes. Importantly, we show that FOG-1 mediates GATA-1 interactions with the MeCP1 complex, thus providing an explanation for the overlapping functions of these two factors in erythropoiesis. We also show that subsets of GATA-1 gene targets are bound in vivo by distinct complexes, thus linking specific GATA-1 partners to distinct aspects of its functions. Based on these findings, we suggest a model for the different roles of GATA-1 in erythroid differentiation.


Subject(s)
DNA-Binding Proteins/metabolism , Erythroid Cells/metabolism , Repressor Proteins/metabolism , Transcription Factors/metabolism , Animals , Basic Helix-Loop-Helix Transcription Factors , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cells, Cultured , DNA-Binding Proteins/genetics , Erythroid-Specific DNA-Binding Factors , GATA1 Transcription Factor , HeLa Cells , Histone Deacetylases/genetics , Histone Deacetylases/metabolism , Humans , Mice , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Protein Binding , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins/metabolism , Repressor Proteins/genetics , T-Cell Acute Lymphocytic Leukemia Protein 1 , Transcription Factors/genetics , Transcription, Genetic , Zinc Fingers
15.
Proc Natl Acad Sci U S A ; 100(13): 7480-5, 2003 Jun 24.
Article in English | MEDLINE | ID: mdl-12802011

ABSTRACT

Proteomic approaches require simple and efficient protein purification methodologies that are amenable to high throughput. Biotinylation is an attractive approach for protein complex purification due to the very high affinity of avidin/streptavidin for biotinylated templates. Here, we describe an approach for the single-step purification of transcription factor complex(es) based on specific in vivo biotinylation. We expressed the bacterial BirA biotin ligase in mammalian cells and demonstrated very efficient biotinylation of a hematopoietic transcription factor bearing a small (23-aa) artificial peptide tag. Biotinylation of the tagged transcription factor altered neither the factor's protein interactions or DNA binding properties in vivo nor its subnuclear distribution. Using this approach, we isolated the biotin-tagged transcription factor and at least one other known interacting protein from crude nuclear extracts by direct binding to streptavidin beads. Finally, this method works efficiently in transgenic mice, thus raising the prospect of using biotinylation tagging in protein complex purification directly from animal tissues. Therefore, BirA-mediated biotinylation of tagged proteins provides the basis for the single-step purification of proteins from mammalian cells.


Subject(s)
Biotinylation , Molecular Biology/methods , Animals , Cell Nucleus/metabolism , Chromatin/metabolism , Escherichia coli/metabolism , Immunoblotting , Mice , Mice, Transgenic , Models, Genetic , Protein Binding , Streptavidin/pharmacology , Transcription Factors/metabolism , Transfection , Tumor Cells, Cultured
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