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1.
Gastrointest Endosc ; 89(2): 311-319.e1, 2019 02.
Article in English | MEDLINE | ID: mdl-30179609

ABSTRACT

BACKGROUND AND AIMS: Postoperative pancreatic leakage and fistulae (POPF) are a leading adverse event after partial pancreatic resection. Treatment algorithms are currently not standardized. Evidence regarding the role of endoscopy is scarce. METHODS: One hundred ninety-six POPF patients with (n = 132) and without (n = 64) concomitant pancreatic fluid collections (PFCs) from centers in Berlin, Kiel, and Dresden were analyzed retrospectively. Clinical resolution was used as the primary endpoint of analysis. RESULTS: Analysis was stratified by the presence or absence of a PFC because these patients differed in treatment pathway and the presence of systemic inflammation with a median C-reactive protein of 30.7 mg/dL in patients without a PFC versus 131.0 mg/dL in patients with a PFC (P = 3.4 × 10-4). In patients with PFCs, EUS-guided intervention led to resolution in a median of 8 days as compared with 25 days for percutaneous drainage and 248 days for surgery (P = 3.75 × 10-14). There was a trend toward a higher success rate of EUS-guided intervention as a primary treatment modality with 85% (P = .034), followed by percutaneous drainage (64%) and surgery (41%). When applied as a rescue intervention (n = 24), EUS led to clinical resolution in 96% of cases. In patients without PFCs, EUS-guided internalization in a novel endoscopic technique led to resolution after a median of 4 days as compared with 51 days for a remaining surgical drainage (P = 9.3 × 10-9). CONCLUSIONS: In this retrospective analysis, EUS-guided drainage of POPF led to a more rapid resolution. EUS may be considered as a viable option in the management of PFCs and POPF and should be evaluated in prospective studies.


Subject(s)
Anastomotic Leak/surgery , Drainage/methods , Endoscopy, Digestive System/methods , Pancreatectomy , Pancreatic Fistula/surgery , Postoperative Complications/surgery , Aged , Endosonography , Female , Humans , Male , Middle Aged , Proportional Hazards Models , Retrospective Studies , Surgery, Computer-Assisted
2.
J Immunol Res ; 2017: 8394593, 2017.
Article in English | MEDLINE | ID: mdl-28638837

ABSTRACT

Helicobacter pylori infection shows a worldwide prevalence of around 50%. However, only a minority of infected individuals develop clinical symptoms or diseases. The presence of H. pylori virulence factors, such as CagA and VacA, has been associated with disease development, but assessment of virulence factor presence requires gastric biopsies. Here, we evaluate the H. pylori recomLine test for risk stratification of infected patients by comparing the test score and immune recognition of type I or type II strains defined by the virulence factors CagA, VacA, GroEL, UreA, HcpC, and gGT with patient's disease status according to histology. Moreover, the immune responses of eradicated individuals from two different populations were analysed. Their immune response frequencies and intensities against all antigens except CagA declined below the detection limit. CagA was particularly long lasting in both independent populations. An isolated CagA band often represents past eradication with a likelihood of 88.7%. In addition, a high recomLine score was significantly associated with high-grade gastritis, atrophy, intestinal metaplasia, and gastric cancer. Thus, the recomLine is a sensitive and specific noninvasive test for detecting serum responses against H. pylori in actively infected and eradicated individuals. Moreover, it allows stratifying patients according to their disease state.


Subject(s)
Gastritis/immunology , Gastritis/microbiology , Helicobacter Infections/immunology , Helicobacter Infections/microbiology , Helicobacter pylori/pathogenicity , Immunoassay/methods , Adolescent , Adult , Aged , Aged, 80 and over , Antigens, Bacterial/immunology , Antigens, Bacterial/isolation & purification , Bacterial Proteins/immunology , Bacterial Proteins/isolation & purification , Biopsy , Female , Gastritis/blood , Gastritis/diagnosis , Helicobacter Infections/complications , Helicobacter Infections/diagnosis , Helicobacter pylori/classification , Helicobacter pylori/immunology , Helicobacter pylori/isolation & purification , Humans , Male , Middle Aged , Sensitivity and Specificity , Serologic Tests/methods , Stomach/microbiology , Stomach/pathology , Stomach Neoplasms/etiology , Stomach Neoplasms/microbiology , Virulence Factors/blood , Young Adult
3.
Mol Biol Cell ; 24(21): 3285-91, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24174463

ABSTRACT

We present a look at what it is like to be a professor at a small college: one professor at Grinnell College, one at Oberlin College, and one at Whitman College.


Subject(s)
Faculty , Science , Universities , Female , Humans , Iowa , Male , Ohio , Research , Students , Teaching , Washington
4.
Clin Vaccine Immunol ; 20(11): 1703-10, 2013 Nov.
Article in English | MEDLINE | ID: mdl-24006137

ABSTRACT

Helicobacter pylori colonizes half of the world's population, and infection can lead to ulcers, gastric cancer, and mucosa-associated lymphoid tissue (MALT) lymphoma. Serology is the only test applicable for large-scale, population-based screening, but current tests are hampered by a lack of sensitivity and/or specificity. Also, no serologic test allows the differentiation of type I and type II strains, which is important for predicting the clinical outcome. H. pylori virulence factors have been associated with disease, but direct assessment of virulence factors requires invasive methods to obtain gastric biopsy specimens. Our work aimed at the development of a highly sensitive and specific, noninvasive serologic test to detect immune responses to important H. pylori virulence factors. This line immunoassay system (recomLine) is based on recombinant proteins. For this assay, six highly immunogenic virulence factors (CagA, VacA, GroEL, gGT, HcpC, and UreA) were expressed in Escherichia coli, purified, and immobilized to nitrocellulose membranes to detect serological immune responses in patient's sera. For the validation of the line assay, a cohort of 500 patients was screened, of which 290 (58.0%) were H. pylori negative and 210 (42.0%) were positive by histology. The assay showed sensitivity and specificity of 97.6% and 96.2%, respectively, compared to histology. In direct comparison to lysate blotting and enzyme-linked immunosorbent assay (ELISA), the recomLine assay had increased discriminatory power. For the assessment of individual risk for gastrointestinal disease, the test must be validated in a larger and defined patient cohort. Taking the data together, the recomLine assay provides a valuable tool for the diagnosis of H. pylori infection.


Subject(s)
Antibodies, Bacterial/blood , Antigens, Bacterial , Diagnostic Tests, Routine/methods , Helicobacter Infections/diagnosis , Helicobacter pylori/immunology , Virulence Factors , Adolescent , Adult , Aged , Aged, 80 and over , Escherichia coli/genetics , Female , Gene Expression , Humans , Immunoassay/methods , Male , Middle Aged , Recombinant Proteins , Sensitivity and Specificity , Young Adult
5.
Biophys J ; 95(5): 2470-86, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18502809

ABSTRACT

In the cytoskeleton, unfavorable nucleation steps allow cells to regulate where, when, and how many polymers assemble. Nucleated polymerization is traditionally explained by a model in which multistranded polymers assemble cooperatively, whereas linear, single-stranded polymers do not. Recent data on the assembly of FtsZ, the bacterial homolog of tubulin, do not fit either category. FtsZ can polymerize into single-stranded protofilaments that are stable in the absence of lateral interactions, but that assemble cooperatively. We developed a model for cooperative polymerization that does not require polymers to be multistranded. Instead, a conformational change allows subunits in oligomers to associate with high affinity, whereas a lower-affinity conformation is favored in monomers. We derive equations for calculating polymer concentrations, subunit conformations, and the apparent affinity of subunits for polymer ends. Certain combinations of equilibrium constants produce the sharp critical concentrations characteristic of cooperative polymerization. In these cases, the low-affinity conformation predominates in monomers, whereas virtually all polymers are composed of high-affinity subunits. Our model predicts that the three routes to forming HH dimers all involve unstable intermediates, limiting nucleation. The mathematical framework developed here can represent allosteric assembly systems with a variety of biochemical interpretations, some of which can show cooperativity, and others of which cannot.


Subject(s)
Bacterial Proteins/chemistry , Cytoskeletal Proteins/chemistry , Models, Chemical , Polymers/chemistry , Allosteric Regulation , Kinetics , Mathematics , Molecular Conformation , Thermodynamics
6.
Proc Natl Acad Sci U S A ; 101(32): 11821-6, 2004 Aug 10.
Article in English | MEDLINE | ID: mdl-15289600

ABSTRACT

FtsZ, the ancestral homolog of eukaryotic tubulins, is a GTPase that assembles into a cytokinetic ring structure essential for cell division in prokaryotic cells. Similar to tubulin, purified FtsZ polymerizes into dynamic protofilaments in the presence of GTP; polymer assembly is accompanied by GTP hydrolysis. We used a high-throughput protein-based chemical screen to identify small molecules that target assembly-dependent GTPase activity of FtsZ. Here, we report the identification of five structurally diverse compounds, named Zantrins, which inhibit FtsZ GTPase either by destabilizing the FtsZ protofilaments or by inducing filament hyperstability through increased lateral association. These two classes of FtsZ inhibitors are reminiscent of the antitubulin drugs colchicine and Taxol, respectively. We also show that Zantrins perturb FtsZ ring assembly in Escherichia coli cells and cause lethality to a variety of bacteria in broth cultures, indicating that FtsZ antagonists may serve as chemical leads for the development of new broad-spectrum antibacterial agents. Our results illustrate the utility of small-molecule chemical probes to study FtsZ polymerization dynamics and the feasibility of FtsZ as a novel therapeutic target.


Subject(s)
Bacterial Proteins/antagonists & inhibitors , Cytoskeletal Proteins/antagonists & inhibitors , Enzyme Inhibitors/pharmacology , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Biopolymers/antagonists & inhibitors , Drug Evaluation, Preclinical/methods , Enzyme Inhibitors/chemistry , Escherichia coli/drug effects , Escherichia coli/enzymology , Escherichia coli/growth & development , Mycobacterium tuberculosis/drug effects , Mycobacterium tuberculosis/enzymology , Mycobacterium tuberculosis/growth & development , Protein Conformation/drug effects , Structure-Activity Relationship
7.
Biochemistry ; 43(1): 282-8, 2004 Jan 13.
Article in English | MEDLINE | ID: mdl-14705956

ABSTRACT

FtsZ is a prokaryotic tubulin homologue that polymerizes into a dynamic ring during cell division. GTP binding and hydrolysis provide the energy for FtsZ dynamics. However, the precise role of hydrolysis in polymer assembly and turnover is not understood, limiting our understanding of how FtsZ functions in the cell. Here we investigate GTP hydrolysis during the FtsZ polymerization cycle using several complementary approaches that avoid technical caveats of previous studies. We find that at steady state approximately 80% of FtsZ polymer subunits are bound to GTP. In addition, we use pre-steady-state, single turnover assays to directly measure the rate of hydrolysis. Hydrolysis was found to occur at approximately 8/min and to be a rate-limiting step in GTP turnover; phosphate release rapidly followed. These results clarify previously conflicting results in the literature and suggest that pure FtsZ polymers, unlike microtubules, may not be able to undergo dynamic instability or to store energy in the polymer for force production.


Subject(s)
Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Cytoskeletal Proteins/chemistry , Cytoskeletal Proteins/metabolism , Guanosine Triphosphate/chemistry , Guanosine Triphosphate/metabolism , Tubulin/metabolism , Bacterial Proteins/ultrastructure , Cell Division , Cytoskeletal Proteins/ultrastructure , Guanine Nucleotides/chemistry , Guanine Nucleotides/metabolism , Guanosine Diphosphate/chemistry , Guanosine Diphosphate/metabolism , Hydrolysis , Polymers/chemistry , Polymers/metabolism , Protein Binding , Protein Subunits/chemistry , Protein Subunits/metabolism , Sugar Phosphates/chemistry , Sugar Phosphates/metabolism , Tubulin/chemistry
8.
Annu Rev Microbiol ; 57: 125-54, 2003.
Article in English | MEDLINE | ID: mdl-14527275

ABSTRACT

FtsZ is a prokaryotic tubulin homolog that assembles into a ring at the future site of cell division. The resulting "Z ring" forms the framework for the division apparatus, and its assembly is regulated throughout the bacterial cell cycle. A highly dynamic structure, the Z ring exhibits continual subunit turnover and the ability to rapidly assemble, disassemble, and, under certain circumstances, relocalize. These in vivo properties are ultimately due to FtsZ's capacity for guanosine triphosphate (GTP)-dependent, reversible polymerization. FtsZ polymer stability appears to be fine-tuned such that subtle changes in its assembly kinetics result in large changes in the Z ring structure. Thus, regulatory proteins that modulate FtsZ's assembly dynamics can cause the ring to rapidly remodel in response to developmental and environmental cues.


Subject(s)
Cell Cycle Proteins/metabolism , Escherichia coli Proteins/metabolism , Bacillus subtilis/metabolism , Bacillus subtilis/physiology , Cell Cycle Proteins/chemistry , Cell Division/physiology , Escherichia coli/metabolism , Escherichia coli/physiology , Escherichia coli Proteins/chemistry , GTP-Binding Proteins/chemistry , GTP-Binding Proteins/metabolism , Guanosine Triphosphate/metabolism , Protein Conformation
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