Machine learning to extract muscle fascicle length changes from dynamic ultrasound images in real-time.

BACKGROUND AND OBJECTIVE: Dynamic muscle fascicle length measurements through B-mode ultrasound have become popular for the non-invasive physiological insights they provide regarding musculoskeletal structure-function. However, current practices typically require time consuming post-processing to track muscle length changes from B-mode images. A real-time measurement tool would not only save processing time but would also help pave the way toward closed-loop applications based on feedback signals driven by in vivo muscle length change patterns. In this paper, we benchmark an approach that combines traditional machine learning (ML) models with B-mode ultrasound recordings to obtain muscle fascicle length changes in real-time. To gauge the utility of this framework for 'in-the-loop' applications, we evaluate accuracy of the extracted muscle length change signals against time-series' derived from a standard, post-hoc automated tracking algorithm. METHODS: We collected B-mode ultrasound data from the soleus muscle of six participants performing five defined ankle motion tasks: (a) seated, constrained ankle plantarflexion, (b) seated, free ankle dorsi/plantarflexion, (c) weight-bearing, calf raises (d) walking, and then a (e) mix. We trained machine learning (ML) models by pairing muscle fascicle lengths obtained from standardized automated tracking software (UltraTrack) with the respective B-mode ultrasound image input to the tracker, frame-by-frame. Then we conducted hyperparameter optimizations for five different ML models using a grid search to find the best performing parameters for a combination of high correlation and low RMSE between ML and UltraTrack processed muscle fascicle length trajectories. Finally, using the global best model/hyperparameter settings, we comprehensively evaluated training-testing outcomes within subject (i.e., train and test on same subject), cross subject (i.e., train on one subject, test on another) and within/direct cross task (i.e., train and test on same subject, but different task). RESULTS: Support vector machine (SVM) was the best performing model with an average r = 0.70 ±0.34 and average RMSE = 2.86 ±2.55 mm across all direct training conditions and average r = 0.65 ±0.35 and average RMSE = 3.28 ±2.64 mm when optimized for all cross-participant conditions. Comparisons between ML vs. UltraTrack (i.e., ground truth) tracked muscle fascicle length versus time data indicated that ML tracked images reliably capture the salient qualitative features in ground truth length change data, even when correlation values are on the lower end. Furthermore, in the direct training, calf raises condition, which is most comparable to previous studies validating automated tracking performance during isolated contractions on a dynamometer, our ML approach yielded 0.90 average correlation, in line with other accepted tracking methods in the field. CONCLUSIONS: By combining B-mode ultrasound and classical ML models, we demonstrate it is possible to achieve real-time tracking of human soleus muscle fascicles across a number of functionally relevant contractile conditions. This novel sensing modality paves the way for muscle physiology in-the-loop applications that could be used to modify gait via biofeedback or unlock novel wearable device control techniques that could enable restored or augmented locomotion performance.

The spin state of a molecular adsorbate driven by the ferroelectric substrate polarization.

The spin state of [Fe(H2B(pz)2)2(bipy)] thin films is mediated by changes in the electric field at the interface of organic ferroelectric polyvinylidene fluoride with trifluoroethylene (PVDF-TrFE). Signatures of the molecular crossover transition are evident in changes in the unoccupied states and the related shift from diamagnetic to paramagnetic characteristics. This may point the way to the molecular magneto-electric effect on devices.

At the moment of occurrence of a fragility hip fracture, men have higher mechanical properties values in comparison with women.

BACKGROUND: It is well established that males have lower fracture risk in comparison with females, which suggests a higher bone resistance in men. The aim of our study was to find out if in older patients with hip fragility fractures, gender has also an impact on trabecular bone material behaviour, specifically to determine whether trabecular mechanical properties under compressive loading differ between men and women who suffered a fragility hip fracture. METHODS: Femoral epiphyses were consecutively collected during hip replacement surgery due to proximal femur fragility fracture. Trabecular bone cylinders were drilled and submitted to uniaxial compression tests and mechanical properties were assessed. RESULTS: Seventy-three patients, 55 women (mean age 81 years and standard deviation of 7 years) and 18 men (mean age 81 years and standard deviation of 8 years) were evaluated. The ultimate stress of trabecular bone was significantly higher in men than in women: the median values and the interquartile range (IQR) were respectively 8.04(5.35-10.90) MPa vs. 4.46(3.02-7.73) MPa, (p-value = 0.005). The same difference between male and female was observed in the Young's modulus: 293.68(166.67-538.18) MPa vs. 174.26(73.07-322.28) MPa, (p-value = 0.028), and also in the energy to failure: 0.25(0.07-0.42) MJ/m³ vs. 0.11(0.05-0.25) MJ/m³, (p-value = 0.058). These differences were also verified after adjusting the analysis for age in a multivariate model analysis. CONCLUSIONS: Our observations demonstrated that, even in a population who suffered a fragility hip fracture, men still have higher trabecular bone mechanical properties in comparison with women.

Nanoscale fabrication of the ferroelectric polymer poly(vinylidene fluoride with trifluoroethylene) P(VDF-TrFE) 75:25 thin films by atomic force microscope nanolithography.

Thin films of an organic ferroelectric system, poly(vinylidene fluoride with trifluoroethylene) P(VDF-TrFE, Kureha Corporation, Tokyo, Japan) 75:25 layers, have been deposited on highly ordered pyrolytic graphite and silicon dioxide by the horizontal Schaefer method of Langmuir-Blodgett techniques. It is possible to "shave" or mechanically displace small regions of the polymer film by using atomic force microscope nanolithography techniques such as nanoshaving, leaving swaths of the surface cut to a depth of 4 nm and 12 nm exposing the substrate. The results of fabricating stripes by nanoshaving two holes close to each other show a limit to the material "stripe" widths of an average of 153.29 nm and 177.67 nm that can be produced. Due to the lack of adhesion between the substrates and the polymer P(VDF-TrFE) film, smaller "stripes" of P(VDF-TrFE) cannot be produced, and it can be shown by the sequencing of nanoshaved regions that "stripes" of thin films can be removed.

Altering the static dipole on surfaces through chemistry: molecular films of zwitterionic quinonoids.

The adsorption of molecular films made of small molecules with a large intrinsic electrical dipole has been explored. The data indicate that such dipolar molecules may be used for altering the interface dipole screening at the metal electrode interface in organic electronics. More specifically, we have investigated the surface electronic spectroscopic properties of zwitterionic molecules containing 12π electrons of the p-benzoquinonemonoimine type, C(6)H(2)(···NHR)(2)(···O)(2)(R = H (1), n-C(4)H(9) (2), C(3)H(6)-S-CH(3) (3), C(3)H(6)-O-CH(3) (4), CH(2)-C(6)H(5) (5)), adsorbed on Au. These molecules are stable zwitterions by virtue of the meta positions occupied by the nitrogen and oxygen substituents on the central ring, respectively. The structures of 2-4 have been determined by single crystal X-ray diffraction and indicate that in these molecules, two chemically connected but electronically not conjugated 6π electron subunits are present, which explains their strong dipolar character. We systematically observed that homogeneous molecular films with thickness as small as 1 nm were formed on Au, which fully cover the surface, even for a variety of R substituents. Preferential adsorption toward the patterned gold areas on SiO(2) substrates was found with 4. Optimum self-assembling of 2 and 5 results in ordered close packed films, which exhibit n-type character, based on the position of the Fermi level close to the conduction band minimum, suggesting high conductivity properties. This new type of self-assembled molecular films offers interesting possibilities for engineering metal-organic interfaces, of critical importance for organic electronics.

Approaching an organic semimetal: Electron pockets at the Fermi level for a p-benzoquinonemonoimine zwitterion.

There is compelling evidence of electron pockets, at the Fermi level, in the band structure for an organic zwitterion molecule of the p-benzoquinonemonoimine type. The electronic structure of the zwitterion molecular film has a definite, although small, density of states evident at the Fermi level as well as a nonzero inner potential and thus is very different from a true insulator. In spite of a small Brillouin zone, significant band width is observed in the intermolecular band dispersion. The results demonstrate that Bloch's theorem applies to the wave vector dependence of the electronic band structure formed from the molecular orbitals of adjacent molecules in a molecular thin film of a p-benzoquinonemonoimine type zwitterion.

The interface bonding and orientation of a quinonoid zwitterion.

We have investigated the interaction and orientation of a strongly dipolar zwitterionic p-benzoquinonemonoimine-type molecule, with a large intrinsic dipole of 10 Debye, on both conducting and on polar insulating substrates. Specifically, we deposited (6Z)-4-(butylamino)-6-(butyliminio)-3-oxocyclohexa-1,4-dien-1-olate C(6)H(2)([horiz bar, triple dot above]NHR)(2)([horiz bar, triple dot above]O)(2) where R = n-C(4)H(9), on both gold and ferroelectric lithium niobate surfaces. An influence of both transient and static electric dipoles on the zwitterionic adsorbate has been observed. For adsorption on gold, we find that the molecule bonds to the surface through the nitrogen atoms, forming films that remain fairly uniform down to thicknesses in the 1 nm range. Adsorption of this zwitterionic compound from solution on insulating, periodically poled ferroelectric lithium niobate substrates, showed preferential adsorption on one type of ferroelectric domain. For both gold and the lithium niobate substrates, the zwitterion adopts a preferential orientation with the plane of its "C(6) core" along the surface normal. This simplified geometry of strong dipole alignment provides a symmetry simplification allowing better identification of the vibrational modes responsible for Frank-Condon scattering revealed in the fine spectroscopic signature in the photoemission spectrum.

Atomic force microscope nanolithography: dip-pen, nanoshaving, nanografting, tapping mode, electrochemical and thermal nanolithography.

Atomic force microscopy (AFM) has been widely employed as a nanoscopic lithography technique. In this review, we summarize the current state of research in this field. We introduce the various forms of the technique, such as nanoshaving, nanografting and dip-pen nanolithography, which we classify according to the different interactions between the AFM probe and the substrate during the nanolithography fabrication process. Mechanical force, applied by the tip to the substrate, is the variable that can be controlled with good precision in AFM and it has been utilized in patterning self-assembled monolayers. In such applications, the AFM tip can break some relatively weak chemical bonds inside the monolayer. In general, the state of the art for AFM nanolithography demonstrates the power, resolution and versatility of the technique.

Activated water desorption from poly(methylvinylidene cyanide).

We have investigated water desorption from the polymer poly(methylvinylidene cyanide). The angle resolved thermal desorption spectra show large deviations from the cosn theta distribution for water desorption from poly(methylvinylidene cyanide) indicative of an activated desorption process. The Arrhenius plots obtained from Polanyi-Wigner analysis of the thermal desorption data suggest that a two-state model of desorption applies, while theory suggests that lattice strain in the polymer plays a key role in the thermal desorption of water.

Evidence for an influence of local dipole excitations in thermal desorption.

Ferroelectric crystalline copolymer films of vinylidene fluoride with trifluoroethylene (70%:30%) strongly interact with the dipoles of adsorbed and absorbed water molecules. This interaction can be probed with laser-assisted thermal desorption techniques. The UV light enhancement of water desorption is strongly light polarization dependent. The electronic structure of the ferroelectric copolymer films of vinylidene fluoride with trifluoroethylene films is locally altered with incident UV radiation suggesting metastable excited states that may involve dipole reorientation.

Crystalline ice grown on the surface of the ferroelectric polymer poly(vinylidene fluoride) (70%) and trifluoroethylene (30%).

Water ice is observed to order at the copolymer ferroelectric poly(vinylidene difluoride-trifluoroethylene) surface. The successful growth of crystalline thin films of water on these polymer surfaces implicates water to polymer dipole interactions. These ice thin films are sufficiently ordered for experimental identification of the wave vector dependence in the electronic band structure of hexagonal ice. The significant band dispersion, of about 1 eV, suggests strong overlap of molecular orbitals between adjacent water molecules in the ice film. The presence of dipole interactions with adsorbate water is consistent with the possibility of water acting as a spectator to surface ferroelectric transitions in this system.

Water adsorption on and desorption from crystalline copolymers of vinylidene fluoride with trifluoroethylene.

Water adsorption and absorption on crystalline polyvinylidene fluoride with 30% trifluoroethylene, P(VDF-TrFE, 70:30), was examined by thermal desorption spectroscopy. Two distinctly different water adsorption sites are identified: one adsorbed species that resembles ice and another species that interacts more strongly with the polymer thin film. The existence of the latter species is consistent with X-ray diffraction studies of water absorbed into the bulk of copolymers of polyvinylidene fluoride with trifluoroethylene crystalline thin films. There are strong steric effects observed in the angle-resolved thermal desorption that may be a result of the large polymer thin film surface dipoles.

Vibronic coupling in the valence band photoemission of the ferroelectric copolymer: poly(vinylidene fluoride) (70%) and trifluoroethylene (30%).

Two different vibrational contributions to the photoemission fine structure of the ferroelectric copolymer poly(vinlylidene fluoride) with trifluoroethylene (CH2-CF2:CHF-CF2, 70%:30%) are identified. The vibrational contributions at the higher photoemission binding energies are associated with two closely placed upsilon(a,s) (CH2) stretching modes while at the smaller photoemission binding energies, the fine structure is due to a delta (CH2) bending mode. The contribution of the delta (CH2) mode to the photoemission fine structure decreases with decreasing temperature. We associate this temperature dependence to the importance of symmetry in vibronic coupling to the photoemission process and increased dipole ordering with decreasing temperature in this organic ferroelectric system.

H/D isotopic exchange in water interactions with the ferroelectric copolymer: Poly(vinylidene fluoride-trifluoroethylene) (70%:30%).

For both water and heavy water adsorption and absorption on crystalline poly(vinylidene fluoride with trifluoroethylene (30%)), P(VDF-TrFE 70:30), two distinctly different adsorption sites have been identified by thermal desorption spectroscopy. One adsorbed water species resembles ice and there is also an absorbed water species that interacts more strongly with the polymer thin film, and in addition, there is a polymer surface (polymer to ice interface) water species. We find that there is H/D exchange between the water or heavy water molecules and the ferroelectric polymer (largely -(CH2-CF2)-), particularly at the polymer surface.