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Future Microbiol ; 15: 203-212, 2020 02.
Article in English | MEDLINE | ID: mdl-32056447

ABSTRACT

Aim: Carbapenemase-resistant Enterobacteriaceae represents a major concern in hospital setting. Materials & methods: The evolutionary history of carbapenem-resistant Klebsiella pneumonia strains was analyzed by core genome multilocus sequence typing and Bayesian phylogenesis by whole genomes sequencing. Results: A great increase carbapenem-resistant K.pneumoniae causing blood stream infection was observed in the years 2015-2016. At multilocus sequence typing (MLST), they were prevalently ST512 and ST101. ST512 were core genome (cg)MLST 53, while ST101 mainly cgMLST453. The minimum-spanning tree, based on cgMLST, showed strains clustering based on the different STs. By Bayesian phylogenetic analysis, maximum clade credibility tree showed that strains were introduced in the year 2005 with the most probable location in the ICU ward. Two outbreaks by ST101 and ST512 strains with Tower T8 as the probable location were evidenced. Conclusion: Molecular epidemiology is a powerful tool to track the way of transmission of resistant bacteria within the hospital setting.


Subject(s)
Bacterial Proteins/genetics , Carbapenems/pharmacology , Genome, Bacterial , Klebsiella Infections/microbiology , Klebsiella pneumoniae/genetics , beta-Lactam Resistance/genetics , beta-Lactamases/genetics , Adult , Aged , Aged, 80 and over , Anti-Bacterial Agents/pharmacology , Bacteremia/epidemiology , Bacteremia/microbiology , Carbapenem-Resistant Enterobacteriaceae/genetics , Disease Outbreaks , Evolution, Molecular , Female , Humans , Klebsiella Infections/epidemiology , Klebsiella pneumoniae/drug effects , Male , Middle Aged , Molecular Epidemiology , Multilocus Sequence Typing , Phylogeny , Whole Genome Sequencing , Young Adult
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