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1.
J Phys Chem B ; 111(7): 1640-7, 2007 Feb 22.
Article in English | MEDLINE | ID: mdl-17256978

ABSTRACT

Due to dopamine's chemical structure and the fact that it has three pKa values, its deprotonation process, in aqueous solution, may involve different chemical species. For instance, the first deprotonation step, from the fully protonated dopamine molecule (H3DA+) to the neutral one (H2DA), will result in zwitterionic species if a proton from one of the OH groups in the catechol ring is lost or into a neutral species if the proton is lost from the amino group. Given that the interaction of such a product with its environment will be quite different depending on its nature, it is very important, therefore, to have an accurate knowledge of which is the dopamine chemical species that results after each deprotonation step. In order to gain a better understanding of dopamine chemistry and to establish a plausible dopamine deprotonation pathway, the optimized geometries of the aforementioned species were calculated in this work by means of the density functionals theory (B3LYP/6-311+G(d,p)) in both cases: in vacuo and with solvent effect, to assess, among other theoretical criteria, the proton affinities of the different dopamine species. This permitted us to propose the following reaction pathway: [reaction in text]. Moreover, the calculations of the chemical shift (NMR-GIAO) modeling the effect of the solvent with a continuum method (PCM) was in agreement with the 13C NMR experimental spectra, which confirmed even further the proposed deprotonation pathway.


Subject(s)
Dopamine/chemistry , Magnetic Resonance Spectroscopy , Protons , Water/chemistry , Catechols/chemistry , Cations , Models, Molecular , Models, Theoretical
2.
J Org Chem ; 69(26): 9063-72, 2004 Dec 24.
Article in English | MEDLINE | ID: mdl-15609939

ABSTRACT

The varied and essential involvement of metal ions and inorganic salts in biological and chemical processes motivated the present study where 5-carboxy- and 5-hydroxy-1,3-dioxanes are used as model frameworks for the evaluation of the conformational behavior of oxygen-containing receptors in the presence of Li(+), Na(+), K(+), Ag(+), Mg(2+), Ca(2+), Ba(2+), and Zn(2+). Thus, the position of equilibria, established by means of BF(3), between diastereomeric cis- and trans-5-substituted-2-phenyl-1,3-dioxanes, in solvent THF and in the presence of 0, 1, and 5 equiv of salt, has been determined. The observed Delta G(o) degrees values for the conformational equilibria of 5-carboxy-1,3-dioxane show that Ag(+), Li(+), and Ca(2+) complexation leads to increased stability of the axial isomer. In the case of the 5-hydroxy-1,3-dioxane, Mg(2+), Ag(+), and Zn(2+) are the metal ions that stabilize the axial conformer of the heterocycle upon association. Interpretation of the experimental observations was based on DFT molecular modeling studies at the Becke3LYP/6-31G* and Becke3LYP/6-31+G** levels of theory. Although gas-phase calculations give Delta E values that are too large when modeling equilibria involving ionic species in polar solution, the computational results confirm the structural and energetic consequences of metal cation coordination to the oxygen atom in carbonyls or ethers. The results derived from the present study contribute to our understanding of the chemical processes involved in molecular recognition and physiological events.

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