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1.
Mol Biol (Mosk) ; 47(5): 861-7, 2013.
Article in Russian | MEDLINE | ID: mdl-25509359

ABSTRACT

The molecular modeling method is promising for the assessment of protein structure, being able to present an energetically beneficial protein conformation with atomic precision. This method is of great importance for studying molecular interactions and confirming pathogenic significance of the changes in the protein structure caused by particular mutations. In the present study we used molecular modeling for the assessment of mutations in the SOD1 gene in patients with amyotrophic lateral sclerosis (ALS), a severe neurodegenerative disorder characterized by the loss of the spinal and cerebral motor neurons. The product of SOD1 is a cytosolic dimeric enzyme Cu/Zn superoxide dismutase (SOD1) responsible for detoxification of the cellular superoxide radicals. We showed that all 8 revealed coding point mutations of the gene led to moderate or significant changes of the SOD1 protein energy. Mutation His49Arg increased the protein energy, and reconstruction of the respective model pointed out to spatial destabilization of the molecule and abnormal interaction with the metal ion inside the active center. The other 7 mutations (Gly17Ala, Leu85Mal, Asn87Ser, Asp91Ala, Serl06Leu, Glu134Gly, and Leul45Phe), on the contrary, led to decrease of the protein energy and increase of the spatial stability of SOD1, which is usually accompanied by increased propensity of the 'inert' mutant molecule to misfolding and cellular aggregation. Thereby, the results of in silico analysis of the SOD1 gene mutations confirm staying of ALS within the class of the so-called conformational diseases of the central nervous system, a characteristic feature of which is forming of cytotoxic insoluble protein inclusions in neurons.


Subject(s)
Amyotrophic Lateral Sclerosis/metabolism , Models, Molecular , Protein Conformation , Superoxide Dismutase/chemistry , Amino Acid Sequence , Amyotrophic Lateral Sclerosis/genetics , Amyotrophic Lateral Sclerosis/pathology , Computer Simulation , Humans , Molecular Sequence Data , Mutation/genetics , Neurons/chemistry , Neurons/enzymology , Structure-Activity Relationship , Superoxide Dismutase/genetics , Superoxide Dismutase-1
2.
Brain Res ; 957(1): 61-75, 2002 Dec 06.
Article in English | MEDLINE | ID: mdl-12443981

ABSTRACT

Long-term potentiation (LTP) is the most prominent model to study neuronal plasticity. Previous studies using quantal analysis of an early stage of LTP in the CA1 hippocampal region (<1 h after induction) suggested increases in both the mean number of transmitter quanta released by each presynaptic pulse (m, quantal content) and postsynaptic effect of a single quantum (v, quantal size). When LTP was large, it was m that increased predominantly suggesting prevailing presynaptic contribution. However, LTP consists of several temporary phases with presumably different mechanisms. Here we recorded excitatory postsynaptic potentials from CA1 hippocampal slices before and up to 3.5 h after LTP induction. A new version of the noise deconvolution revealed significant increases in m with smaller and often not statistically significant changes in v. The changes in m were similar for both early (<1 h) and later (1-3 h) post-tetanic periods and correlated with LTP magnitude. The coefficient of variation of the response amplitude and the number of failures decreased during both early and late post-tetanic periods. The results suggest that both early (<0.5 h) and later LTP components (0.5-3 h) are maintained by presynaptic changes, which include increases in release probabilities and the number of effective release sites. In addition initially silent synapses can be converted into effective ones due to either pre- or postsynaptic rearrangements. If this occurs, our data indicate that the number and the efficacy of the receptors in the new transmission sites are approximately similar to those in the previously effective sites.


Subject(s)
Hippocampus/physiology , Long-Term Potentiation , Presynaptic Terminals/physiology , Synaptic Transmission , Animals , Electrophysiology , Excitatory Postsynaptic Potentials , Male , Probability , Rats , Rats, Wistar , Tetany , Time Factors
3.
Neuropharmacology ; 39(12): 2288-301, 2000 Sep.
Article in English | MEDLINE | ID: mdl-10974312

ABSTRACT

In chemical synapses information flow is polarized. However, the postsynaptic cells can affect transmitter release via retrograde chemical signaling. Here we explored the hypothesis that, in large synapses, having large synaptic cleft resistance, transmitter release can be enhanced by electrical (ephaptic) signaling due to depolarization of the presynaptic release site induced by the excitatory postsynaptic current itself. The hypothesis predicts that, in such synapses, postsynaptic hyperpolarization would increase response amplitudes "supralinearly", i.e. stronger than predicted from the driving force shift. We found supralinear increases in the amplitude of minimal excitatory postsynaptic potential (EPSP) during hyperpolarization of CA3 pyramidal neurons. Failure rate, paired-pulse facilitation, coefficient of variation of the EPSP amplitude and EPSP quantal content were also modified. The effects were especially strong on mossy fiber EPSPs (MF-EPSPs) mediated by the activation of large synapses and identified pharmacologically or by their kinetics. The effects were weaker on commissural fiber EPSPs mediated by smaller and more remote synapses. Even spontaneous membrane potential fluctuations were associated with supralinear MF-EPSP increases and failure rate reduction. The results suggest the existence of a novel mechanism for retrograde control of synaptic efficacy from postsynaptic membrane potential and are consistent with the ephaptic feedback hypothesis.


Subject(s)
Excitatory Amino Acid Agonists/pharmacology , Excitatory Postsynaptic Potentials/drug effects , Mossy Fibers, Hippocampal/drug effects , Pyramidal Cells/drug effects , Synapses/drug effects , Synaptic Transmission/drug effects , alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid/pharmacology , Animals , Electrophysiology , In Vitro Techniques , Membrane Potentials/drug effects , Neurotransmitter Agents/metabolism , Patch-Clamp Techniques , Rats , Rats, Wistar
4.
Neurosci Behav Physiol ; 29(3): 347-54, 1999.
Article in English | MEDLINE | ID: mdl-10493549

ABSTRACT

The mechanisms of the early (up to 1 h) and late (up to 3 h) phases of long-term potentiation were studied by analyzing the interaction between long-term potentiation and presynaptic paired-pulse facilitation. "Minimal" excitatory postsynaptic potentials were measured in pyramidal neurons in field CA1 of rat hippocampal slices in conditions of paired-pulse stimulation of the radial layer. In most neurons, paired-pulse facilitation decreased after induction of long-term potentiation, and this reduction lasted throughout the recording period (up to 3.5 h). Changes in paired-pulse facilitation correlated with the extent of long-term facilitation and with the initial level of paired-pulse facilitation, and the extent of facilitation depended on the initial level of paired-pulse facilitation. This latter relationship was different for the early and late phases of long-term potentiation and increased with time. Overall, the data obtained here demonstrate a significant role for presynaptic mechanisms in maintaining both the early and late phases of long-term potentiation. It is suggested that the basic mechanism of the early phase of potentiation is an increase in the probability that transmitter will be released, which also leads to an increase in the number of effective release sites, due to transformation of "presynaptically quiet" synapses into effective synapses. It is proposed that the development of the late phase is based on simultaneous pre- and postsynaptic structural transformations which increase the number of synaptically active zones.


Subject(s)
Hippocampus/physiology , Long-Term Potentiation/physiology , Animals , Electric Stimulation , Excitatory Postsynaptic Potentials/physiology , Hippocampus/cytology , In Vitro Techniques , Pyramidal Cells/physiology , Rats , Rats, Wistar , Receptors, Presynaptic/physiology , Regression Analysis
5.
Neuroscience ; 93(2): 469-77, 1999.
Article in English | MEDLINE | ID: mdl-10465429

ABSTRACT

Minimal excitatory postsynaptic potentials were evoked in CA3 pyramidal neurons by activation of the mossy fibres in hippocampal slices from seven- to 16-day-old rats. Conditioning intracellular depolarizing pulses were delivered as 50- or 100-Hz bursts. A statistically significant depression and potentiation was induced in four and five of 13 cases, respectively. The initial state of the synapses influenced the effect: the amplitude changes correlated with the pretetanic paired-pulse facilitation ratio. Afferent (mossy fibre) tetanization produced a significant depression in four of six inputs, and no significant changes in two inputs. Quantal content decreased or increased following induction of the depression or potentiation, respectively, whereas no significant changes in quantal size were observed. Compatible with presynaptic maintenance mechanisms of both depression and potentiation, changes in the mean quantal content were associated with modifications in the paired-pulse facilitation ratios, coefficient of variation of response amplitudes and number of response failures. Cases were encountered when apparently "presynaptically silent" synapses were converted into functional synapses during potentiation or when effective synapses became "presynaptically silent" when depression was induced, suggesting respective changes in the probability of transmitter release. It is concluded that, in juvenile rats, it is possible to induce lasting potentiation at the mossy fibre-CA3 synapses by purely postsynaptic stimulation, while afferent tetanization is accompanied by long-lasting depression. The data support the existence not only of a presynaptically induced, but also a postsynaptically induced form of long-term potentiation in the mossy fibre-CA3 synapse. Despite a postsynaptic induction mechanism, maintenance of both potentiation and depression is likely to occur presynaptically.


Subject(s)
Hippocampus/physiology , Long-Term Potentiation/physiology , Pyramidal Cells/physiology , Synapses/physiology , Animals , Electric Stimulation , Excitatory Postsynaptic Potentials/drug effects , Excitatory Postsynaptic Potentials/physiology , Hippocampus/cytology , Hippocampus/growth & development , In Vitro Techniques , Mossy Fibers, Hippocampal/drug effects , Mossy Fibers, Hippocampal/physiology , Rats , Rats, Wistar
6.
Ross Fiziol Zh Im I M Sechenova ; 84(5-6): 426-35, 1998.
Article in Russian | MEDLINE | ID: mdl-9785407

ABSTRACT

Presynaptic paired-pulse facilitation (PPF) rate decreased in most CA1 pyramidal neurones following the long-term potantiation (LTP) induction. The decrease correlated with the LTP magnitude as well as with the initial (pretetanic) PPF rate. The data obtained suggests an involvement of presynaptic mechanisms in maintaining the early and the delayed LTPs.


Subject(s)
Hippocampus/physiology , Long-Term Potentiation/physiology , Neurons/physiology , Animals , Electric Stimulation , Hippocampus/ultrastructure , Neurons/ultrastructure , Rats , Rats, Wistar , Synapses/physiology , Synaptic Transmission/physiology
7.
Neuroscience ; 85(1): 1-13, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9607698

ABSTRACT

Long-term potentiation is an experimental paradigm used to study synaptic plasticity and memory mechanisms. One similarity between long-term potentiation and memory is the existence of several distinct phases. However, our preliminary quantal analysis did not reveal essential differences in expression mechanisms of the early (< 1 h) and later (up to 3 h) phases of long-term potentiation. The data were compatible with presynaptic mechanisms of both phases. Another approach to distinguish between presynaptic and postsynaptic mechanisms is analysis of interaction between long-term potentiation and presynaptic paired-pulse facilitation. Such analysis had been previously done mainly with recordings of field potentials reflecting the activity of large neuronal populations. Only the early potentiation phase had been previously analysed with recordings from single neurons. The results from different groups were contradictory. In the present study, minimal excitatory postsynaptic potentials were recorded from CA1 pyramidal neurons of rat hippocampal slices. Paired-pulse facilitation ratios were calculated for various periods (up to 2-3 h) following induction of long-term potentiation. The ratio persistently decreased in the majority of neurons following long-term potentiation induction. The decrease in the paired-pulse facilitation ratio correlated with the magnitude of long-term potentiation and with the initial (pretetanic) facilitation ratio. Therefore, the general results of the present analysis was similar with the results of the quantal analysis: it is consistent with a strong involvement of presynaptic mechanisms in maintenance of both early and late phases of long-term potentiation. However, individual neurons could show variable changes in the paired-pulse facilitation, e.g., increases at late (> 0.5-1 h) periods after tetanus. Calculations of partial correlations and regression analysis indicated that positive correlation between potentiation magnitude and initial (pretetanic) paired-pulse facilitation tended to increase in the late potentiation phase (1.5-2.5 h post-tetanus) indicating that different mechanisms are involved in the early (0.5 h post-tetanus) and the late phase of long-term potentiation. The findings are compatible with involvement of presynaptic mechanisms in both the early and late phases of long-term potentiation. However, the results suggest that contribution of changes in release probability and in effective number of transmitter release sites may differ during the two phases. It is suggested that activation of silent synapses and increases in the number of transmission zones due to pre- and postsynaptic structural rearrangements represent important mechanisms of the late phase of long-term potentiation.


Subject(s)
Excitatory Postsynaptic Potentials/physiology , Hippocampus/physiology , Long-Term Potentiation/physiology , Animals , Electric Stimulation/methods , In Vitro Techniques , Male , Patch-Clamp Techniques , Rats , Rats, Wistar
8.
Biosystems ; 40(1-2): 159-67, 1997.
Article in English | MEDLINE | ID: mdl-8971208

ABSTRACT

The basis for this neuronal model is that the properties of excitable membranes are controlled by biochemical reactions occurring in the nerve cells. The kinetics of these supposed chemical reactions is described by a set of first order differential equations. We considered the effect of regulation of the properties of sodium channels. This allows the simulation of the changes in the neuron's electrical activity parameters occurring during learning, associated with its excitability. The neuronal model exhibits different excitability after the learning procedure relative to the different input signals that corresponds to the experimental data.


Subject(s)
Neurons/physiology , Learning/physiology , Memory/physiology , Models, Biological , Neurons/cytology
9.
Biofizika ; 38(3): 471-7, 1993.
Article in Russian | MEDLINE | ID: mdl-8512955

ABSTRACT

A model of the neuron is proposed which is capable of learning with a teacher. The model is based on hypothetic chemical processes which can proceed in a real nerve cell. It is shown that such model having O(N2) elements of the memory is capable of dividing in two classes O(N2) of different input images, where N is the dimensionality of the input vector.


Subject(s)
Models, Neurological , Neuronal Plasticity
10.
Biofizika ; 37(6): 1071-5, 1992.
Article in Russian | MEDLINE | ID: mdl-1298348

ABSTRACT

Different methods of definition of the threshold of the action potential (AP) generation were considered. It was established that the threshold defined as a difference between the critical value of the membrane depolarization and the resting potential was practically independent of the value and duration of an input signal which was given as a stepped function. It was shown that the critical values of the membrane depolarization could be defined by the point of bend, as well as by the point of maximum of the curve curvature on the frontal part of AP.


Subject(s)
Action Potentials , Nervous System Physiological Phenomena , Models, Biological
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