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1.
J Phys Chem A ; 127(44): 9178-9184, 2023 Nov 09.
Article in English | MEDLINE | ID: mdl-37878768

ABSTRACT

An important concern related to the performance of Li-ion batteries is the formation of a solid electrolyte interphase on the surface of the anode. This film is formed from the decomposition of electrolytes and can have important effects on the stability and performance. Here, we evaluate the decomposition pathway of ethylene carbonate and related organic electrolyte molecules using a series of density functional approximations and correlated wave function (WF) methods, including the coupled-cluster theory with single, double, and perturbative triple excitations [CCSD(T)] and auxiliary-field quantum Monte Carlo (AFQMC). We find that the transition state barrier associated with ring opening varies widely across different functionals, ranging from 3.01 to 17.15 kcal/mol, which can be compared to the value of 12.84 kcal/mol predicted by CCSD(T). This large variation underscores the importance of benchmarking against accurate WF methods. A performance comparison of all of the density functionals used in this study reveals that the M06-2X-D3 (a meta-hybrid GGA), CAM-B3LYP-D3 (a range-separated hybrid), and B2GP-PLYP-D3 (a double hybrid) perform the best, with average errors of about 1.50-1.60 kcal/mol compared to CCSD(T). We also compared the performance of the WF methods that are more scalable than CCSD(T), finding that DLPNO-CCSD(T) and phaseless AFQMC with a DFT trial wave function exhibit average errors of 1.38 and 1.74 kcal/mol, respectively.

2.
J Chem Theory Comput ; 18(5): 2845-2862, 2022 May 10.
Article in English | MEDLINE | ID: mdl-35377642

ABSTRACT

The accurate ab initio prediction of ionization energies is essential to understanding the electrochemistry of transition metal complexes in both materials science and biological applications. However, such predictions have been complicated by the scarcity of gas phase experimental data, the relatively large size of the relevant molecules, and the presence of strong electron correlation effects. In this work, we apply all-electron phaseless auxiliary-field quantum Monte Carlo (ph-AFQMC) utilizing multideterminant trial wave functions to six metallocene complexes to compare the computed adiabatic and vertical ionization energies with experimental results. We find that ph-AFQMC yields mean absolute errors (MAEs) of 1.69 ± 1.02 kcal/mol for the adiabatic energies and 2.85 ± 1.13 kcal/mol for the vertical energies. We also carry out density functional theory (DFT) calculations using a variety of functionals, which yields MAEs of 3.62-6.98 kcal/mol and 3.31-9.88 kcal/mol, as well as one variant of localized coupled cluster calculations (DLPNO-CCSD(T0) with moderate PNO cutoffs), which has MAEs of 4.96 and 6.08 kcal/mol, respectively. We also test the reliability of DLPNO-CCSD(T0) and DFT on acetylacetonate (acac) complexes for adiabatic energies measured in the same manner experimentally, and we find higher MAEs, ranging from 4.56 to 10.99 kcal/mol (with a different ordering) for DFT and 6.97 kcal/mol for DLPNO-CCSD(T0). Finally, by utilizing experimental solvation energies, we show that accurate reduction potentials in solution for the metallocene series can be obtained from the AFQMC gas phase results.

3.
J Am Chem Soc ; 142(24): 10806-10813, 2020 06 17.
Article in English | MEDLINE | ID: mdl-32431151

ABSTRACT

Accurately characterizing isoprene ozonolysis continues to challenge atmospheric chemists. The reaction is believed to be a spontaneous, concerted cycloaddition. However, little information is available about the entrance channel and isoprene-ozone complexes thought to define the long-range portion of the reaction coordinate. Our coupled cluster and auxiliary field quantum Monte Carlo calculations predict multiple stable isoprene-ozone van der Waals complexes for trans-isoprene in the gas phase with moderate association energies. These results indicate that long-range dynamics in the isoprene-ozone entrance channel can impact the overall reaction in the troposphere and provide the spectroscopic information necessary to extend the microwave characterization of isoprene ozonolysis to prereactive complexes. At the air-water interface, Born-Oppenheimer molecular dynamics simulations indicate that the cycloaddition reaction between ozone and trans-isoprene follows a stepwise mechanism, which is quite distinct from our proposed gas-phase mechanism and occurs on a femtosecond time scale. The stepwise nature of isoprene ozonolysis on the aqueous surface is more consistent with the DeMore mechanism than with the Criegee mechanism suggested by the gas-phase calculations, suggesting that the reaction media may play an important role in the reaction. Overall, these predictions aim to provide a missing fundamental piece of molecular insight into isoprene ozonolysis, which has broad tropospheric implications due to its critical role as a nighttime source of hydroxyl radicals.


Subject(s)
Butadienes/chemistry , Hemiterpenes/chemistry , Molecular Dynamics Simulation , Ozone/chemistry , Density Functional Theory , Monte Carlo Method
4.
J Chem Theory Comput ; 16(5): 3041-3054, 2020 May 12.
Article in English | MEDLINE | ID: mdl-32293882

ABSTRACT

Transition-metal complexes are ubiquitous in biology and chemical catalysis, yet they remain difficult to accurately describe with ab initio methods because of the presence of a large degree of dynamic electron correlation, and, in some cases, strong static correlation which results from a manifold of low-lying states. Progress has been hindered by a scarcity of high-quality gas-phase experimental data, while exact ab initio predictions are usually computationally unaffordable because of the large size of the relevant complexes. In this work, we present a data set of 34 tetrahedral, square planar, and octahedral 3d metal-containing complexes with gas-phase ligand-dissociation energies that have reported uncertainties of ≤2 kcal/mol. We perform all-electron phaseless auxiliary-field quantum Monte Carlo (ph-AFQMC) calculations utilizing multideterminant trial wave functions selected by a black box procedure. We compare the results with those from the density functional theory (DFT) with the B3LYP, B97, M06, PBE0, ωB97X-V, and DSD-PBEP86/2013 functionals and a localized orbital variant of the coupled cluster theory with single, double, and perturbative triple excitations (DLPNO-CCSD(T)). We find mean averaged errors of 1.07 ± 0.27 kcal/mol for our most sophisticated ph-AFQMC approach versus 2.81 kcal/mol for DLPNO-CCSD(T) and 1.49-3.78 kcal/mol for DFT. We find maximum errors of 2.96 ± 1.71 kcal/mol for our best ph-AFQMC method versus 9.15 kcal/mol for DLPNO-CCSD(T) and 5.98-13.69 kcal/mol for DFT. The reasonable performance of a number of DFT functionals is in stark contrast to the much poorer accuracy previously demonstrated for diatomic species, suggesting a moderation in electron correlation because of ligand coordination in most cases. However, the unpredictably large errors for a small subset of cases with both DFT and DLPNO-CCSD(T) methods leave cause for concern, especially in light of the unreliability of common multireference indicators. In contrast, the robust and, in principle, systematically improvable results of ph-AFQMC for these realistic complexes establish the method as a useful tool for elucidating the electronic structure of transition-metal-containing complexes and predicting their gas-phase properties.

5.
J Chem Theory Comput ; 16(4): 2109-2123, 2020 Apr 14.
Article in English | MEDLINE | ID: mdl-32150400

ABSTRACT

Density functional theory (DFT) is known to often fail when calculating thermodynamic values, such as ionization potentials (IPs), due to nondynamical error (i.e., the self-interaction term). Localized orbital corrections (LOCs), derived from assigning corresponding corrections for the atomic orbitals, bonds, and paired and unpaired electrons, are utilized to correct the IPs calculated from DFT. Some of the assigned parameters, which are physically due to the contraction of and change of the environment around a bond, depend on identifying the location in the molecule from which the electron is removed using differences in the charge density between neutral and oxidized species. In our training set, various small organic and inorganic molecules from the literature with the reported experimental IP were collected using the NIST database. For certain molecules with uncertain or no experimental measurements, we obtain the IP using coupled cluster theory and auxiliary field quantum Monte Carlo. After applying these corrections, as generated by least-squares regression, LOC reduces the mean absolute deviation (MAD) of the training set from 0.143 to 0.046 eV (R2 = 0.895), and LOC reduces the MAD of the test set from 0.192 to 0.097 eV (R2 = 0.833).

6.
Acc Chem Res ; 52(5): 1289-1300, 2019 05 21.
Article in English | MEDLINE | ID: mdl-31056907

ABSTRACT

Rhenium and manganese bipyridyl tricarbonyl complexes have attracted intense interest for their promising applications in photocatalytic and electrocatalytic CO2 reduction in both homogeneous and heterogenized systems. To date, there have been extensive studies on immobilizing Re catalysts on solid surfaces for higher catalytic efficiency, reduced catalyst loading, and convenient product separation. However, in order for the heterogenized molecular catalysts to achieve the combination of the best aspects of homogeneous and heterogeneous catalysts, it is essential to understand the fundamental physicochemical properties of such heterogeneous systems, such as surface-bound structures of Re/Mn catalysts, substrate-adsorbate interactions, and photoinduced or electric-field-induced effects on Re/Mn catalysts. For example, the surface may act to (un)block substrates, (un)trap charges, (de)stabilize particular intermediates (and thus affect scaling relations), and shift potentials in different directions, just as protein environments do. The close collaboration between the Lian, Batista, and Kubiak groups has resulted in an integrated approach to investigate how the semiconductor or metal surface affects the properties of the attached catalyst. Synthetic strategies to achieve stable and controlled attachment of Re/Mn molecular catalysts have been developed. Steady-state, time-resolved, and electrochemical vibrational sum-frequency generation (SFG) spectroscopic studies have provided insight into the effects of interfacial structures, ultrafast vibrational energy relaxation, and electric field on the Re/Mn catalysts, respectively. Various computational methods utilizing density functional theory (DFT) have been developed and applied to determine the molecular orientation by direct comparison to spectroscopy, unravel vibrational energy relaxation mechanisms, and quantify the interfacial electric field strength of the Re/Mn catalyst systems. This Account starts with a discussion of the recent progress in determining the surface-bound structures of Re catalysts on semiconductor and Au surfaces by a combined vibrational SFG and DFT study. The effects of crystal facet, length of anchoring ligands, and doping of the semiconductor on the bound structures of Re catalysts and of the substrate itself are discussed. This is followed by a summary of the progress in understanding the vibrational relaxation (VR) dynamics of Re catalysts covalently adsorbed on semiconductor and metal surfaces. The VR processes of Re catalysts on TiO2 films and TiO2 single crystals and a Re catalyst tethered on Au, particularly the role of electron-hole pair (EHP)-induced coupling on the VR of the Re catalyst bound on Au, are discussed. The Account also summarizes recent studies in quantifying the electric field strength experienced by the catalytically active site of the Re/Mn catalyst bound on a Au electrode based on a combined electrochemical SFG and DFT study of the Stark tuning of the CO stretching modes of these catalysts. Finally, future research directions on surface-immobilized molecular catalyst systems are discussed.

7.
Chem Soc Rev ; 48(7): 1865-1873, 2019 Apr 01.
Article in English | MEDLINE | ID: mdl-30869084

ABSTRACT

As the challenges in science increase in scope and interdisciplinarity, collaboration becomes increasingly important. Our groups have maintained close collaborations for solar fuels research over the past decade. Based on this experience, we discuss strategies for collaboration between experiment and theory including facilitation of effective communication and navigation of problems that arise. These strategies are illustrated by case studies of collaborative efforts in solar fuels research pertaining to interfacial electron transfer in dye-sensitized metal oxides and the design and mechanism of water-oxidation catalysts.

8.
J Chem Theory Comput ; 15(4): 2346-2358, 2019 Apr 09.
Article in English | MEDLINE | ID: mdl-30883110

ABSTRACT

The bond dissociation energies of a set of 44 3 d transition metal-containing diatomics are computed with phaseless auxiliary-field quantum Monte Carlo (ph-AFQMC) utilizing a correlated sampling technique. We investigate molecules with H, N, O, F, Cl, and S ligands, including those in the 3dMLBE20 database first compiled by Truhlar and co-workers with calculated and experimental values that have since been revised by various groups. In order to make a direct comparison of the accuracy of our ph-AFQMC calculations with previously published results from 10 DFT functionals, CCSD(T), and icMR-CCSD(T), we establish an objective selection protocol which utilizes the most recent experimental results except for a few cases with well-specified discrepancies. With the remaining set of 41 molecules, we find that ph-AFQMC gives robust agreement with experiment superior to that of all other methods, with a mean absolute error (MAE) of 1.4(4) kcal/mol and maximum error of 3(3) kcal/mol (parentheses account for reported experimental uncertainties and the statistical errors of our ph-AFQMC calculations). In comparison, CCSD(T) and B97, the best performing DFT functional considered here, have MAEs of 2.8 and 3.7 kcal/mol, respectively, and maximum errors in excess of 17 kcal/mol (for the CoS diatomic). While a larger and more diverse data set would be required to demonstrate that ph-AFQMC is truly a benchmark method for transition metal systems, our results indicate that the method has tremendous potential, exhibiting unprecedented consistency and accuracy compared to other approximate quantum chemical approaches.

9.
J Am Chem Soc ; 140(50): 17643-17655, 2018 12 19.
Article in English | MEDLINE | ID: mdl-30468391

ABSTRACT

Attaching molecular catalysts to metal and semiconductor electrodes is a promising approach to developing new catalytic electrodes with combined advantages of molecular and heterogeneous catalysts. However, the effect of the interfacial electric field on the stability, activity, and selectivity of the catalysts is often poorly understood due to the complexity of interfaces. In this work, we examine the strength of the interfacial field at the binding site of CO2 reduction catalysts including Re(S-2,2'-bipyridine)(CO)3Cl and Mn(S-2,2'-bipyridine)(CO)3Br immobilized on Au electrodes. The vibrational spectra are probed by sum frequency generation spectroscopy (SFG), showing pronounced potential-dependent frequency shifts of the carbonyl stretching modes. Calculations of SFG spectra and Stark tuning rates based on density functional theory allow for direct interpretation of the configurations of the catalysts bound to the surfaces and the influence of the interfacial electric field. We find that electrocatalysts supported on Au electrodes have tilt angles of about 65-75° relative to the surface normal with one of the carbonyl ligands in direct contact with the surface. Large interfacial electric fields of 108-109 V/m are determined through the analysis of experimental frequency shifts and theoretical Stark tuning rates of the symmetric CO stretching mode. These large electric fields thus significantly influence the CO2 binding site.

10.
Inorg Chem ; 57(24): 15474-15480, 2018 Dec 17.
Article in English | MEDLINE | ID: mdl-30481007

ABSTRACT

A computational inverse design method suitable to assist the development and optimization of molecular catalysts is introduced. Catalysts are obtained by continuous optimization of "alchemical" candidates in the vicinity of a reference catalyst with well-defined reaction intermediates and rate-limiting step. A NiII-iminoalkoxylate catalyst for aqueous CO/CO2 conversion is found with improved performance relative to a NiII-iminothiolate reference complex, previously reported as a biomimetic synthetic model of CO dehydroxygenase. Similar energies of other intermediates and transition states along the reaction mechanism show improved scaling relations relative to the reference catalyst. The linear combination of atomic potential tight-binding model Hamiltonian and the limited search of synthetically viable changes in the reference structure enable efficient minimization of the energy barrier for the rate-limiting step (i.e., formation of [LNiII(COOH)]-), bypassing the exponential scaling problem of high-throughput screening techniques. The reported findings demonstrate an inverse design method that could also be implemented with multiple descriptors, including reaction barriers and thermodynamic parameters for reversible reactivity.

11.
J Phys Chem Lett ; 9(2): 406-412, 2018 Jan 18.
Article in English | MEDLINE | ID: mdl-29227669

ABSTRACT

A combination of time-resolved vibrational spectroscopy and density functional theory techniques have been applied to study the vibrational energy relaxation dynamics of the Re(4,4'-dicyano-2,2'-bipyridine)(CO)3Cl (Re(CO)3Cl) catalyst for CO2 to CO conversion bound to gold surfaces. The kinetics of vibrational relaxation exhibits a biexponential decay including an ultrafast initial relaxation and complete recovery of the ground vibrational state. Ab initio molecular dynamics simulations and time-dependent perturbation theory reveal the former to be due to vibrational population exchange between CO stretching modes and the latter to be a combination of intramolecular vibrational relaxation (IVR) and electron-hole pair (EHP)-induced energy transfer into the gold substrate. EHP-induced energy transfer from the Re(CO)3Cl adsorbate into the gold surface occurs on the same time scale as IVR of Re(CO)3Cl in aprotic solvents. Therefore, it is expected to be particularly relevant to understanding the reduced catalytic activity of the homogeneous catalyst when anchored to a metal surface.

14.
J Am Chem Soc ; 139(46): 16466-16469, 2017 11 22.
Article in English | MEDLINE | ID: mdl-29083146

ABSTRACT

Spin-dependent intramolecular electron transfer is revealed in the ReI(CO)3(py)(bpy-Ph)-perylenediimide radical anion (ReI-bpy-PDI-•) dyad, a prototype model system for artificial photosynthesis. Quantum chemical calculations and ultrafast transient absorption spectroscopy experiments demonstrate that selective photoexcitation of ReI-bpy results in electron transfer from PDI-• to ReI-bpy, forming two distinct charge-shifted states. One is an overall doublet whose return to the ground state is spin-allowed. The other, high-spin quartet state, persists for 67 ns due to spin-forbidden back-electron transfer, constituting a more than thousandfold lifetime improvement compared to the low-spin state. Exploiting this spin dependency holds promise for artificial photosynthetic systems requiring long-lived reduced states to perform multi-electron chemistry.

15.
Chem Sci ; 8(5): 3821-3831, 2017 May 01.
Article in English | MEDLINE | ID: mdl-28580115

ABSTRACT

A major goal of artificial photosynthesis research is photosensitizing highly reducing metal centers using as much as possible of the solar spectrum reaching Earth's surface. The radical anions and dianions of rylenediimide (RDI) dyes, which absorb at wavelengths as long as 950 nm, are powerful photoreductants with excited state oxidation potentials that rival or exceed those of organometallic chromophores. These dyes have been previously incorporated into all-organic donor-acceptor systems, but have not yet been shown to reduce organometallic centers. This study describes a set of dyads in which perylenediimide (PDI) or naphthalenediimide (NDI) chromophores are attached to Re(bpy)(CO)3 through either the bipyridine ligand or more directly to the Re center via a pyridine ligand. The chromophores are reduced with a mild reducing agent, after which excitation with long-wavelength red or near-infrared light leads to reduction of the Re complex. The kinetics of electron transfer from the photoexcited anions to the Re complex are monitored using transient visible/near-IR and mid-IR spectroscopy, complemented by theoretical spectroscopic assignments. The photo-driven charge shift from the reduced PDI or NDI to the complex occurs in picoseconds regardless of whether PDI or NDI is attached to the bipyridine or to the Re center, but back electron transfer is found to be three orders of magnitude slower with the chromophore attached to the Re center. These results will inform the design of future catalytic systems that incorporate RDI anions as chromophores.

16.
Chem Sci ; 8(2): 1642-1652, 2017 Feb 01.
Article in English | MEDLINE | ID: mdl-28451293

ABSTRACT

We introduce and characterize the complete set of possible isomers of IrIV(pyalk)2Cl2 (pyalk = 2-(pyridin-2-yl)propan-2-oate), providing valuable insights on the properties of Ir(iv) species. The pyridine alkoxide ligand strongly stabilizes high oxidation states, essential to accessing the catalytically relevant Ir(iv) state, and results in robust complexes that can be handled under ambient conditions, even permitting chromatographic separation. The redox properties are isomer-dependent, spanning a 300 mV range, rationalized with ligand-field theory and DFT calculations. The reported complexes exhibit very high kinetic inertness against isomerization, despite highly disparate predicted thermodynamic stabilities, presenting a unique opportunity to study all five possible isomeric complexes with the same ligand set.

17.
Photochem Photobiol ; 93(2): 626-631, 2017 03.
Article in English | MEDLINE | ID: mdl-28052331

ABSTRACT

Hyperforin is a constituent of St. John's wort and coexists with the singlet oxygen sensitizer hypericin. Density functional theory, molecular mechanics and Connolly surface calculations show that accessibility in the singlet oxygen "ene" reaction favors the hyperforin "southwest" and "southeast" prenyl (2-methyl-2-butenyl) groups over the northern prenyl groups. While the southern part of hyperforin is initially more susceptible to oxidation, up to 4 "ene" reactions of singlet oxygen can take place. Computational results assist in predicting the fate of adjacent hydroperoxides in hyperforin, where the loss of hydrogen atoms may lead to the formation of a hydrotrioxide and a carbonyl instead of a Russell reaction.


Subject(s)
Biological Products/chemistry , Phloroglucinol/analogs & derivatives , Photosensitizing Agents/chemistry , Singlet Oxygen/chemistry , Terpenes/chemistry , Hydrogen Peroxide/chemistry , Phloroglucinol/chemistry
18.
J Am Chem Soc ; 138(34): 10978-85, 2016 08 31.
Article in English | MEDLINE | ID: mdl-27454546

ABSTRACT

CuO is a nonhazardous, earth-abundant material that has exciting potential for use in solar cells, photocatalysis, and other optoelectronic applications. While progress has been made on the characterization of properties and reactivity of CuO, there remains significant controversy on how to control the precise band gap by tuning conditions of synthetic methods. Here, we combine experimental and theoretical methods to address the origin of the wide distribution of reported band gaps for CuO nanosheets. We establish reaction conditions to control the band gap and reactivity via a high-temperature treatment in an oxygen-rich environment. SEM, TEM, XRD, and BET physisorption reveals little to no change in nanostructure, crystal structure, or surface area. In contrast, UV-vis spectroscopy shows a modulation in the material band gap over a range of 330 meV. A similar trend is found in H2 temperature-programmed reduction where peak H2 consumption temperature decreases with treatment. Calculations of the density of states show that increasing the oxygen to copper coverage ratio of the surface accounts for most of the observed changes in the band gap. An oxygen exchange mechanism, supported by (18)O2 temperature-programmed oxidation, is proposed to be responsible for changes in the CuO nanosheet oxygen to copper stoichiometry. The changes induced by oxygen depletion/deposition serve to explain discrepancies in the band gap of CuO, as reported in the literature, as well as dramatic differences in catalytic performance.

19.
Chem Commun (Camb) ; 52(14): 2972-5, 2016 Feb 18.
Article in English | MEDLINE | ID: mdl-26781247

ABSTRACT

Hydroxamate binding modes and protonation states have yet to be conclusively determined. Molecular titanium(iv) phenylhydroxamate complexes were synthesized as structural and spectroscopic models, and compared to functionalized TiO2 nanoparticles. In a combined experimental-theoretical study, we find that the predominant binding form is monodeprotonated, with evidence for the chelate mode.

20.
J Phys Chem B ; 120(8): 1919-27, 2016 Mar 03.
Article in English | MEDLINE | ID: mdl-26562617

ABSTRACT

We assess the capabilities of eight popular density functional theory (DFT) functionals, in combination with several basis sets, as applied to calculations of vibrational sum frequency generation (SFG) spectra of the atmospherically relevant isoprene oxidation product trans-ß-isoprene epoxydiol (IEPOX) and one of its deuterated isotopologues at the fused silica/vapor interface. We use sum of squared differences (SSD) and total absolute error (TAE) calculations to estimate the performance of each functional/basis set combination in producing SFG spectra that match experimentally obtained spectra from trans-ß-IEPOX and one of its isotopologues. Our joined SSD/TAE analysis shows that while the twist angle of the methyl C3v symmetry axis of trans-ß-IEPOX relative to the surface is sensitive to the choice of DFT functional, the calculated tilt angle relative to the surface normal is largely independent of the functional and basis set. Moreover, we report that hybrid functionals such as B3LYP, ωB97X-D, PBE0, and B97-1 in combination with a modest basis set, such as 6-311G(d,p), provides good agreement with experimental data and much better performance than pure functionals such as PBE and BP86. However, improving the quality of the basis set only improves agreement with experimental data for calculations based on pure functionals. A conformational analysis, based on comparisons of calculated and experimental SFG spectra, suggests that trans-ß-IEPOX points all of its oxygen atoms toward the silica/vapor interface.

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