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1.
J Synchrotron Radiat ; 25(Pt 3): 892-898, 2018 May 01.
Article in English | MEDLINE | ID: mdl-29714202

ABSTRACT

A new fast X-ray absorption spectroscopy scanning method was recently implemented at the Hard X-ray Microprobe endstation P06, PETRA III, DESY, utilizing a Maia detector. Spectromicroscopy maps were acquired with spectra for X-ray absorption near-edge structure (XANES) acquisition in the sub-second regime. The method combines XANES measurements with raster-scanning of the sample through the focused beam. The order of the scanning sequence of the axes, one beam energy axis and two (or more) spatial axes, is a variable experimental parameter and, depending on it, the dwell at each location can be either single and continuous (if the energy axis is the inner loop) or in shorter discontinuous intervals (if a spatial axis is innermost). The combination of improved spatial and temporal resolution may be necessary for rapidly changing samples, e.g. for following in operando chemical reactions or samples highly susceptible to beam damage where the rapid collection of single XANES spectra avoids issues with the emergence of chemical changes developing from latent damage. This paper compares data sets collected on a specially designed test pattern and a geological thin-section scanning the energy as inner, middle and outer axis in the sequence. The XANES data of all three scanning schemes is found to show excellent agreement down to the single-pixel level.

2.
Opt Express ; 25(19): 23424-23436, 2017 Sep 18.
Article in English | MEDLINE | ID: mdl-29041643

ABSTRACT

Scanning X-ray fluorescence tomography was once considered impractical due to prohibitive measurement time requirements but is now common for investigating metal distributions within small systems. A recent look-ahead to the possibilities of 4th-generation synchrotron light sources [J. Synchrotron. Radiat. 21, 1031 (2014)] raised the possibility of a spiral-scanning measurement scheme where motion overheads are almost completely eliminated. Here we demonstrate the spiral scanning measurement and use Fourier ring correlation analysis to interrogate sources of resolution degradation. We develop an extension to the Fourier ring correlation formalism that enables direct determination of resolution from the measured sinogram data, greatly enhancing its power as a diagnostic tool for computed tomography.

3.
J Synchrotron Radiat ; 23(Pt 6): 1550-1560, 2016 11 01.
Article in English | MEDLINE | ID: mdl-27787262

ABSTRACT

The high brilliance of third-generation synchrotron sources increases the demand for faster detectors to utilize the available flux. The Maia detector is an advanced imaging scheme for energy-dispersive detection realising dwell times per image-pixel as low as 50 µs and count rates higher than 10 × 106 s-1. In this article the integration of such a Maia detector in the Microprobe setup of beamline P06 at the storage ring PETRA III at the Deutsches Elektronen-Synchrotron (DESY) in Hamburg, Germany, is described. The analytical performance of the complete system in terms of rate-dependent energy resolution, scanning-speed-dependent spatial resolution and lower limits of detection is characterized. The potential of the Maia-based setup is demonstrated by key applications from materials science and chemistry, as well as environmental science with geological applications and biological questions that have been investigated at the P06 beamline.

4.
J Synchrotron Radiat ; 21(Pt 5): 1031-47, 2014 Sep.
Article in English | MEDLINE | ID: mdl-25177992

ABSTRACT

X-ray nanoprobes require coherent illumination to achieve optic-limited resolution, and so will benefit directly from diffraction-limited storage rings. Here, the example of high-resolution X-ray fluorescence tomography is focused on as one of the most voracious demanders of coherent photons, since the detected signal is only a small fraction of the incident flux. Alternative schemes are considered for beam delivery, sample scanning and detectors. One must consider as well the steps before and after the X-ray experiment: sample preparation and examination conditions, and analysis complexity due to minimum dose requirements and self-absorption. By understanding the requirements and opportunities for nanoscale fluorescence tomography, one gains insight into the R&D challenges in optics and instrumentation needed to fully exploit the source advances that diffraction-limited storage rings offer.


Subject(s)
Microscopy, Fluorescence , Molecular Probe Techniques/instrumentation , X-Ray Diffraction/methods , X-Ray Microtomography/methods , Image Enhancement/instrumentation , Image Enhancement/methods , Nanoparticles , Optics and Photonics , Radiation Dosage , Synchrotrons , X-Ray Diffraction/instrumentation , X-Ray Microtomography/instrumentation
5.
PLoS One ; 7(2): e32685, 2012.
Article in English | MEDLINE | ID: mdl-22393436

ABSTRACT

Bioinorganic chemistry is critical to cellular function. Homeostasis of manganese (Mn), for example, is essential for life. A lack of methods for direct in situ visualization of Mn and other biological metals within intact multicellular eukaryotes limits our understanding of management of these metals. We provide the first quantitative subcellular visualization of endogenous Mn concentrations (spanning two orders of magnitude) associated with individual cells of the nematode, Caenorhabditis elegans.


Subject(s)
Caenorhabditis elegans/metabolism , Manganese/chemistry , Metals/chemistry , Animals , Caenorhabditis elegans/drug effects , Cation Transport Proteins/chemistry , Computational Biology/methods , Freeze Drying , Imaging, Three-Dimensional , Intestinal Mucosa/metabolism , Oxygen/chemistry , Tomography, X-Ray Computed/methods
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