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1.
Bioprocess Biosyst Eng ; 43(7): 1171-1183, 2020 Jul.
Article in English | MEDLINE | ID: mdl-32112148

ABSTRACT

Sludge reduction performance and bacterial community dynamics in a pilot-scale multi-stage digester system with prolonged sludge retention time were characterized. Throughout the operation period of 281 days, the total loading sludge and the total digested sludge were 4700 and 3300 kg-MLSS. After 114 days of operation, the residual MLSS (RMLSS) in the reactors for sludge treatment was maintained at 18-25 kg-RMLSS m-3, and the sludge reduction efficiency achieved 95% under the F/M ratio (kg-loading MLSS kg-RMLSS-1) of less than 0.018. Also, among the sludge components, both fixed suspended solids and volatile suspended solids were reduced. Based on the sludge reduction performance and the RNA-based bacterial community characteristics, the combined action of the maintenance metabolism, lysis-cryptic growth, and particulate inorganic matter is proposed as the sludge reduction mechanism in the multi-stage sludge treatment process.


Subject(s)
Bacteria/metabolism , Microbiota , Sewage/microbiology , Bacteria/classification , Bioreactors , Pilot Projects
2.
Waste Manag ; 100: 45-56, 2019 Dec.
Article in English | MEDLINE | ID: mdl-31520912

ABSTRACT

In this study, a biowindow with a piped gas collection network is proposed as an area-efficient landfill gas treatment system. A 9-m2 biowindow was constructed for treating landfill gas collected from an area of 450 m2 in a sanitary landfill, and its performance was evaluated for 224 days. The methane removal efficiency was 59-100% at 146.3-675.1 g-CH4 m-2 d-1. Odorous compounds were also removed by the biowindow, with a complex odor intensity removal rate of 93-100%. In particular, the removal efficiency for hydrogen sulfide and methanethiol, major contributors to the complex odor intensity, was 97% and 91%, respectively. Metagenomic analysis showed that the dominant bacterial genera shifted from Acinetobacter and Pseudomonas to Methylobacter and Methylocaldum due to the high concentration of methane. A high bacterial diversity was maintained, which may have contributed to the robust performance of the biowindow against environmental fluctuations. At 1/50th of the size of conventional biocovers, the proposed biowindow can greatly reduce the required installation area and represents a competitive method for the simultaneous treatment of methane and odor in landfills.


Subject(s)
Methane , Refuse Disposal , Odorants , Oxidation-Reduction , Waste Disposal Facilities
3.
Materials (Basel) ; 12(10)2019 May 19.
Article in English | MEDLINE | ID: mdl-31109125

ABSTRACT

Hydrogels incorporated with hydrophobic motifs have received considerable attention to recapitulate the cellular microenvironments, specifically for the bio-mineralization of a 3D matrix. Introduction of hydrophobic molecules into a hydrogel often results in irregular arrangement of the motifs, and further phase separation of hydrophobic domains, but limited efforts have been made to resolve this challenge in developing the hydrophobically-modified hydrogel. Therefore, this study presents an advanced integrative strategy to incorporate hydrophobic domains regularly in a hydrogel using self-assembled domains formed with polymer cross-linkers, building blocks of a hydrogel. Self-assemblies formed by polymer cross-linkers were examined as micro-domains to incorporate hydrophobic motifs in a hydrogel. The self-assembled structures in a pre-gelled solution were confirmed with the fluorescence analysis and the hydrophobicity of a hydrogel could be tuned by incorporating the hydrophobic chains in a controlled manner. Overall, the results of this study would greatly serve to tuning performance of a wide array of hydrophobically-modified hydrogels in drug delivery, cell therapies and tissue engineering.

4.
Waste Manag Res ; 36(12): 1137-1145, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30376763

ABSTRACT

The performance of a biocomplex textile prototype was evaluated as an alternative daily cover at an operational landfill site to mitigate odors and methane. The biocomplex textile prototype consisted of two layers of nonwoven fabric and biocarrier immobilized microorganisms and showed excellent removal of odors and methane compared to landfill cover soil. The complex odor intensity (odor dilution ratio (ODR)) on the surface of landfill cover soil was 1,000-10,000 ODR (average of 4,204 ODR), whereas it was 5-250 ODR (average of 55 ODR) on the surface of biocomplex textile. Hydrogen sulfide, which contributes a significant odor intensity, had an average concentration on the biocomplex textile of 8.64 parts-per-billion (ppb), compared to 1733.21 ppb on the landfill cover soil. The biocomplex textile also showed effective methane removal with methane concentrations of 0-1.2% (average of 0.3%) on the biocomplex textile compared to 0-20% (average of 5.3%) on the landfill cover soil. Bacterial community diversity in the biocomplex textile increased with time until an operating period of 66 days, after which diversity indices were maintained at a constant level. The dominant species were the methanotrophs Methylocaldum and Methylobacter, and the non-methanotrophs Acinetobacter, Serpens, Ohtaekwangia, and Actinophytocola. These results demonstrate that on-site biocomplex textile is a suitable alternative daily cover to mitigate odors and methane in landfills.


Subject(s)
Soil Microbiology , Waste Disposal Facilities , Methane , Oxidation-Reduction , Republic of Korea , Soil , Textiles
5.
Waste Manag ; 77: 30-42, 2018 Jul.
Article in English | MEDLINE | ID: mdl-30008412

ABSTRACT

A soil burial-composting method was proposed as a hybrid disposal method for infected carcasses. This is a modified soil burial technique that involves covering carcasses with compost to achieve a final compost bed of 1.0-1.2 m during the soil burial process. To evaluate the feasibility and applicability of the soil burial-composting method, a pilot-scale system was constructed to dispose of pig carcasses and monitored its performance for 346 days. Temperature around the pig carcasses in the compost bed increased gradually, and was in the range of 35-45 °C after 200 days. Mesophilic (Sporosarcina and Steroidobacter) and thermophilic (Truepera) bacteria were dominant in the compost bed. Based on odor gas profiling and the morphological properties of the carcasses excavated after 346 days, it was estimated that an advanced decay stage was reached after 243 days. Considering the results of previous studies, the carcass degradation rate achieved by soil burial-composting was faster than that of soil burial, but slower than that of the composting method. Sum of odor quotient (SOQ) in the upper soil bed was lower than the SOQ in the compost bed where the carcasses were buried. This result demonstrated that the upper soil bed functioned as a biofilter to mitigate odor gases emitted during degradation of the carcasses. The soil burial-composting disposal method is preferred over soil burial because the degradation of carcasses is faster, and over composting because odor complaints and compost usage can be minimized.


Subject(s)
Composting , Odorants , Animals , Gases , Soil , Swine
6.
Environ Res ; 166: 516-528, 2018 10.
Article in English | MEDLINE | ID: mdl-29957505

ABSTRACT

Unpleasant odors emitted from landfills have been caused environmental and societal problems. For odor abatement, two pilot-scale biocovers were installed at a sanitary landfill site in South Korea. Biocovers PBC1 and PBC2 comprised a soil mixture with different ratios of earthworm casts as an inoculum source and were operated for 240 days. Their odor removal efficiencies were evaluated, and their bacterial community structures were characterized using pyrosequencing. In addition, the correlation between odor removability and bacterial community dynamics was assessed using network analysis. The removal efficiency of complex odor intensity in the two biocovers ranged from 81.1% to 97.8%. Removal efficiencies of sulfur-containing odors (hydrogen sulfide, methanethiol, dimethyl sulfide, and dimethyl disulfide), which contributed most to complex odor intensity, were greater than 91% in both biocovers. Despite the fluctuations in ambient temperature (-8.2 to 31.3 °C) and inlet complex odor intensity (10,000-42,748 of odor dilution ratio), biocovers PBC1 and PBC2 displayed stable deodorizing performance. A high ratio of earthworm casts as an inoculum source led to high odor removability during the first 25 days of operation, but different mixing ratios of earthworm casts did not significantly affect overall odor removability. A bacterial community analysis showed that Methylobacter, Arthrobacter, Acinetobacter, Rhodanobacter, and Pedobacter were the dominant genera in both biocovers. Network analysis results indicated that Steroidobacter, Cystobacter, Methylosarcina, Solirubrobacter, and Pseudoxanthomonas increased in relative abundance with time and were major contributors to odor removal, although these bacteria had a relatively low abundance compared to the overall bacterial community. These data contribute to a more comprehensive understanding of the relationship between bacterial community dynamics and deodorizing performance in biocovers.


Subject(s)
Air Pollutants/analysis , Bacteria/classification , Odorants/analysis , Refuse Disposal , Soil Microbiology , Animals , Methane , Oligochaeta , Oxidation-Reduction , Republic of Korea , Waste Disposal Facilities
7.
Article in English | MEDLINE | ID: mdl-29469603

ABSTRACT

Soil burial and composting methods have been widely used for the disposal of pig carcasses. The relationship between bacterial community structure and odor emission was examined using extended local similarity analysis (eLSA) during the degradation of pig carcasses in soil and compost. In soil, Hyphomicrobium, Niastella, Rhodanobacter, Polaromonas, Dokdonella and Mesorhizobium were associated with the emission of sulfur-containing odors such as hydrogen sulfide, methyl mercaptan and dimethyl disulfide. Sphingomonas, Rhodanobacter, Mesorhizobium, Dokdonella, Leucobacter and Truepera were associated with the emission of nitrogen-containing odors including ammonia and trimetylamine. In compost, however, Carnobacteriaceae, Lachnospiaceae and Clostridiales were highly correlated with the emission of sulfur-containing odors, while Rumincoccaceae was associated with the emission of nitrogen-containing odors. The emission of organic acids was closely related to Massilia, Sphaerobacter and Bradyrhizobiaceae in soil, but to Actinobacteria, Sporacetigenium, Micromonosporaceae and Solirubrobacteriales in compost. This study suggests that network analysis using eLSA is a useful strategy for exploring the mechanisms of odor emission during biodegradation of pig carcasses.


Subject(s)
Bacteria/growth & development , Biodegradation, Environmental , Bone and Bones/metabolism , Environmental Monitoring/methods , Odorants/analysis , Swine , Ammonia/metabolism , Animals , Bacteria/classification , Bacteria/metabolism , Composting , Disulfides/metabolism , Food-Processing Industry , Nitrogen/metabolism , Organic Chemicals/metabolism , Soil/chemistry , Soil Microbiology , Specimen Handling/methods , Specimen Handling/statistics & numerical data
8.
Waste Manag ; 71: 277-286, 2018 Jan.
Article in English | MEDLINE | ID: mdl-29089227

ABSTRACT

Landfills are key anthropogenic emission sources for odors and methane. For simultaneous mitigation of odors and methane emitted from landfills, a pilot-scale biocover (soil:perlite:earthworm cast:compost, 6:2:1:1, v/v) was constructed at a sanitary landfill in South Korea, and the biocover performance and its bacterial community dynamics were monitored for 240 days. The removal efficiencies of odor and methane were evaluated to compare the odor dilution ratios or methane concentrations at the biocover surface and landfill soil cover surface where the biocover was not installed. The odor removal efficiency was maintained above 85% in all seasons. The odor dilution ratios ranged from 300 to 3000 at the biocover surface, but they were 6694-20,801 at the landfill soil cover surface. Additionally, the methane removal efficiency was influenced by the ambient temperature; the methane removal efficiency in winter was 35-43%, while the methane removability was enhanced to 85%, 86%, and 96% in spring, early summer, and late summer, respectively. The ratio of methanotrophs to total bacterial community increased with increasing ambient temperature from 5.4% (in winter) to 12.8-14.8% (in summer). In winter, non-methanotrophs, such as Acinetobacter (8.8%), Rhodanobacter (7.5%), Pedobacter (7.5%), and Arthrobacter (5.7%), were abundant. However, in late summer, Methylobacter (8.8%), Methylocaldum (3.4%), Mycobacterium (1.1%), and Desulviicoccus (0.9%) were the dominant bacteria. Methylobacter was the dominant methanotroph in all seasons. These seasonal characteristics of the on-site biocover performance and its bacterial community are useful for designing a full-scale biocover for the simultaneous mitigation of odors and methane at landfills.


Subject(s)
Methane/analysis , Odorants/analysis , Refuse Disposal , Waste Disposal Facilities , Animals , Bacteria/metabolism , Oxidation-Reduction , Republic of Korea , Seasons , Soil , Soil Microbiology
9.
Waste Manag ; 72: 339-348, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29129467

ABSTRACT

Space-saving biocomplex textiles, which can be used as covers or rolled up as needed, have been demonstrated as alternative daily covers for the simultaneous mitigation of greenhouse gases (GHGs) and odors in landfills. The biocomplex textiles were made by inserting inorganic biocarriers (perlite (P), tobermolite (T) and their mixture (P/T)) between nonwoven fabrics. Methane (CH4) and dimethyl sulfide (DMS) were used as model compounds for GHGs and odors, and a CH4 and DMS co-degrading microbial consortium was used as an inoculum source. CH4 and DMS could be biologically degraded by methanotrophs and sulfur-oxidizing bacteria in the biocomplex textiles. Both biocomplex textiles made with either P or T were able to maintain the removability for CH4 and DMS after storage for 70 days, although their removal efficiencies for CH4 and DMS were 70-71% and 62-65% of those before storage, respectively. CH4 and DMS were simultaneously removed in lab-scale landfill simulation reactors employed with the biocomplex textiles. After 17 days of starvation, only 2-3 days were needed to recover their removability. Among the 3 kinds of biocarriers evaluated, the biocomplex textile generated using the P/T showed the highest removability and was the most stable. The maximum elimination capacities of the biocomplex textile generated with the P/T were 11.5 g-CH4·m-2-fabric·d-1 and 0.5 g-DMS·m-2-fabric·d-1, respectively. These results suggest that the biocomplex textiles are promising alternative daily covers to mitigate the emission of greenhouse gas and odor in operational landfills.


Subject(s)
Methane , Odorants , Textiles , Waste Disposal Facilities , Microbial Consortia , Oxidation-Reduction , Soil
10.
J Microbiol Biotechnol ; 27(12): 2199-2210, 2017 Dec 28.
Article in English | MEDLINE | ID: mdl-29032644

ABSTRACT

Soil burial is the most widely used disposal method for infected pig carcasses, but composting has gained attention as an alternative disposal method because pig carcasses can be decomposed rapidly and safely by composting. To understand the pig carcass decomposition process in soil burial and by composting, pilot-scale test systems that simulated soil burial and composting were designed and constructed in the field. The envelope material samples were collected using special sampling devices without disturbance, and bacterial community dynamics were analyzed by high-throughput pyrosequencing for 340 days. Based on the odor gas intensity profiles, it was estimated that the active and advanced decay stages were reached earlier by composting than by soil burial. The dominant bacterial communities in the soil were aerobic and/or facultatively anaerobic gram-negative bacteria such as Pseudomonas, Gelidibacter, Mucilaginibacter, and Brevundimonas. However, the dominant bacteria in the composting system were anaerobic, thermophilic, endospore-forming, and/or halophilic gram-positive bacteria such as Pelotomaculum, Lentibacillus, Clostridium, and Caldicoprobacter. Different dominant bacteria played important roles in the decomposition of pig carcasses in the soil and compost. This study provides useful comparative date for the degradation of pig carcasses in the soil burial and composting systems.


Subject(s)
Abattoirs , Bacteria/classification , Composting , Manure/microbiology , Microbial Consortia , Soil Microbiology , Animals , Bacteria/metabolism , High-Throughput Nucleotide Sequencing , Meat/microbiology , Swine
11.
Article in English | MEDLINE | ID: mdl-28763254

ABSTRACT

A new decolorizing white-rot fungus, OBR105, was isolated from Mount Odae in South Korea and identified by the morphological characterization of its fruit body and spores and partial 18s rDNA sequences. The ligninolytic enzyme activity of OBR105 was studied to characterize their decolorizing mechanism using a spectrophotometric enzyme assay. For the evaluation of the decolorization capacity of OBR105, the isolate was incubated in an erlenmeyer flask and in an airlifte bioreator with potato dextrose broth (PDB) medium supplemented with each dye. In addition, the decolorization efficiency of real textile wastewater was evaluated in an airlift bioreactor inoculated with the isolate. The isolate was identified as Bjerkandera adusta and had ligninolytic enzymes such as laccase, lignin peroxidase (LiP), and Mn-dependent peroxidase (MnP). Its LiP activity was higher than its MnP and laccase activities. B. adusta OBR105 successfully decolorized reactive dyes (red 120, blue 4, orange 16, and black 5) and acid dyes (red 114, blue 62, orange 7, and black 172). B. adusta OBR105 decolorized 91-99% of 200 mg L-1 of each dye (except acid orange 7) within 3 days in a PDB medium at 28°C, pH 5, and 150 rpm. This fungus decolorized only 45% of 200 mg L-1 acid orange 7 (single azo-type dye) within 3 days, and the decolorization efficiency did not increase by prolonging the cultivation time. In the air-lift bioreactor, B. adusta OBR105 displayed a high decolorization capacity, greater than 90%, for 3 acid dyes (red 114, blue 62, and black 172) and 1 reactive dye (blue 4) within 10-15 h of treatment. B. adusta OBR105 could decolorize real textile wastewater in the air-lift bioreactor. This result suggests that an air-lift reactor employing B. adusta OBR105 is a promising bioreactor for the treatment of dye wastewater.


Subject(s)
Bioreactors/microbiology , Coloring Agents/analysis , Coriolaceae/growth & development , Water Pollutants, Chemical/analysis , Water Purification/methods , Coloring Agents/chemistry , Coriolaceae/enzymology , Laccase/metabolism , Peroxidases/metabolism , Republic of Korea , Textiles , Water Pollutants, Chemical/chemistry
12.
Article in English | MEDLINE | ID: mdl-28463583

ABSTRACT

The mycoremediation has been considered as a promising method for decolorizing dye wastewater. To explore new bioresource for mycoremediation, a new white-rot fungus that could decolorize various dyes commonly used in textile industries was isolated, and its ligninolytic enzyme activity and decolorization capacity were characterized. The isolated CBR43 was identified as Trametes versicolor based on the morphological properties of its fruit body and spores, as well as through partial 18S rDNA gene sequences. Isolated CBR43 displayed high activities of laccase and Mn-dependent peroxidase, whereas its lignin peroxidase activity was relatively low. These ligninolytic enzyme activities in potato dextrose broth (PDB) medium were enhanced by the addition of yeast extract (1-10 g L-1). In particular, lignin peroxidase activity was increased more than 5 times in the PDB medium amended with 10 g L-1 of yeast extract. The CBR43 decolorized more than 90% of 200 mg L-1 acid dyes (red 114, blue 62 and black 172) and reactive dyes (red 120, blue 4, orange 16 and black 5) within 6 days in the PDB medium. CBR43 decolorized 67% of 200 mg L-1 acid orange 7 within 9 days. The decolorization efficiencies for disperse dyes (red 1, orange 3 and black 1) were 51-80% within 9 days. The CBR43 could effectively decolorize high concentrations of acid blue 62 and acid black 172 (500-700 mg L-1). The maximum dye decolorization rate was obtained at 28°C, pH 5, and 150 rpm in the PDB medium. T. versicolor CBR43 had high laccase and Mn-dependent peroxidase activities, and could decolorize a wide variety of dyes such as acid, disperse and reactive textile dyes. This fungus had decolorizing activities of azo-type dyes as well as anthraquinone-type dyes. T. versicolor CBR43 is one of promising bioresources for the decolorization of textile wastewater including various dyes.


Subject(s)
Azo Compounds/analysis , Benzenesulfonates/analysis , Coordination Complexes/analysis , Naphthalenesulfonates/analysis , Trametes/growth & development , Water Pollutants, Chemical/analysis , Water Purification/methods , Biodegradation, Environmental , Laccase/metabolism , Peroxidases/metabolism , Textile Industry , Trametes/enzymology , Wastewater/chemistry
13.
Sci Rep ; 7(1): 2168, 2017 05 19.
Article in English | MEDLINE | ID: mdl-28526845

ABSTRACT

Climate change causes permafrost thawing, and we are confronted with the unpredictable risk of newly discovered permafrost microbes that have disease-causing capabilities. Here, we first characterized the detailed chemical structure of the lipid A moiety from a Pseudomonas species that was isolated from thawing arctic permafrost using MALDI-based mass spectrometric approaches (i.e., MALDI-TOF MS and MALDI-QIT-TOF MSn). The MALDI multi-stage mass spectrometry (MS) analysis of lipid A extracted from the Pseudomonas sp. strain PAMC 28618 demonstrated that the hexaacyl lipid A ([M-H]- at m/z 1616.5) contains a glucosamine (GlcN) disaccharide backbone, two phosphates, four main acyl chains and two branched acyl chains. Moreover, the lipid A molecule-based structural activity relationship with other terrestrial Gram-negative bacteria indicated that strain PAMC 28618 has an identical lipid A structure with the mesophilic Pseudomonas cichorii which can cause rot disease in endive (Cichorium endivia) and that their bacterial toxicities were equivalent. Therefore, the overall lipid A validation process provides a general strategy for characterizing bacteria that have been isolated from arctic permafrost and analyzing their respective pathogenicities.


Subject(s)
Lipid A/chemistry , Permafrost/microbiology , Pseudomonas/physiology , Soil Microbiology , Molecular Structure , Phenotype , Phylogeny , Plant Diseases , Pseudomonas/classification , Pseudomonas/pathogenicity , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Structure-Activity Relationship
14.
J Microbiol Biotechnol ; 27(1): 155-160, 2017 Jan 28.
Article in English | MEDLINE | ID: mdl-27666980

ABSTRACT

The dye decolorization rate in a cell-free culture broth of the white-rot fungus Trametes versicolor CBR43 was studied, including the effects of inhibitors of NaCl, Zn(II), and Cd(II) on dye decolorization activity. The maximum rates of dye decolorization in cell-free culture broth were 1,410, 44.7, 41.2, and 0.19 µmol·l-1·min-1 for Acid Blue 62, Acid Black 175, Reactive Blue 4, and Acid Red 114, respectively. The inhibition effects of NaCl, Zn(II), and Cd(II) on dye decolorization were quantitatively compared using the half maximal inhibition concentration (IC50), which indicates the concentration of an inhibitor required for 50% inhibition. Based on IC50 values, dye decolorization in the cell-free culture broth of CBR43 was most potently inhibited by Cd(II), whereas the inhibitory effect of NaCl was relatively low. The dye decolorization rates and IC50 data can be used in the design and development of a dyewastewater treatment process using T. versicolor CBR43 and its operating factors.

15.
Anal Chem ; 87(2): 858-63, 2015 Jan 20.
Article in English | MEDLINE | ID: mdl-25525717

ABSTRACT

N-Acyl homoserine lactones (AHLs), quorum sensing molecules produced by Gram-negative bacteria, are used as important secondary metabolites for antibacterial drug development and cell-to-cell communication. Although various analytical techniques have been developed for detection and quantitation of AHLs from more complex bacterial culture media, only a few methods have been applied to AHL identification in physiological samples. Here, we developed a highly sensitive and reliable MALDI-based 3-oxo AHL quantitation method by employing Girard's reagent T (GT) to produce a permanent cationic charge state [M](+) at the ketone group of AHLs. After extracting AHLs from the supernatant of bacterial cultures using ethyl acetate, the extracts were subsequently derivatized with GT without any additional purification or desalting steps. The chemical derivatization of 3-oxo AHLs dramatically enhanced sensitivity (up to 60 000 times) by lowering the limit of detection (LOD, ∼0.5 fmol)/limit of quantitation (LOQ, ∼2.5 fmol). Additionally, the GT-derivatized 3-oxo AHLs allowed more accurate quantitative analysis from the Pseudomonas aeruginosa PAO1 culture supernatants. This method may be applied for developing high-throughput and sensitive detection methods of quorum sensing signal molecules in biofilm-related clinical applications such as virulence factor characterization and antibacterial drug development.


Subject(s)
4-Butyrolactone/analogs & derivatives , Ketones/chemistry , Pseudomonas aeruginosa/metabolism , Quorum Sensing , Virulence , 4-Butyrolactone/analysis , Biofilms , Chromatography, Liquid , Humans , Pseudomonas aeruginosa/isolation & purification , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
16.
J Microbiol Biotechnol ; 23(5): 715-8, 2013 May.
Article in English | MEDLINE | ID: mdl-23648863

ABSTRACT

Density of catalytic organisms can determine the biodegradation capacity and specific biodegradation rate (SBR). A new index, biodegradation capacity utilization (BCU, %), was developed for estimating the extent of actual biodegradation of a gas compound over the full capacity. Three methanotrophic cultures were serially diluted (1-1/25), and methane SBR and BCU were measured. Consistently, biomass reduction increased the SBR and decreased the BCU. Linearity (p < 0.05, r > 0.97) between the BCU and cell density indicated the reflection of biodegradation capacity by BCU. Therefore, BCU is indicative of whether the density of catalytic organisms is pertinent for SBR evaluation of low-soluble gaseous compounds.


Subject(s)
Bacteria/chemistry , Bacteria/metabolism , Biodegradation, Environmental , Bioreactors/microbiology , Kinetics , Methane/metabolism , Oxidation-Reduction
17.
Appl Microbiol Biotechnol ; 95(4): 1051-9, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22134640

ABSTRACT

A mixed methane-oxidizing biofilm was characterized, concurrently using a number of advanced techniques. Community analysis results by microarray exhibited that type II members dominated the methanotrophic community, in which Methylocystis was most abundant, followed by Methylosinus. Observation results by fluorescent in situ hybridization and confocal microscopy showed multiple biofilm colonies that were irregular, bell-shaped, with mean thickness of approximately 20 µm. Image analysis results indicated that the relative abundance of methanotrophs peaked at a depth of about 5 µm. Although the biofilm colonies differed in size, methanotrophs accounted for 4-9%. Gaussian and linear regression results between the biofilm volumes and types I (r (2) = 0.86) and II volumes (r (2) = 0.92), respectively, revealed that type I members played a role in the growth of the biofilm but only below a threshold volume, whereas type II members supported the overall growth. Geostatistical analyses results revealed concentration of types I and II methanotrophic individuals with decreasing depth, and randomness between the spatial locations and population levels. Collectively, the methane-oxidizing biofilm was a highly organized system with methanotrophs and their cohabitants.


Subject(s)
Biofilms , Methane/metabolism , Methylocystaceae/metabolism , Microscopy, Confocal/methods , Base Sequence , DNA Primers , In Situ Hybridization, Fluorescence , Methylocystaceae/genetics , Oligonucleotide Array Sequence Analysis , Oxidation-Reduction , Real-Time Polymerase Chain Reaction
18.
Bioresour Technol ; 103(1): 279-85, 2012 Jan.
Article in English | MEDLINE | ID: mdl-22019268

ABSTRACT

Two perchlorate-reducing bacterial consortia (PRBC) were obtained by enrichment cultures from polluted marine sediments. Non-salt-tolerant PRBC (N-PRBC) was enriched without the addition of NaCl, and salt tolerant-PRBC (ST-PRBC) was enriched with 30 g-NaCl L(-1). Although the perchlorate reduction rates decreased with increasing NaCl concentration, ST-PRBC (resp., N-PRBC) could reduce perchlorate until 75 g-NaCl L(-1) (resp., 30 g-NaCl L(-1)). The reduction yield (1.34±0.05 mg-perchlorate per mg-acetate) and maximum perchlorate reduction rate (86 mg-perchlorateL(-1) h(-1)) of ST-PRBC was higher than those (1.16±0.03 mg-perchlorate per mg-acetate and 48 mg-perchlorate L(-1) h(-1)) of N-PRBC. Kinetic analysis showed that NaCl acted as an uncompetitive inhibitor against both PRBCs. The inhibition constants were 25 and 41 mg-NaCl L(-1) for N-PRBC and ST-PRBC, respectively.


Subject(s)
Bacteria/metabolism , Perchlorates/metabolism , Salt Tolerance , Bacteria/drug effects , Bacteria/genetics , Biodegradation, Environmental/drug effects , Genes, Bacterial/genetics , Kinetics , Molecular Sequence Data , Oxidation-Reduction/drug effects , Phylogeny , Salt Tolerance/drug effects , Salt Tolerance/genetics , Sodium Chloride/pharmacology , Time Factors
19.
Article in English | MEDLINE | ID: mdl-22029699

ABSTRACT

The performance of a polyurethane (PU) biofilter was evaluated using different operating modes (unidirectional flow (UF) and flow-directional switching (FDS) operations) under transient loading conditions (intermittent and shutdown). Gas mixtures containing benzene, toluene and xylene (BTX) were employed as model gases. Quantitative real-time PCR methods were used for targeting the tmoA gene responsible for BTX degradation and estimating density of the BTX-degraders in the PU filter bed. Although the overall BTX Removal efficiencies at the outlet (50 h(-1) of space velocity) were similar between the UF and FDS biofilters, the removability of BTX in the FDS biofilter was higher than that in the UF biofilter until the 3rd sampling position (68 h(-1) of space velocity). The BTX removal potentials and tmoA gene copy numbers of the FDS biofilter remained constant, irrespective of the distances from the inlet, but those of the UF biofilter increased with increasing distance from the inlet position. These results indicate that an even distribution of BTX degraders in the FDS filter bed contributed to better BTX removal performance. After a 10 day-shutdown, the performances of the UF and SDF biofilters were rapidly restored within 1 day.


Subject(s)
Air Pollutants/isolation & purification , Air Pollution/prevention & control , Bacteria/metabolism , Filtration/instrumentation , Filtration/methods , Volatile Organic Compounds/isolation & purification , Air Pollutants/analysis , Bacteria/genetics , Benzene/analysis , Benzene/isolation & purification , Chromatography, Gas , DNA Copy Number Variations , Polyurethanes/chemistry , Real-Time Polymerase Chain Reaction , Toluene/analysis , Toluene/isolation & purification , Volatile Organic Compounds/analysis , Xylenes/analysis , Xylenes/isolation & purification
20.
J Microbiol Biotechnol ; 21(7): 753-6, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21791963

ABSTRACT

A methane-oxidizing bacterium was isolated from the enriched culture of a landfill cover soil. The closest relative of the isolate, designated M6, is Methylocystis sp. Based on a kinetic analysis, the maximum specific methane oxidation rate and saturation constant were 4.93 mmol·g--dry cell weight--1·h⁻¹ and 23 microM, respectively. This was the first time a kinetic analysis was performed using pure methanotrophic culture. The methane oxidation by M6 was investigated in the presence of aromatic (m- and p-xylene and ethylbenzene) or sulfur (hydrogen sulfide, dimethyl sulfide, methanthiol) compounds. The methane oxidation was inhibited by the presence of aromatic or sulfur compounds.


Subject(s)
Methane/metabolism , Methylocystaceae/classification , Methylocystaceae/isolation & purification , Soil Microbiology , Anti-Bacterial Agents/pharmacology , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Hydrocarbons, Cyclic/pharmacology , Kinetics , Methylocystaceae/drug effects , Methylocystaceae/metabolism , Molecular Sequence Data , Oxidation-Reduction , RNA, Ribosomal, 16S/genetics , Republic of Korea , Sequence Analysis, DNA , Sulfur Compounds/pharmacology
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