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2.
Environ Sci Technol ; 40(8): 2578-85, 2006 Apr 15.
Article in English | MEDLINE | ID: mdl-16683595

ABSTRACT

A field bioremediation assay using the oleophilic fertilizer S200 was carried out 10 months after the Prestige heavy fuel-oil spill on a beach of the Cantabrian coast (North Spain). The field survey showed that S200 significantly enhanced the biodegradation rate, particularly of high molecular weight n-alkanes, alkylcyclohexanes, and benzenes, and alkylated PAHs, paralleling the results previously found in vitro. The most significant molecular bioremediation indicators were the depletion of diasteranes and C-27 sterane components. Enhanced isomeric selectivity was also observed within the C1-phenanthrenes and dibenzothiophenes. Through the analysis of some target aliphatic and aromatic hydrocarbons a number of chemical indicators for assessing the efficiency of field bioremediation as well as identifying the source of highly weathered samples collected in the area after the spill are defined.


Subject(s)
Fertilizers , Fuel Oils , Accidents , Biodegradation, Environmental , Environmental Pollutants , Hydrocarbons/analysis , Hydrocarbons/metabolism , Spain
3.
Chemosphere ; 63(10): 1648-59, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16325226

ABSTRACT

When hydrocarbon-contaminated soil is subjected to bioremediation technology, hydrocarbon depletion is typically marked by an initially rapid reduction rate. This rate decreases over time and frequently a residual concentration remains in the soil. This kinetic has been attributed primarily to the enrichment of more recalcitrant fractions, as well as to the lack of resting hydrocarbon bioavailability. Thus, at the end of the bioremediation process, a part of the residual hydrocarbon soil concentration represents the non-bioavailable fraction, which is difficult to degrade by microbial populations and which poses a minor hazard. Therefore, determination of the bioavailable fraction in a bioremediation project represents both an estimation of the maximum level of achievable biodegradation, as well as an additional indication of the environmental health hazard. In the present study, aged creosote-contaminated soil was subjected to biostimulation processes, and the bioavailable fraction for several target polycyclic aromatic hydrocarbons (PAHs) was calculated using a mild extraction with cyclodextrines. The amount of PAH extracted corresponded to the desorbing fraction and can be regarded as the bioavailable fraction. The non-desorbing fraction data obtained from this procedure were compared to the remaining PAH concentrations following bioremediation treatment of soil microcosms. These results permitted the establishment of a theoretical biodegradation limit based on the desorbing fraction. In addition, neither accumulation of intermediate metabolites, nor the formation of bound-residues or reduced acute toxicity was observed.


Subject(s)
Creosote , Polycyclic Aromatic Hydrocarbons/analysis , Soil Microbiology , Soil Pollutants/analysis , Adsorption , Bacteria/drug effects , Bacteria/metabolism , Biodegradation, Environmental , Cyclodextrins/chemistry , Polycyclic Aromatic Hydrocarbons/chemistry , Polycyclic Aromatic Hydrocarbons/metabolism , Polycyclic Aromatic Hydrocarbons/toxicity , Soil Pollutants/metabolism , Soil Pollutants/toxicity
4.
Can J Microbiol ; 51(11): 897-909, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16333329

ABSTRACT

A microbial consortium (AM) obtained by sequential enrichment in liquid culture with a polycyclic aromatic hydrocarbon (PAH) mixture of three- and four-ringed PAHs as a sole source of carbon and energy was examined using a triple-approach method based on various cultivation strategies, denaturing gradient gel electrophoresis (DGGE), and the screening of 16S and 18S rRNA gene clone libraries. Eleven different sequences by culture-dependent techniques and seven by both DGGE and clone libraries were obtained. The comparison of three variable regions (V3-V5) of the 16S rRNA gene between the sequences obtained yielded 19 different microbial components. Proteobacteria were the dominant group, representing 83% of the total, while the Cytophaga-Flexibacter-Bacteroides group (CFB) was 11% and the Ascomycota fungi 6%. Beta-proteobacteria were predominant in the DGGE and clone library methods, whereas they were a minority in culturable strains. The highest diversity and number of noncoincident sequences were achieved by the cultivation method that showed members of the alpha-, beta-, and gamma-Proteobacteria; CFB bacterial group; and Ascomycota fungi. Only six of the 11 strains isolated showed PAH-degrading capability. The bacterial strain (AMS7) and the fungal strain (AMF1), which were similar to Sphingomonas sp. and Fusarium sp., respectively, achieved the greatest PAH depletion. The results indicate that polyphasic assessment is necessary for a proper understanding of the composition of a microbial consortium.


Subject(s)
Bacteria/classification , Bacteria/isolation & purification , Biodiversity , Fungi/classification , Fungi/isolation & purification , Polycyclic Aromatic Hydrocarbons/metabolism , Ascomycota/classification , Ascomycota/genetics , Ascomycota/isolation & purification , Ascomycota/metabolism , Bacteria/genetics , Bacteria/metabolism , Bacteroides/classification , Bacteroides/genetics , Bacteroides/isolation & purification , Bacteroides/metabolism , Biodegradation, Environmental , Cytophaga/classification , Cytophaga/genetics , Cytophaga/isolation & purification , Cytophaga/metabolism , DNA Fingerprinting , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Fungal/chemistry , DNA, Fungal/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Electrophoresis, Polyacrylamide Gel , Flexibacter/classification , Flexibacter/genetics , Flexibacter/isolation & purification , Flexibacter/metabolism , Fungi/genetics , Fungi/metabolism , Molecular Sequence Data , Phylogeny , Proteobacteria/classification , Proteobacteria/genetics , Proteobacteria/isolation & purification , Proteobacteria/metabolism , RNA, Ribosomal, 16S/genetics , RNA, Ribosomal, 18S/chemistry , RNA, Ribosomal, 18S/genetics , Sequence Homology, Nucleic Acid , Soil Microbiology
5.
Appl Environ Microbiol ; 71(11): 7008-18, 2005 Nov.
Article in English | MEDLINE | ID: mdl-16269736

ABSTRACT

Bacterial community dynamics and biodegradation processes were examined in a highly creosote-contaminated soil undergoing a range of laboratory-based bioremediation treatments. The dynamics of the eubacterial community, the number of heterotrophs and polycyclic aromatic hydrocarbon (PAH) degraders, and the total petroleum hydrocarbon (TPH) and PAH concentrations were monitored during the bioremediation process. TPH and PAHs were significantly degraded in all treatments (72 to 79% and 83 to 87%, respectively), and the biodegradation values were higher when nutrients were not added, especially for benzo(a)anthracene and chrysene. The moisture content and aeration were determined to be the key factors associated with PAH bioremediation. Neither biosurfactant addition, bioaugmentation, nor ferric octate addition led to differences in PAH or TPH biodegradation compared to biodegradation with nutrient treatment. All treatments resulted in a high first-order degradation rate during the first 45 days, which was markedly reduced after 90 days. A sharp increase in the size of the heterotrophic and PAH-degrading microbial populations was observed, which coincided with the highest rates of TPH and PAH biodegradation. At the end of the incubation period, PAH degraders were more prevalent in samples to which nutrients had not been added. Denaturing gradient gel electrophoresis analysis and principal-component analysis confirmed that there was a remarkable shift in the composition of the bacterial community due to both the biodegradation process and the addition of nutrients. At early stages of biodegradation, the alpha-Proteobacteria group (genera Sphingomonas and Azospirillum) was the dominant group in all treatments. At later stages, the gamma-Proteobacteria group (genus Xanthomonas), the alpha-Proteobacteria group (genus Sphingomonas), and the Cytophaga-Flexibacter-Bacteroides group (Bacteroidetes) were the dominant groups in the nonnutrient treatment, while the gamma-Proteobacteria group (genus Xathomonas), the beta-Proteobacteria group (genera Alcaligenes and Achromobacter), and the alpha-Proteobacteria group (genus Sphingomonas) were the dominant groups in the nutrient treatment. This study shows that specific bacterial phylotypes are associated both with different phases of PAH degradation and with nutrient addition in a preadapted PAH-contaminated soil. Our findings also suggest that there are complex interactions between bacterial species and medium conditions that influence the biodegradation capacity of the microbial communities involved in bioremediation processes.


Subject(s)
Bacteria/growth & development , Creosote/metabolism , Ecosystem , Polycyclic Aromatic Hydrocarbons/metabolism , Soil Microbiology , Soil Pollutants/metabolism , Bacteria/classification , Bacteria/genetics , Bacteria/metabolism , Biodegradation, Environmental , Colony Count, Microbial , DNA, Bacterial/analysis , Electrophoresis/methods , Molecular Sequence Data , Petroleum/metabolism , Phylogeny , Polymerase Chain Reaction , RNA, Ribosomal, 16S/genetics
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