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1.
PLoS One ; 15(7): e0235655, 2020.
Article in English | MEDLINE | ID: mdl-32628740

ABSTRACT

Biallelic variants in RNU4ATAC, a non-coding gene transcribed into the minor spliceosome component U4atac snRNA, are responsible for three rare recessive developmental diseases, namely Taybi-Linder/MOPD1, Roifman and Lowry-Wood syndromes. Next-generation sequencing of clinically heterogeneous cohorts (children with either a suspected genetic disorder or a congenital microcephaly) recently identified mutations in this gene, illustrating how profoundly these technologies are modifying genetic testing and assessment. As RNU4ATAC has a single non-coding exon, the bioinformatic prediction algorithms assessing the effect of sequence variants on splicing or protein function are irrelevant, which makes variant interpretation challenging to molecular diagnostic laboratories. In order to facilitate and improve clinical diagnostic assessment and genetic counseling, we present i) an update of the previously reported RNU4ATAC mutations and an analysis of the genetic variations affecting this gene using the Genome Aggregation Database (gnomAD) resource; ii) the pathogenicity prediction performances of scores computed based on an RNA structure prediction tool and of those produced by the Combined Annotation Dependent Depletion tool for the 285 RNU4ATAC variants identified in patients or in large-scale sequencing projects; iii) a method, based on a cellular assay, that allows to measure the effect of RNU4ATAC variants on splicing efficiency of a minor (U12-type) reporter intron. Lastly, the concordance of bioinformatic predictions and cellular assay results was investigated.


Subject(s)
RNA, Small Nuclear/metabolism , Spliceosomes/metabolism , Child , Databases, Genetic , Dwarfism/genetics , Dwarfism/pathology , Fetal Growth Retardation/genetics , Fetal Growth Retardation/pathology , Fibroblasts/cytology , Fibroblasts/metabolism , Genetic Variation , Humans , Microcephaly/genetics , Microcephaly/pathology , Nucleic Acid Conformation , Osteochondrodysplasias/genetics , Osteochondrodysplasias/pathology , RNA Splicing , RNA, Small Nuclear/chemistry , RNA, Small Nuclear/genetics
2.
J Vis Exp ; (128)2017 10 27.
Article in English | MEDLINE | ID: mdl-29155715

ABSTRACT

We present a method to characterize achromatic Fresnel lenses for photovoltaic applications. The achromatic doublet on glass (ADG) Fresnel lens is composed of two materials, a plastic and an elastomer, whose dispersion characteristics (refractive index variation with wavelength) are different. We first designed the lens geometry and then used ray-tracing simulation, based on the Monte Carlo method, to analyze its performance from the point of view of both optical efficiency and the maximum attainable concentration. Afterwards, ADG Fresnel lens prototypes were manufactured using a simple and reliable method. It consists of a prior injection of plastic parts and a consecutive lamination, together with the elastomer and a glass substrate to fabricate the parquet of ADG Fresnel lenses. The accuracy of the manufactured lens profile is examined using an optical microscope while its optical performance is evaluated using a solar simulator for concentrator photovoltaic systems. The simulator is composed of a xenon flash lamp whose emitted light is reflected by a parabolic mirror. The collimated light has a spectral distribution and an angular aperture similar to the real Sun. We were able to assess the optical performance of the ADG Fresnel lenses by taking photographs of the irradiance spot cast by the lens using a charge-coupled device (CCD) camera and measuring the photocurrent generated by several types of multi junction (MJ) solar cells, which have been previously characterized at a solar simulator for concentrator solar cells. These measurements have demonstrated the achromatic behavior of ADG Fresnel lenses and, as a consequence, the suitability of the modelling and manufacturing methods.


Subject(s)
Electrochemical Techniques/instrumentation , Electrochemical Techniques/methods , Lenses , Light , Refractometry/instrumentation
3.
Opt Express ; 24(18): A1245-56, 2016 Sep 05.
Article in English | MEDLINE | ID: mdl-27607727

ABSTRACT

This paper presents a novel Fresnel lens capable of significantly reducing chromatic aberration in solar applications. The optical performance of this achromatic lens has been analyzed through ray-tracing simulations, showing a concentration factor three times higher than that attained by a classic silicone on glass (SOG) Fresnel lens while maintaining the same acceptance angle. This should avoid the need for a secondary optical element, reducing the cost associated with its manufacturing and assembly and increasing the module reliability. The achromatic lens is made of inexpensive plastic and elastomer which allows a highly scalable and cost-competitive manufacturing process similar to the one currently used for the fabrication of SOG Fresnel lenses.

4.
Opt Express ; 21(4): 4864-74, 2013 Feb 25.
Article in English | MEDLINE | ID: mdl-23482020

ABSTRACT

Hybrid Lighting-CPV concept mixes illumination using low-cost fiber optics for light transmission with conventional Concentrating Photovoltaic (CPV) technology. This approach may offer an important increase in the value of a CPV system. Direct illumination from sunlight with fibers does not require the double light-electricity-light energy conversion allowing for efficient lighting using just a small area of the CPV system, preferably those areas with lower CPV efficiency conversion. Simultaneously the need of concentration and tracking required is completely covered by the infrastructure of the CPV system. In this work, we present a theoretical study of the losses in optical fibers in order to establish the design criteria for the hybrid system. Losses caused by chromatic aberration increase with f-number while transmission losses in the fiber decrease.


Subject(s)
Fiber Optic Technology/instrumentation , Lighting/instrumentation , Energy Transfer , Equipment Design , Equipment Failure Analysis
5.
Opt Express ; 20(7): 8136-47, 2012 Mar 26.
Article in English | MEDLINE | ID: mdl-22453483

ABSTRACT

Two important aspects must be considered when optimizing antireflection coatings (ARCs) for multijunction solar cells to be used in concentrators: the angular light distribution over the cell created by the particular concentration system and the wide spectral bandwidth the solar cell is sensitive to. In this article, a numerical optimization procedure and its results are presented. The potential efficiency enhancement by means of ARC optimization is calculated for several concentrating PV systems. In addition, two methods for ARCs direct characterization are presented. The results of these show that real ARCs slightly underperform theoretical predictions.


Subject(s)
Computer-Aided Design , Electric Power Supplies , Lenses , Models, Theoretical , Solar Energy , Computer Simulation , Equipment Design , Equipment Failure Analysis , Light , Scattering, Radiation
6.
Opt Express ; 16(19): 14894-901, 2008 Sep 15.
Article in English | MEDLINE | ID: mdl-18795026

ABSTRACT

A solar simulator for measuring performance of large area concentrator photovoltaic (CPV) modules is presented. Its illumination system is based on a Xenon flash light and a large area collimator mirror, which simulates natural sun light. Quality requirements imposed by the CPV systems have been characterized: irradiance level and uniformity at the receiver, light collimation and spectral distribution. The simulator allows indoor fast and cost-effective performance characterization and classification of CPV systems at the production line as well as module rating carried out by laboratories.


Subject(s)
Computer-Aided Design , Electric Power Supplies , Lasers, Gas , Lighting/instrumentation , Models, Theoretical , Solar Energy , Computer Simulation , Equipment Design , Equipment Failure Analysis
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