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1.
Environ Sci Pollut Res Int ; 28(44): 62487-62498, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34212324

ABSTRACT

Among natural disasters, flood is increasingly recognized as a serious worldwide concern that causes the most damages in parts of agriculture, fishery, housing, and infrastructure and strongly affects economic and social activities. Universally, there is a requirement to increase our conception of flood vulnerability and to outstretch methods and tools to assess it. Spatial analysis of flood vulnerability is part of non-structural measures to prevent and reduce flood destructive effects. Hence, the current study proposes a methodology for assessing the flood vulnerability in the area of watershed in a severely flooded area of Iran (i.e., Kashkan Watershed). First interdependency analysis among criteria (including population density (PD), livestock density (LD), percentage of farmers and ranchers (PFR), distance to industrial and mining areas (DTIM), distance to tourist and cultural heritage areas (DTTCH), land use, distance to residential areas (DTRe), distance to road (DTR), and distance to stream (DTS)) was conducted using the decision-making trial and evaluation laboratory (DEMATEL) method. Hence, the cause and effect factors and their interaction levels in the whole network were investigated. Then, using the interdependency relationships among criteria, a network structure from flood vulnerability factors to determine their importance of factors was constructed, and the analytical network process (ANP) was applied. Finally, with the aim to overcome ambiguity, reduce uncertainty, and keep the data variability, an appropriate fuzzy membership function was applied to each layer by analyzing the relationship of each layer with flood vulnerability. Importance analysis indicated that land use (0.197), DTS (0.181), PD (0.180), DTRe (0.140), and DTR (0.138) were the most important variables. The flood vulnerability map produced by the integrated method of DEMATEL-ANP-fuzzy showed that about 19.2% of the region has a high to very high flood vulnerability.


Subject(s)
Disasters , Floods , Agriculture , Laboratories , Rivers
2.
Environ Monit Assess ; 193(5): 299, 2021 Apr 24.
Article in English | MEDLINE | ID: mdl-33895895

ABSTRACT

Soil moisture, vegetation cover, and land surface temperature are vital variables in water-energy balance, eco-hydrological processes, and water resources management, which can be influenced by watershed management activities. This research focused on the spatial and temporal variability of soil moisture, vegetation cover, land surface temperature, and Temperature-Vegetation Dryness Index (TVDI) under a biological watershed management practice in the Taleghan paired watershed, namely, treated (TW) and control watersheds (CW), in Alborz province, Iran. In this research, along with the remote sensing techniques, the soil moisture and vegetation cover data were measured and statistically analyzed in the three aspects of both TW and CW during a growth period from May to October 2017. The results indicated that soil moisture, vegetation cover, and land surface temperature values in the paired watershed were significantly different at the 0.01 level during the study period. The increased vegetation cover in the TW had an inverse effect on the land surface temperature and TVDI, while directly impacted the soil moisture content. The average TVDI in the CW was 0.83, while this index was found to be 0.69 in the TW. Unlike the vegetation cover and soil moisture, the results revealed that the southern aspects had the highest TVDI and land surface temperature compared to the northern and eastern aspects of both watersheds. However, the increased vegetation cover as a biological watershed management activity in the steep terrain and mountainous areas of TW led to an increased soil moisture and a decreased land surface temperature and soil dryness. As a result, decreasing soil dryness in the TW can exert vital controls on the water resources and increasing water availability. In the arid and semiarid countries such as Iran, a proper watershed management activity can effectively increase soil moisture and water availability in the watersheds. In particular, the vegetation cover protection and biological practices can be considered as practical solutions in the rehabilitation of exhausted watersheds in arid and semiarid environments.


Subject(s)
Remote Sensing Technology , Soil , Environmental Monitoring , Iran , Water Resources
3.
Endocrine ; 54(1): 129-138, 2016 Oct.
Article in English | MEDLINE | ID: mdl-27179656

ABSTRACT

The aim of our study was to inhibit BRAF kinase expression and investigate its effect on cellular functions in thyroid carcinomas. 8505C (BRAF V600E/V600E) undifferentiated thyroid carcinoma cell line and B-CPAP (BRAF V600E/V600E) papillary thyroid carcinoma cell line were used to develop doxycycline-inducible anti-BRAF shRNA stable cell lines. The inhibitions of BRAF expression in these cells were confirmed with qPCR and Western blot. Impacts of BRAF protein inhibition on cellular functions and signalling pathways were observed through Western blot, proliferation and colony formation assays. BRAF kinase expression was inhibited 83 % in undifferentiated thyroid carcinoma and 82 % in papillary thyroid carcinoma (p < 0.05). As a result of BRAF kinase inhibition, reduction in MEK kinase activity was seen (p < 0.05) in both thyroid cancer cell lines (72 and 75 %, respectively). Initially, big drop in proliferation (p < 0.05) was observed (52 and 54 %, respectively), but later an increasing proliferation trend was noticed in BRAF kinase-inhibited cell lines. In addition, reduction in colony formation (p < 0.05) was seen in BRAF kinase-inhibited carcinoma cells (13 and 15 %, respectively). On the other hand, increase in AKT kinase activity (63 and 70 %, respectively; p < 0.05) was discovered in both BRAF kinase-inhibited carcinoma cells. Increased activation of alternative proliferation pathways (as determined by the increase of AKT kinase activity) counteracts the effect of BRAF kinase inhibition in thyroid carcinomas. Thus, alternative proliferation pathways should be inhibited for therapeutic suppression of BRAF-induced proliferation in thyroid carcinomas.


Subject(s)
Carcinoma, Papillary/pathology , Cell Proliferation/genetics , Proto-Oncogene Proteins B-raf/genetics , Thyroid Neoplasms/pathology , Carcinoma, Papillary/genetics , Cell Line, Tumor , Gene Silencing , Humans , RNA, Small Interfering , Thyroid Neoplasms/genetics
4.
Hum Pathol ; 51: 75-85, 2016 May.
Article in English | MEDLINE | ID: mdl-27067785

ABSTRACT

MicroRNA-126 (miR-126) expression has been shown to be associated with angiogenesis. The aim of the current study is to evaluate the functional roles of miR-126 in dysregulation of VEGF expression and cancer progression in thyroid carcinomas. The expression of VEGF-A and miR-126 were measured in 101 thyroid carcinomas tissues (including 51 conventional papillary thyroid carcinoma, 37 follicular variant of papillary thyroid carcinoma, and 13 undifferentiated thyroid carcinomas), 13 matched lymph nodes with metastatic thyroid carcinoma, 21 benign thyroid tissues, and 5 thyroid carcinoma cell lines (both papillary and undifferentiated carcinomas). Then, exogenous miR-126 was transfected, and the expressions of VEGF-A were determined (Western blot technique). Proliferation assay, cell cycle analysis, and apoptosis assays were used to evaluate the role of miR-126 in these events. Significant underexpression of miR-126 levels in thyroid cancer tissues and cell lines was detected using real-time polymerase chain reaction. Introducing exogenous miR-126 into the cancer cell lines resulted in a significant reduction of VEGF-A protein expression. Marked inhibition in proliferation, cell cycle arrest in G0-G1, and promotion of total apoptosis were also noted. The modulatory role of miR-126 on expression of VEGF-A and its tumor suppressive roles were demonstrated for the first time in thyroid cancer. The current experiments provided specific information on the functional consequences of VEGF manipulation via microRNA on cancer.


Subject(s)
Carcinoma/pathology , Gene Expression Regulation, Neoplastic/genetics , MicroRNAs/genetics , Thyroid Neoplasms/pathology , Vascular Endothelial Growth Factor A/biosynthesis , Apoptosis/genetics , Blotting, Western , Carcinoma/blood supply , Carcinoma/genetics , Carcinoma/metabolism , Carcinoma, Papillary , Cell Proliferation/genetics , Disease Progression , Humans , Neovascularization, Pathologic/genetics , Oligonucleotide Array Sequence Analysis , Real-Time Polymerase Chain Reaction , Thyroid Cancer, Papillary , Thyroid Neoplasms/blood supply , Thyroid Neoplasms/genetics , Thyroid Neoplasms/metabolism , Transfection
5.
Hum Pathol ; 53: 105-13, 2016 07.
Article in English | MEDLINE | ID: mdl-27001434

ABSTRACT

We aim to investigate the expression profiles of galectin family genes (galectins-1, 2, 3, 4, 7, 8, 9, 10, and 11) in colorectal carcinomas. Messenger RNA (mRNA) expression of galectin family members (1, 2, 3, 4, 7, 8, 9, 10, and 12) was analyzed by real-time polymerase chain reaction in colorectal tissues from 201 patients (54 noncancer colorectal tissues, 49 adenomas, and 98 adenocarcinomas). Galectin-1 and galectin-3 protein expressions were determined by immunohistochemistry. In general, high galectin mRNA expression was noted in colorectal carcinomas in early stages of their pathogenesis. Significant differences in galectins-2, 3, 7, 8, and 10 mRNA expression were associated with pathologic stages (P<.05). Increased prevalence of galectins-2, 7, 8, and 10 mRNA overexpression was noted in nonmetastatic colorectal carcinomas (P<.05). Galectin-1 and galectin-3 proteins were present in the nucleus and cytoplasm of the colorectal tissues and expressed significantly higher in colorectal carcinomas when compared to colorectal adenomas (61% and 95%, respectively). Patients with colorectal carcinoma with high levels of galectin-3 mRNA and protein expression showed better prognosis (P=.052). To conclude, many novel correlations between the deregulation of galectin family genes and various clinicopathological features in colorectal adenocarcinoma were noted. Overexpression of galectins at the mRNA level and proteins were predominant in earlier stages of colorectal carcinomas. These altered expression patterns of galectin genes suggest the multifunctional role of galectin genes in the regulation of colorectal cancer development, progression, and metastasis.


Subject(s)
Adenocarcinoma/genetics , Biomarkers, Tumor/genetics , Colorectal Neoplasms/genetics , Galectins/genetics , Transcriptome , Adenocarcinoma/chemistry , Adenocarcinoma/secondary , Adenocarcinoma/surgery , Biomarkers, Tumor/analysis , Colorectal Neoplasms/chemistry , Colorectal Neoplasms/pathology , Colorectal Neoplasms/surgery , Disease Progression , Disease-Free Survival , Galectins/analysis , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Humans , Immunohistochemistry , Neoplasm Recurrence, Local , Neoplasm Staging , RNA, Messenger/genetics , Survival Analysis , Time Factors , Tissue Array Analysis , Treatment Outcome , Up-Regulation
6.
BMC Med Educ ; 16: 46, 2016 Feb 03.
Article in English | MEDLINE | ID: mdl-26842495

ABSTRACT

BACKGROUND: The ability to interpret an X-Ray is a vital skill for graduating medical students which guides clinicians towards accurate diagnosis and treatment of the patient. However, research has suggested that radiological interpretation skills are less than satisfactory in not only medical students, but also in residents and consultants. METHODS: This study investigated the effectiveness of e-learning for the development of X-ray interpretation skills in pre-clinical medical students. Competencies in clinical X-Ray interpretation were assessed by comparison of pre- and post-intervention scores and one year follow up assessment, where the e-learning course was the 'intervention'. RESULTS: Our results demonstrate improved knowledge and skills in X-ray interpretation in students. Assessment of the post training students showed significantly higher scores than the scores of control group of students undertaking the same assessment at the same time. CONCLUSIONS: The development of the Internet and advances in multimedia technologies has paved the way for computer-assisted education. As more rural clinical schools are established the electronic delivery of radiology teaching through websites will become a necessity. The use of e-learning to deliver radiology tuition to medical students represents an exciting alternative and is an effective method of developing competency in radiological interpretation for medical students.


Subject(s)
Clinical Competence/standards , Education, Medical/methods , Radiographic Image Interpretation, Computer-Assisted/methods , Radiology/education , Students, Medical , Analysis of Variance , Australia , Humans , Program Evaluation
7.
J Mol Endocrinol ; 55(3): 183-96, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26342107

ABSTRACT

miR-205 plays a crucial role in angiogenesis and has been found in association with several types of cancers. The aims of this study were to investigate the clinical and functional roles of miR-205 on as the major initiator and modulator of angiogenesis in thyroid cancer. 101 thyroid carcinomas, including 51 conventional and 37 follicular variants of papillary thyroid carcinomas, and 13 undifferentiated thyroid carcinomas in addition to 13 lymph nodes with metastatic thyroid carcinoma were recruited to be compared with 14 nodular goitre and seven normal thyroid tissues. Five thyroid carcinoma cell lines, of papillary and undifferentiated origin with and without history of metastasis, were also used. Expression of vascular endothelial growth factor A (VEGFA) and miR-205 were measured and exogenous miR-205 were transfected to observe the changes of VEGFA (by immunofluorescence and western blot techniques). Proliferation assay, cell cycle analysis and apoptosis assays were also used to evaluate the role of miR-205 in these events. Significant under-expression of miR-205 and over-expression of VEGFA mRNA and protein were noticed in thyroid cancer tissues and cell lines compared to normal thyroid control. Transfection of miR-205 into the cancer cell lines caused significant reduction of VEGFA protein and significant inhibition in cell proliferation, arrest in G0-G1 of the cell cycle and promotion of total apoptosis (P<0.05). The angiogenic and tumour-suppressive roles of miRNA-205 were demonstrated for the first time in thyroid cancer. The current experiments provided specific information on the functional consequences of VEGF manipulation via miRNA on cancer.


Subject(s)
Gene Expression Regulation, Neoplastic , MicroRNAs/genetics , Neovascularization, Pathologic/genetics , Thyroid Neoplasms/genetics , Thyroid Neoplasms/pathology , Apoptosis/genetics , Base Sequence , Binding Sites , Carcinoma/genetics , Carcinoma/pathology , Carcinoma, Papillary , Cell Cycle/genetics , Cell Cycle Checkpoints/genetics , Cell Line, Tumor , Cell Transformation, Neoplastic/genetics , Cell Transformation, Neoplastic/metabolism , Disease Progression , Gene Expression Profiling , Humans , MicroRNAs/chemistry , Neoplasm Metastasis , Neoplasm Staging , RNA Interference , RNA, Messenger/genetics , Thyroid Cancer, Papillary , Vascular Endothelial Growth Factor A/chemistry , Vascular Endothelial Growth Factor A/genetics
8.
Exp Mol Pathol ; 99(3): 492-7, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26403329

ABSTRACT

BACKGROUND AND OBJECTIVES: BRAF is an oncogene which involves in pathogenesis of many thyroid carcinomas.The aim of our study was to investigate whether the downstream signalling pathway of BRAF and AKT kinase signalling pathways were active in BRAF V600E mutated thyroid carcinoma cells. METHODS: Five thyroid (papillary and undifferentiated) carcinoma cell lines and one non-cancer thyroid cell line were screened for their BRAF V600E mutation status by immunofluorescent staining and Western blot. BRAF V600E mutated thyroid carcinoma cell lines were used to test the activation status of both ERK and AKT kinase proteins through immunofluorescent studies and Western blots. RESULTS: Expressions of BRAF V600E mutated protein were confirmed in four thyroid (papillary and undifferentiated) carcinoma cell lines. In these cell lines, both active ERK and active AKT kinase proteins were found in BRAF V600E mutated thyroid carcinoma cells by immunofluorescent staining and Western blots experiments. CONCLUSIONS: In BRAF V600E mutated thyroid carcinomas, active ERK and active AKT kinase proteins were noted. They are able to stimulate multiple downstream signalling pathways which ultimately result in increased proliferation and survival activities for cancer cells. Therefore, consideration needs to put on multiple targets when deciding molecular target therapies for patients with BRAF V600E mutated thyroid carcinoma.


Subject(s)
Mutation/genetics , Proto-Oncogene Proteins B-raf/genetics , Signal Transduction/genetics , Thyroid Neoplasms/genetics , Carcinoma, Papillary/genetics , Carcinoma, Papillary/pathology , Cell Line, Tumor , Cell Proliferation , Humans , MAP Kinase Signaling System/genetics , Oncogene Protein v-akt/metabolism , Thyroid Neoplasms/pathology
9.
Exp Cell Res ; 339(2): 342-50, 2015 Dec 10.
Article in English | MEDLINE | ID: mdl-26384552

ABSTRACT

BACKGROUND: The objectives of this study are to investigate the expression of miR-126 and evaluate its effect on proliferation in undifferentiated thyroid carcinoma. METHODS: miR-126 expression of undifferentiated thyroid carcinoma cell lines 8505C (BRAF(V600E/V600E)), BHT-101 (BRAF(V600E/WT)) and MB-1 (BRAF(WT/WT)) were quantified with q-PCR. These cell lines were transiently transfected with exogenous miR-126 (mimic). Following transfection, proliferation effects were observed through MTS proliferation assay and colony formation abilities. Immunofluorescence imaging and Western blot assay were also done to check target proteins expression. RESULTS: Under-expression (p<0.05) of miR-126 was noted in BRAF(V600E) mutated undifferentiated thyroid carcinoma cells (8505C and BHT-101), but no change in expression was noted in non BRAF(V600E) mutated undifferentiated thyroid carcinoma cells (MB-1). In addition, a 30-50% drop in proliferation ability and a 35-45% reduction in colony formation capability were noticed in miR-126 mimic transfected group when compared to control group. Furthermore, immunofluorescence images showed reduced expression of p85ß and p-AKT protein in miR-126 mimic transfected cells when compared to un-transfected cells. Also, Western blot analysis revealed a 34-40% suppression of p85ß protein and a 21-53% drop in active AKT kinase (p-AKT) protein in miR-126 mimic transfected group when compared to control group. CONCLUSIONS: Expression of miR-126 was down-regulated in BRAF(V600E) mutated undifferentiated thyroid carcinoma. In addition, miR-126 was found to act as proliferation suppressor targeting PIK3R2 gene and reducing p85ß (a regulatory subunit of PI3K kinase) protein translation and lower AKT kinase activity. Therefore, miR-126 could be a potential therapeutic tool in the treatment of undifferentiated thyroid carcinoma.


Subject(s)
MicroRNAs/metabolism , Phosphatidylinositol 3-Kinases/metabolism , Proto-Oncogene Proteins c-akt/metabolism , Signal Transduction/genetics , Thyroid Neoplasms/genetics , Thyroid Neoplasms/pathology , Cell Proliferation/genetics , Cell Survival/genetics , Humans , MicroRNAs/genetics , Phosphatidylinositol 3-Kinases/genetics , Thyroid Neoplasms/metabolism , Tumor Cells, Cultured
10.
Curr Cancer Drug Targets ; 14(8): 737-51, 2014.
Article in English | MEDLINE | ID: mdl-25329673

ABSTRACT

Altered expression of the microRNA-34 family has been determined to be involved in the pathogenesis of many cancers. In this review, the current knowledge of the cancer-related mechanisms in relation to the modulatory effects of microRNA-34 family were analysed. Expression analysis of the microRNA-34 family has suggested that its members play significant roles in many aspects of cancer biology including proliferation, invasion/metastasis, apoptosis/cell survival, cell cycle/cell growth, migration, senescence/aging, angiogenesis, epigenetic silencing and methylation by regulation of the expression of their target genes. Thus, microRNA-34 family members could act as prognostic markers and therapeutic targets in human cancers.


Subject(s)
MicroRNAs/genetics , Neoplasms/genetics , Animals , Apoptosis/genetics , Cell Cycle/genetics , Cell Movement/genetics , Cell Proliferation/genetics , DNA Methylation/genetics , Epigenesis, Genetic , Gene Expression , Humans , Neoplasms/pathology
11.
Curr Cancer Drug Targets ; 14(7): 621-37, 2014.
Article in English | MEDLINE | ID: mdl-25308719

ABSTRACT

Evidences have demonstrated key mediatory roles of microRNA-205 (miR-205) in normal physiology and its aberrant expression in many cancers. Indeed, miR-205 has been identified as both a tumour suppressive and oncogenic miRNA playing crucial roles in tumourigenesis through regulating different cellular pathways such as cell survival, apoptosis, angiogenesis and metastasis. As a tumour suppressor, miR-205 acts as an inhibitor of cell proliferation, migration and invasion. On the other hand, as an oncogene, miR-205 promotes tumour initiation and development. All these functions act through different target genes in various types of cancers. Also, miR-205 displays potential as a therapeutic target for different cancers. To conclude, miR-205 has important clinical and pathological correlations in different cancers and may act as a diagnostic and prognostic marker as well as new molecular target for cancer therapy.


Subject(s)
Antineoplastic Agents/therapeutic use , MicroRNAs/antagonists & inhibitors , Models, Biological , Molecular Targeted Therapy , Neoplasms/drug therapy , Animals , Apoptosis/drug effects , Biomarkers/metabolism , Carcinogenesis/drug effects , Carcinogenesis/metabolism , Cell Proliferation/drug effects , Epithelial-Mesenchymal Transition/drug effects , Gene Expression Regulation, Neoplastic/drug effects , Humans , MicroRNAs/metabolism , Neoplasms/metabolism , Neoplasms/pathology
12.
Dent Update ; 41(6): 518-20, 522-4, 2014.
Article in English | MEDLINE | ID: mdl-25195484

ABSTRACT

UNLABELLED: Orofacial viral infections may be less common but appear in different clinical forms. Often these infections get initially treated by antibiotics which obviously will have limited or no effect. The authors review the current concepts of orofacial viral infections, causative agents, their classification and clinical manifestations and a basis for treatment. CLINICAL RELEVANCE: Most viral infections do not require any specific treatment except in patients who are immunosuppressed or immunodeficient. Appropriate diagnosis and timely management of orofacial viral lesions are important irrespective of whether it is localized or a manifestation of a systemic infection.


Subject(s)
Herpesviridae Infections/diagnosis , Mouth Diseases/virology , Papillomavirus Infections/diagnosis , Alphaherpesvirinae/classification , Alphapapillomavirus/classification , Betaherpesvirinae/classification , Coxsackievirus Infections/diagnosis , Gammaherpesvirinae/classification , HIV Infections/diagnosis , Humans
13.
Exp Mol Pathol ; 97(2): 298-304, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25102298

ABSTRACT

MicroRNA-34 is involved in pathogenesis in cancer by targeting different tumor-related genes. It could be a biomarker for predicting the prognosis of patients with cancer. In addition, miR-34 is involved in the tumor angiogenesis. Understanding the mechanism of the miR-34 in cancer and tumor angiogenesis will open horizons for development of anti-cancer and anti-angiogenesis drugs.


Subject(s)
MicroRNAs/genetics , Neoplasms/genetics , Neovascularization, Pathologic/genetics , Animals , Humans , MicroRNAs/metabolism , Neoplasms/metabolism , Neoplasms/physiopathology , Neovascularization, Pathologic/metabolism
14.
Exp Cell Res ; 326(1): 166-73, 2014 Aug 01.
Article in English | MEDLINE | ID: mdl-24973512

ABSTRACT

The aims of the present study are to investigate the clinicopathological correlations of JK-1(FAM134B) expression and its relationship to carcinogenesis in a colorectal adenoma-adenocarcinoma model. JK-1(FAM134B) protein expression was studied in a colon cancer cell line by Western blot and immunocytochemistry. JK-1(FAM134B) expression profiles at mRNA and protein levels were investigated in cancer tissues from 236 patients with colorectal adenocarcinoma and 32 patients with colorectal adenoma using real-time polymerase chain reaction and immunohistochemistry. The findings were then correlated with the clinicopathological features of these tumours. JK-1(FAM134B) protein was demonstrated in the colon cancer cells by Western blot. The protein was located in the nuclei of the tumour cells at both cellular and tissue levels. In colorectal adenocarcinomas, lower levels of JK-1(FAM134B) protein expression were associated with younger age (p=0.032), larger tumour size (p=0.004), advanced cancer stages (p=0.016) and higher rates of cancer recurrence (p=0.04). Also, lower levels of JK-1(FAM134B) mRNA expression were associated with advanced cancer stages (p=0.02) and presence of lymphovascular invasion (p=0.014). Higher JK-1(FAM134B) mRNA and protein expression levels were identified in adenomas and non-neoplastic mucosae, compared to carcinomas (p=0.005). To conclude, JK-1(FAM134B) mRNA expression and JK1 (FAM134B) protein levels varied with the different stages of progression of colorectal tumours. The expression levels of the gene were associated with clinicopathological features in patients with colorectal adenocarcinoma suggesting that JK-1(FAM134B) gene has roles in controlling some steps in the development of the invasive phenotypes from colorectal adenoma to early staged as well as advanced staged colorectal adenocarcinomas.


Subject(s)
Adenocarcinoma/metabolism , Adenoma/metabolism , Biomarkers, Tumor/metabolism , Colorectal Neoplasms/metabolism , Neoplasm Proteins/metabolism , Neoplasm Recurrence, Local/metabolism , Adenocarcinoma/genetics , Adenocarcinoma/mortality , Adenocarcinoma/pathology , Adenoma/genetics , Adenoma/mortality , Adenoma/pathology , Adult , Aged , Aged, 80 and over , Animals , Biomarkers, Tumor/genetics , Blotting, Western , Cohort Studies , Colorectal Neoplasms/genetics , Colorectal Neoplasms/mortality , Colorectal Neoplasms/pathology , Female , Gene Expression Regulation, Neoplastic , Humans , Immunoenzyme Techniques , Intracellular Signaling Peptides and Proteins , Male , Membrane Proteins , Mice , Middle Aged , Neoplasm Proteins/genetics , Neoplasm Recurrence, Local/genetics , Neoplasm Recurrence, Local/mortality , Neoplasm Recurrence, Local/pathology , Neoplasm Staging , Prognosis , RNA, Messenger/genetics , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , Subcellular Fractions , Survival Rate , Tumor Cells, Cultured
15.
Exp Mol Pathol ; 97(1): 99-104, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24927874

ABSTRACT

BACKGROUND: JK1 is a novel cancer-related gene with unknown functional role in carcinogenesis. The aim of this study is to investigate the role of JK1 gene in carcinogenesis in an in vitro cell proliferation and migration analysis model. METHODS: Small hairpin RNAs (shRNA) were designed to knock-down JK1 expression in colon cancer cell line (SW480) using transduction ready lentiviral particles. Cell proliferation and cell migration assays were performed on multiple extracellular matrices to investigate the cellular effects of JK1 in colon cancer cells. A non-cancer colonic epithelial cell line (FHC) was used to compare the expression of JK1 in cancer cell line. RESULTS: JK1 knock-down did not affect cellular proliferation or survival in colon cancer. However, the manipulation increased cancer cell migration rates on collagen and fibronectin substrates. CONCLUSIONS: JK1 was shown for the first time to have a functional role in the pathogenesis of colon cancer. The results imply that JK1 represses the capacity of cancer cells to migrate within their tissue. They also concurred with the previous findings of JK1 activity correlations with clinical and pathological features in colon cancer. The capacity may have utility as a means to prevent cancer cells forming metastases.


Subject(s)
Cell Movement/genetics , Colonic Neoplasms/genetics , Colonic Neoplasms/pathology , Neoplasm Proteins/genetics , Cell Line, Tumor , Cell Proliferation , Gene Expression Regulation, Neoplastic , Gene Knockdown Techniques , Humans , Intracellular Signaling Peptides and Proteins , Membrane Proteins , Neoplasm Proteins/metabolism , RNA, Small Interfering
16.
Exp Mol Pathol ; 97(1): 31-6, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24825067

ABSTRACT

AIMS: The aims of the study are to characterize changes in JK-1 (FAM134B) at the DNA level in colorectal adenocarcinoma and adenoma and exploring the possible correlations with clinical and pathological features. METHOD: JK-1 gene DNA copy number changes were studied in 211 colorectal carcinomas, 32 colorectal adenoma and 20 colorectal non-cancer colorectal tissue samples by real-time quantitative polymerase chain reaction. The results were correlated with clinical and pathological parameters. RESULTS: Colorectal adenomas were more likely to be amplified than deleted with regard to JK-1 (FAM134B) DNA copy number change. The copy number level of JK-1 (FAM134B) DNA in colorectal adenocarcinomas was significantly lower in comparison to colorectal adenomas. Changes in JK-1 (FAM134B) DNA copy number were associated with histological subtypes, and cancer stage. Lower copy numbers were associated with higher tumor stage, lymph node stage and overall pathological stage of cancer. Conversely, higher DNA copy numbers were detected more often in the mucinous adenocarcinoma. CONCLUSIONS: This is the first study showing significant correlations of the JK-1 (FAM134B) gene copy number alterations with clinical and pathological features in a large cohort of pre-invasive and invasive colorectal malignancies. The changes in DNA copy number associated with progression of colorectal malignancies reflect that JK-1 (FAM134B) gene could play a role in controlling some steps in development of the invasive phenotypes.


Subject(s)
Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , Gene Dosage , Neoplasm Proteins/genetics , Adenocarcinoma/genetics , Adenocarcinoma/mortality , Adenocarcinoma/pathology , Adenocarcinoma, Mucinous/genetics , Adenocarcinoma, Mucinous/mortality , Adenocarcinoma, Mucinous/pathology , Adenoma/genetics , Adenoma/mortality , Adenoma/pathology , Adult , Aged , Aged, 80 and over , Colorectal Neoplasms/mortality , DNA Copy Number Variations , Disease-Free Survival , Female , Gene Expression Regulation, Neoplastic , Humans , Intracellular Signaling Peptides and Proteins , Lymph Nodes/pathology , Male , Membrane Proteins , Middle Aged , Pilot Projects
17.
Exp Mol Pathol ; 96(2): 212-8, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24530443

ABSTRACT

INTRODUCTION: Galectin family members have been demonstrated to be abnormally expressed in cancer at the protein and mRNA level. This study investigated the levels of galectin proteins and mRNA expression in a large cohort of patients with papillary thyroid carcinoma and matched lymph node metastases with particular emphasis on galectin-1 and galectin-3. METHODS: mRNA expression of galectin family members (1, 2, 3, 4, 7, 8, 9, 10 and 12) were analysed by real-time polymerase chain reaction in 65 papillary thyroid carcinomas, 30 matched lymph nodes with metastatic papillary thyroid carcinoma and 5 non-cancer thyroid tissues. Galectin-1 and 3 protein expression was determined by immunohistochemistry in these samples. RESULTS: Significant expression differences in all tested galectin family members (1, 2, 3, 4, 7, 8, 9, 10 and 12) were noted for mRNA in papillary thyroid carcinomas, with and without lymph node metastasis. Galectin-1 protein was more strongly expressed than galectin-3 protein in papillary thyroid carcinoma. Galectin-1 protein was found to be overexpressed in 32% of primary papillary thyroid carcinomas. A majority of lymph nodes with metastatic papillary thyroid carcinoma (53%) had significantly increased expression of galectin-1 protein, as did 47% of primaries with metastases. Galectin-1 mRNA levels were decreased in the vast majority (94%) of primary thyroid carcinomas that did not have metastases present. Galectin-3 protein levels were noted to be overexpressed in 15% of primary papillary thyroid carcinomas. In primary papillary thyroid carcinoma with lymph node metastases, 32% had over expression of galectin-3 protein. Overexpression of galectin-3 mRNA was noted in 58% of papillary thyroid carcinomas and 64% of lymph nodes bearing metastatic papillary thyroid carcinoma. Also, primary papillary thyroid carcinoma with lymph node metastases had significantly higher expression of galectin-3 mRNA compared to those without lymph node metastases. CONCLUSION: Galectin family members show altered expression at the mRNA level in papillary thyroid cancers. Overexpression of galectin-1 and 3 proteins were noted in papillary thyroid carcinoma with lymph node metastases. The results presented here demonstrated that galectin-1 and galectin-3 expression have important roles in clinical progression of papillary thyroid carcinoma.


Subject(s)
Carcinoma/genetics , Galectin 1/biosynthesis , Galectin 3/biosynthesis , Lymphatic Metastasis/genetics , Thyroid Neoplasms/genetics , Adult , Aged , Carcinoma/pathology , Carcinoma, Papillary , Female , Galectin 1/genetics , Galectin 3/genetics , Gene Expression Regulation, Neoplastic , Humans , Immunohistochemistry , Lymph Nodes/metabolism , Lymph Nodes/pathology , Male , Middle Aged , RNA, Messenger/biosynthesis , Thyroid Cancer, Papillary , Thyroid Neoplasms/pathology
18.
Curr Cancer Drug Targets ; 14(2): 128-43, 2014.
Article in English | MEDLINE | ID: mdl-24446739

ABSTRACT

BRAF is a major oncoprotein and oncogenic mutations in BRAF are found in a significant number of cancers, including melanoma, thyroid cancer, colorectal cancer and others. Consequently, BRAF inhibitors have been developed as treatment options for cancers with BRAF mutations which have shown some success in improving patient outcomes in clinical trials. Development of resistance to BRAF kinase inhibitors is common, however, overcoming this resistance is an area of significant concern for clinicians, patients and researchers alike. In this review, we identify the mechanisms of BRAF kinase inhibitor resistance and discuss the implications for strategies to overcome this resistance in the context of new approaches such as multi-kinase targeted therapies and emerging RNA interference based technologies.


Subject(s)
Antineoplastic Agents/therapeutic use , Colorectal Neoplasms/therapy , Drug Design , Genetic Therapy , Melanoma/therapy , Molecular Targeted Therapy , Protein Kinase Inhibitors/therapeutic use , Proto-Oncogene Proteins B-raf/antagonists & inhibitors , Skin Neoplasms/therapy , Thyroid Neoplasms/therapy , Animals , Colorectal Neoplasms/enzymology , Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , Drug Resistance, Neoplasm/genetics , Forecasting , Genetic Therapy/methods , Genetic Therapy/trends , Humans , Melanoma/enzymology , Melanoma/genetics , Melanoma/pathology , Molecular Targeted Therapy/trends , Proto-Oncogene Proteins B-raf/genetics , Proto-Oncogene Proteins B-raf/metabolism , Signal Transduction/drug effects , Skin Neoplasms/enzymology , Skin Neoplasms/genetics , Skin Neoplasms/pathology , Thyroid Neoplasms/enzymology , Thyroid Neoplasms/genetics , Thyroid Neoplasms/pathology
19.
Isotopes Environ Health Stud ; 50(2): 169-83, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24437989

ABSTRACT

Karst springs of the Zagros Mountains contribute a significant amount to agricultural and human water demands of western and south-western Iran. For an adequate management of available water resources in semi-arid and arid regions, sufficient hydrological monitoring is needed, and hydro-chemical and isotope hydrological data provide important additional information. About 350 water samples were collected from precipitation, river water, and karst springs of the upper part of the Karkheh River Basin (20,895 km(2)) located between 33°35(') and 34°55(') North and 46°22(') and 49°10(') East with elevations ranging from 928 to 3563 m above sea level. Sampling was conducted in monthly time resolution from August 2011 to July 2012. All samples were analysed for hydro-chemical parameters (pH, electrical conductivity, and major ions) and stable isotopes (deuterium, oxygen-18). Isotope values of precipitation indicate a local meteoric water line (Zagros MWL δ(2)H=6.8 δ(18)O+10.1; R(2)=0.99) situated between the Mediterranean MWL and Global MWL. Spring and river water isotope values vary between-7.1 and-4.1 ‰, and-38 and-25 ‰ for δ(18)O and δ(2)H, respectively, responding to winter snowmelt and evaporation. This work implements stable isotopes and hydro-chemical information of springs and river water to understand hydrological and hydro-geological interrelations in karstic semi-arid areas and helps to improve the current water resources management practices of western Iran.


Subject(s)
Deuterium/analysis , Natural Springs/chemistry , Oxygen Isotopes/analysis , Rain/chemistry , Rivers/chemistry , Hydrology , Iran
20.
Crit Rev Oncol Hematol ; 89(2): 314-21, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24035584

ABSTRACT

The endothelins and their associated receptors are important controllers of vascular growth, inflammation and vascular tone. In cancer, they have roles in the control of numerous factors in cancer development and progression, including angiogenesis, stromal reaction, epithelial mesenchymal transitions, apoptosis, invasion, metastases and drug resistance. Also, we consider current information on the role of this signalling system in cancer and examine the state of the current cell, animal and clinical trials utilizing endothelin targeted drugs for cancer management. Although targeting the endothelin axis in cell lines and xenografts show some promise in retarding cellular growth, results from limited clinical trials in prostatic cancer are less encouraging and did not offer significant survival benefit. The ability to target both cancer cells and vasculature via endothelin is an important consideration that necessitates the further refining of therapeutic strategies as we continue to explore the possibilities of the endothelin axis in cancer treatment.


Subject(s)
Antineoplastic Agents/pharmacology , Endothelins/metabolism , Molecular Targeted Therapy/methods , Neoplasms/blood supply , Neoplasms/drug therapy , Animals , Antineoplastic Agents/therapeutic use , Clinical Trials as Topic , Humans , Neoplasms/metabolism , Neoplasms/pathology , Neovascularization, Pathologic/drug therapy , Neovascularization, Pathologic/metabolism , Neovascularization, Pathologic/pathology
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