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1.
Sci Rep ; 14(1): 10003, 2024 05 01.
Article in English | MEDLINE | ID: mdl-38693192

ABSTRACT

Zika, a viral disease transmitted to humans by Aedes mosquitoes, emerged in the Americas in 2015, causing large-scale epidemics. Colombia alone reported over 72,000 Zika cases between 2015 and 2016. Using national surveillance data from 1121 municipalities over 70 weeks, we identified sociodemographic and environmental factors associated with Zika's emergence, re-emergence, persistence, and transmission intensity in Colombia. We fitted a zero-state Markov-switching model under the Bayesian framework, assuming Zika switched between periods of presence and absence according to spatially and temporally varying probabilities of emergence/re-emergence (from absence to presence) and persistence (from presence to presence). These probabilities were assumed to follow a series of mixed multiple logistic regressions. When Zika was present, assuming that the cases follow a negative binomial distribution, we estimated the transmission intensity rate. Our results indicate that Zika emerged/re-emerged sooner and that transmission was intensified in municipalities that were more densely populated, at lower altitudes and/or with less vegetation cover. Warmer temperatures and less weekly-accumulated rain were also associated with Zika emergence. Zika cases persisted for longer in more densely populated areas with more cases reported in the previous week. Overall, population density, elevation, and temperature were identified as the main contributors to the first Zika epidemic in Colombia. We also estimated the probability of Zika presence by municipality and week, and the results suggest that the disease circulated undetected by the surveillance system on many occasions. Our results offer insights into priority areas for public health interventions against emerging and re-emerging Aedes-borne diseases.


Subject(s)
Aedes , Markov Chains , Zika Virus Infection , Zika Virus , Zika Virus Infection/transmission , Zika Virus Infection/epidemiology , Colombia/epidemiology , Humans , Animals , Aedes/virology , Bayes Theorem , Mosquito Vectors/virology , Disease Outbreaks
2.
World Dev ; 167: 106253, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37767357

ABSTRACT

Background: Identifying urban deprived areas, including slums, can facilitate more targeted planning and development policies in cities to reduce socio-economic and health inequities, but methods to identify them are often ad-hoc, resource intensive, and cannot keep pace with rapidly urbanizing communities. Objectives: We apply a spatial modelling approach to identify census enumeration areas (EAs) in the Greater Accra Metropolitan Area (GAMA) of Ghana with a high probability of being a deprived area using publicly available census and remote sensing data. Methods: We obtained United Nations (UN) supported field mapping data that identified deprived "slum" areas in Accra's urban core, data on housing and population conditions from the most recent census, and remotely sensed data on environmental conditions in the GAMA. We first fitted a Bayesian logistic regression model on the data in Accra's urban core (n=2,414 EAs) that estimated the relationship between housing, population, and environmental predictors and being a deprived area according to the UN's deprived area assessment. Using these relationships, we predicted the probability of being a deprived area for each of the 4,615 urban EAs in GAMA. Results: 899 (19%) of the 4,615 urban EAs in GAMA, with an estimated 745,714 residents (22% of its urban population), had a high predicted probability (≥80%) of being a deprived area. These deprived EAs were dispersed across GAMA and relatively heterogeneous in their housing and environmental conditions, but shared some common features including a higher population density, lower elevation and vegetation abundance, and less access to indoor piped water and sanitation. Conclusion: Our approach using ubiquitously available administrative and satellite data can be used to identify deprived neighbourhoods where interventions are warranted to improve living conditions, and track progress in achieving the Sustainable Development Goals aiming to reduce the population living in unsafe or vulnerable human settlements.

3.
Infect Dis Model ; 8(4): 947-963, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37608881

ABSTRACT

For many infectious disease outbreaks, the at-risk population changes their behavior in response to the outbreak severity, causing the transmission dynamics to change in real-time. Behavioral change is often ignored in epidemic modeling efforts, making these models less useful than they could be. We address this by introducing a novel class of data-driven epidemic models which characterize and accurately estimate behavioral change. Our proposed model allows time-varying transmission to be captured by the level of "alarm" in the population, with alarm specified as a function of the past epidemic trajectory. We investigate the estimability of the population alarm across a wide range of scenarios, applying both parametric functions and non-parametric functions using splines and Gaussian processes. The model is set in the data-augmented Bayesian framework to allow estimation on partially observed epidemic data. The benefit and utility of the proposed approach is illustrated through applications to data from real epidemics.

4.
Environ Epidemiol ; 6(5): e226, 2022 Oct.
Article in English | MEDLINE | ID: mdl-36249265

ABSTRACT

Volatile organic compounds (VOCs) are components of the complex mixture of air pollutants within cities and can cause various adverse health effects. Therefore, it is necessary to understand their spatial distribution for exposure assessment in epidemiological studies. Objectives: The objective was to model measured concentrations of five VOCs within the city of Montreal, Canada, developing spatial prediction models that can be used in health studies. Methods: We measured concentrations using 3M 3500 Organic Vapor Monitors, over 2-week periods, for three monitoring campaigns between 2005 and 2006 in over 130 locations in the city. Using GC/MSD (Gas Chromatography/Mass Selective Detector), we measured concentrations of benzene, n-decane, ethylbenzene, hexane, and trimethylbenzene. We fitted four different models that combine land-use regression and geostatistical methods to account for the potential spatial structure that remains after accounting for the land-use variables. The fitted models also accounted for possible variations in the concentration of air pollutants across campaigns. Results: The highest concentrations for all VOCs were found in December with hexane being the most abundant followed by ethylbenzene. We obtained predicted surfaces for the VOCs for the three campaigns and mean surfaces across campaigns. We found higher concentrations of some VOCs along highways and in the Eastern part of Montreal, which is a highly industrialized area. Conclusions: Each of the fitted models captured the spatial and across-campaigns variability for each VOC, and we found that different VOCs required different model structures.

5.
Accid Anal Prev ; 177: 106823, 2022 Nov.
Article in English | MEDLINE | ID: mdl-36115078

ABSTRACT

Crash data observed on a road network often exhibit spatial correlation due to unobserved effects with inherent spatial correlation following the structure of the road network. It is important to model this spatial correlation while accounting for the road network structure. In this study, we introduce the network process convolution (NPC) model. In this model, the spatial correlation among crash data is captured by a Gaussian Process (GP) approximated through a kernel convolution approach. The GP's covariance function is based on path distance computed between a limited set of knots and crash data points on the road network. The proposed model offers a straightforward approach for predicting crash frequency at unobserved locations where covariates are available, and for interpolating the GP values anywhere on the network. Inference procedure is performed following the Bayesian paradigm and is implemented in R-INLA, which offers an estimation procedure that is very efficient compared to Markov Chain Monte Carlo sampling algorithms. We fitted our model to synthetic data and to crash data from Ottawa, Canada. We compared the proposed approach with a proper Conditional Autoregressive (pCAR) model, and with Poisson Regression (PR) and Negative Binomial (NB) models without latent effects. The results of the study indicated that although the pCAR model has comparable fitting performance, the NPC model outperforms pCAR when the main goal is to predict unobserved locations of interest. The proposed model also offers lower mean absolute error rates for cross validated crash counts, latent variable values, fixed-effect coefficients, as well as shorter interval scores for singletons. The NPC provides a natural way to account for the road network structure when considering the inclusion of spatially structured latent random effects in the modelling of crash data. It also offers an improved predictive capability for crash data on a road network.


Subject(s)
Accidents, Traffic , Models, Statistical , Accidents, Traffic/prevention & control , Bayes Theorem , Humans , Markov Chains , Safety
6.
Spat Spatiotemporal Epidemiol ; 42: 100518, 2022 08.
Article in English | MEDLINE | ID: mdl-35934331

ABSTRACT

As of July 2021, Montreal is the epicentre of the COVID-19 pandemic in Canada with highest number of deaths. We aim to investigate the spatial distribution of the number of cases and deaths due to COVID-19 across the boroughs of Montreal. To this end, we propose that the cumulative numbers of cases and deaths in the 33 boroughs of Montreal are modelled through a bivariate hierarchical Bayesian model using Poisson distributions. The Poisson means are decomposed in the log scale as the sums of fixed effects and latent effects. The areal median age, the educational level, and the number of beds in long-term care homes are included in the fixed effects. To explore the correlation between cases and deaths inside and across areas, three different bivariate models are considered for the latent effects, namely an independent one, a conditional autoregressive model, and one that allows for both spatially structured and unstructured sources of variability. As the inclusion of spatial effects change some of the fixed effects, we extend the Spatial+ approach to a Bayesian areal set up to investigate the presence of spatial confounding. We find that the model which includes independent latent effects across boroughs performs the best among the ones considered, there appears to be spatial confounding with the diploma and median age variables, and the correlation between the cases and deaths across and within boroughs is always negative.


Subject(s)
COVID-19 , Bayes Theorem , Canada , Humans , Pandemics , Poisson Distribution
8.
Can J Stat ; 50(3): 713-733, 2022 Sep.
Article in English | MEDLINE | ID: mdl-35941958

ABSTRACT

Forecasting the number of daily COVID-19 cases is critical in the short-term planning of hospital and other public resources. One potentially important piece of information for forecasting COVID-19 cases is mobile device location data that measure the amount of time an individual spends at home. Endemic-epidemic (EE) time series models are recently proposed autoregressive models where the current mean case count is modelled as a weighted average of past case counts multiplied by an autoregressive rate, plus an endemic component. We extend EE models to include a distributed-lag model in order to investigate the association between mobility and the number of reported COVID-19 cases; we additionally include a weekly first-order random walk to capture additional temporal variation. Further, we introduce a shifted negative binomial weighting scheme for the past counts that is more flexible than previously proposed weighting schemes. We perform inference under a Bayesian framework to incorporate parameter uncertainty into model forecasts. We illustrate our methods using data from four US counties.


La prévision du nombre de cas quotidiens de COVID­19 est cruciale pour la planification à court terme de ressources hospitalières et d'autres ressources publiques. Les données de localisation des téléphones mobiles qui mesurent le temps passé à la maison peuvent constituer un élément d'information important pour prédire les cas de COVID­19. Les modèles de séries chronologiques endémiques­épidémiques sont des modèles auto­régressifs récents où le nombre moyen de cas en cours est modélisé comme une moyenne pondérée du nombre de cas antérieurs multipliée par un taux auto­régressif (reproductif), plus une composante endémique. Les auteurs de ce travail généralisent les modèles endémiques­épidémiques pour y inclure un modèle à décalage distribué, et ce, dans le but de tenir compte du lien entre la mobilité et le nombre de cas de COVID­19 enregistrés. Pour saisir les variations de temps supplémentaires, ils y incorporent une marche hebdomadaire aléatoire d'ordre supérieur. De plus, ils proposent un schéma de pondération binomiale négative décalée pour les dénombrements passés, qui est plus flexible que les schémas de pondération existants. Ils utilisent l'inférence bayésienne afin d'intégrer l'incertitude des paramètres aux prédictions du modèle et ils illustrent les méthodes proposées avec des données provenant de quatre comtés américains.

9.
BMC Public Health ; 22(1): 1502, 2022 08 06.
Article in English | MEDLINE | ID: mdl-35932051

ABSTRACT

BACKGROUND: Price discount is an unregulated obesogenic environmental risk factor for the purchasing of unhealthy food, including Sugar Sweetened Beverages (SSB). Sales of price discounted food items are known to increase during the period of discounting. However, the presence and extent of the lagged effect of discounting, a sustained level of sales after discounting ends, is previously unaccounted for. We investigated the presence of the lagged effect of discounting on the sales of five SSB categories, which are soda, fruit juice, sport and energy drink, sugar-sweetened coffee and tea, and sugar-sweetened drinkable yogurt. METHODS: We fitted distributed lag models to weekly volume-standardized sales and percent discounting generated by a supermarket in Montreal, Canada between January 2008 and December 2013, inclusive (n = 311 weeks). RESULTS: While the sales of SSB increased during the period of discounting, there was no evidence of a prominent lagged effect of discounting in four of the five SSB; the exception was sports and energy drinks, where a posterior mean of 28,459 servings (95% credible interval: 2661 to 67,253) of excess sales can be attributed to the lagged effect in the target store during the 6 years study period. CONCLUSION: Our results indicate that studies that do not account for the lagged effect of promotions may not fully capture the effect of price discounting for some food categories.


Subject(s)
Sugar-Sweetened Beverages , Beverages/adverse effects , Carbonated Beverages/adverse effects , Commerce , Consumer Behavior , Humans , Sugars , Supermarkets
10.
Spat Spatiotemporal Epidemiol ; 41: 100495, 2022 06.
Article in English | MEDLINE | ID: mdl-35691652

ABSTRACT

The spatial distribution of surveillance-reported dengue cases and severity are usually analyzed separately, assuming independence between the spatial distribution of non-severe and severe cases. Given the availability of data for the individual geo-location of surveillance-notified dengue cases, we conducted a spatial analysis to model non-severe and severe dengue simultaneously, using a hierarchical Bayesian model. We fit a joint model to the spatial pattern formed by dengue cases as well as to the severity status of the cases. Results showed that age and socioeconomic status were associated with dengue presence, and there was evidence of clustering for overall cases but not for severity. Our findings inform decision making to address the preparedness or implementation of dengue control strategies at the local level.


Subject(s)
Dengue , Severe Dengue , Bayes Theorem , Colombia/epidemiology , Dengue/epidemiology , Dengue/prevention & control , Humans
11.
Stat Methods Med Res ; 31(8): 1590-1602, 2022 08.
Article in English | MEDLINE | ID: mdl-35658776

ABSTRACT

Dengue, Zika, and chikungunya are arboviral diseases (AVD) transmitted mainly by Aedes aegypti. Rio de Janeiro city, Brazil, has been endemic for dengue for over 30 years, and experienced the first joint epidemic of the three diseases between 2015-2016. They present similar symptoms and only a small proportion of cases are laboratory-confirmed. These facts lead to potential misdiagnosis and, consequently, uncertainty in the registration of the cases. We have available the number of cases of each disease for the n=160 neighborhoods of Rio de Janeiro. We propose a Poisson model for the total number of cases of Aedes-borne diseases and, conditioned on the total, we assume a multinomial model for the allocation of the number of cases of each of the diseases across the neighborhoods. This provides simultaneously the estimation of the associations of the relative risk of the total cases of AVD with environmental and socioeconomic variables; and the estimation of the probability of presence of each disease as a function of available covariates. Our findings suggest that a one standard deviation increase in the social development index decreases the relative risk of the total cases of AVD by 28%. Neighborhoods with smaller proportion of green area had greater odds of having chikungunya in comparison to dengue and Zika. A one standard deviation increase in population density decreases the odds of a neighborhood having Zika instead of dengue by 18% but increases the odds of chikungunya in comparison to dengue by 18% and by 43% in comparison to Zika.


Subject(s)
Aedes , Chikungunya Fever , Dengue , Zika Virus Infection , Zika Virus , Animals , Brazil/epidemiology , Chikungunya Fever/epidemiology , Dengue/epidemiology , Disease Outbreaks , Humans , Zika Virus Infection/epidemiology
13.
BMJ Open ; 12(1): e054030, 2022 01 13.
Article in English | MEDLINE | ID: mdl-35027422

ABSTRACT

OBJECTIVE: Countries in sub-Saharan Africa suffer the highest rates of child mortality worldwide. Urban areas tend to have lower mortality than rural areas, but these comparisons likely mask large within-city inequalities. We aimed to estimate rates of under-five mortality (U5M) at the neighbourhood level for Ghana's Greater Accra Metropolitan Area (GAMA) and measure the extent of intraurban inequalities. METHODS: We accessed data on >700 000 women aged 25-49 years living in GAMA using the most recent Ghana census (2010). We summarised counts of child births and deaths by five-year age group of women and neighbourhood (n=406) and applied indirect demographic methods to convert the summaries to yearly probabilities of death before age five years. We fitted a Bayesian spatiotemporal model to the neighbourhood U5M probabilities to obtain estimates for the year 2010 and examined their correlations with indicators of neighbourhood living and socioeconomic conditions. RESULTS: U5M varied almost five-fold across neighbourhoods in GAMA in 2010, ranging from 28 (95% credible interval (CrI) 8 to 63) to 138 (95% CrI 111 to 167) deaths per 1000 live births. U5M was highest in neighbourhoods of the central urban core and industrial areas, with an average of 95 deaths per 1000 live births across these neighbourhoods. Peri-urban neighbourhoods performed better, on average, but rates varied more across neighbourhoods compared with neighbourhoods in the central urban areas. U5M was negatively correlated with multiple indicators of improved living and socioeconomic conditions among peri-urban neighbourhoods. Among urban neighbourhoods, correlations with these factors were weaker or, in some cases, reversed, including with median household consumption and women's schooling. CONCLUSION: Reducing child mortality in high-burden urban neighbourhoods in GAMA, where a substantial portion of the urban population resides, should be prioritised as part of continued efforts to meet the Sustainable Development Goal national target of less than 25 deaths per 1000 live births.


Subject(s)
Child Mortality , Adult , Bayes Theorem , Child , Female , Ghana/epidemiology , Humans , Middle Aged , Socioeconomic Factors , Spatial Analysis , Urban Population
14.
Int J Environ Health Res ; 32(1): 220-231, 2022 Jan.
Article in English | MEDLINE | ID: mdl-32268797

ABSTRACT

Bacillary dysentery (BD) is an acute diarrheal disease prevalent in areas affected by socioeconomic disparities. We investigated BD risk and its associations with socioeconomic factors at the county-level in Jiangsu province, China using epidemiological and socioeconomic data from 2011-2014. We fitted four Bayesian hierarchical models with various prior specifications for random effects. As all model comparison criteria values were similar, we presented results from a reparameterized Besag-York-Mollié model, which addressed issues with the identifiability of variance captured by spatial and independent effects. Our model adjusted for year and socioeconomic status showed 18-65% decreased BD risk compared to 2011. We found a high relative risk in the northwestern and southwestern counties. Increasing the percentage of rural households, rural income per capita, health institutions per capita, or hospital beds per capita decreases the relative risk of BD, respectively. Our findings can be used to improve infectious diarrhea surveillance and enhance existing public health interventions.


Subject(s)
Dysentery, Bacillary , Bayes Theorem , China/epidemiology , Dysentery, Bacillary/epidemiology , Humans , Incidence , Socioeconomic Factors
15.
Environ Res ; 206: 112566, 2022 04 15.
Article in English | MEDLINE | ID: mdl-34922985

ABSTRACT

BACKGROUND: The exacerbation of asthma and respiratory allergies has been associated with exposure to aeroallergens such as pollen. Within an urban area, tree cover, level of urbanization, atmospheric conditions, and the number of source plants can influence spatiotemporal variations in outdoor pollen concentrations. OBJECTIVE: We analyze weekly pollen measurements made between March and October 2018 over 17 sites in Toronto, Canada. The main goals are: to estimate the concentration of different types of pollen across the season; estimate the association, if any, between pollen concentration and environmental variables, and provide a spatiotemporal surface of concentration of different types of pollen across the weeks in the studied period. METHODS: We propose an extension of the land-use regression model to account for the temporal variation of pollen levels and the high number of measurements equal to zero. Inference is performed under the Bayesian framework, and uncertainty of predicted values is naturally obtained through the posterior predictive distribution. RESULTS: Tree pollen was positively associated with commercial areas and tree cover, and negatively associated with grass cover. Both grass and weed pollen were positively associated with industrial areas and TC brightness and negatively associated with the northing coordinate. The total pollen was associated with a combination of these environmental factors. Predicted surfaces of pollen concentration are shown at some sampled weeks for all pollen types. SIGNIFICANCE: The predicted surfaces obtained here can help future epidemiological studies to find possible associations between pollen levels and some health outcome like respiratory allergies at different locations within the study area.


Subject(s)
Allergens , Pollen , Bayes Theorem , Cities , Environmental Monitoring , Poaceae , Seasons
16.
Public Health Nutr ; 24(17): 5616-5628, 2021 12.
Article in English | MEDLINE | ID: mdl-34420529

ABSTRACT

OBJECTIVE: Geographic measurement of diets is generally not available at areas smaller than a national or provincial (state) scale, as existing nutrition surveys cannot achieve sample sizes needed for an acceptable statistical precision for small geographic units such as city subdivisions. DESIGN: Using geocoded Nielsen grocery transaction data collected from supermarket, supercentre and pharmacy chains combined with a gravity model that transforms store-level sales into area-level purchasing, we developed small-area public health indicators of food purchasing for neighbourhood districts. We generated the area-level indicators measuring per-resident purchasing quantity for soda, diet soda, flavoured (sugar-added) yogurt and plain yogurt purchasing. We then provided an illustrative public health application of these indicators as covariates for an ecological spatial regression model to estimate spatially correlated small-area risk of type 2 diabetes mellitus (T2D) obtained from the public health administrative data. SETTING: Greater Montreal, Canada in 2012. PARTICIPANTS: Neighbourhood districts (n 193). RESULTS: The indicator of flavoured yogurt had a positive association with neighbourhood-level risk of T2D (1·08, 95 % credible interval (CI) 1·02, 1·14), while that of plain yogurt had a negative association (0·93, 95 % CI 0·89, 0·96). The indicator of soda had an inconclusive association, and that of diet soda was excluded due to collinearity with soda. The addition of the indicators also improved model fit of the T2D spatial regression (Watanabe-Akaike information criterion = 1765 with the indicators, 1772 without). CONCLUSION: Store-level grocery sales data can be used to reveal micro-scale geographic disparities and trends of food selections that would be masked by traditional survey-based estimation.


Subject(s)
Diabetes Mellitus, Type 2 , Canada , Commerce , Consumer Behavior , Electronics , Food Preferences , Humans
17.
PLoS Negl Trop Dis ; 15(6): e0009537, 2021 06.
Article in English | MEDLINE | ID: mdl-34143771

ABSTRACT

Three key elements are the drivers of Aedes-borne disease: mosquito infestation, virus circulating, and susceptible human population. However, information on these aspects is not easily available in low- and middle-income countries. We analysed data on factors that influence one or more of those elements to study the first chikungunya epidemic in Rio de Janeiro city in 2016. Using spatio-temporal models, under the Bayesian framework, we estimated the association of those factors with chikungunya reported cases by neighbourhood and week. To estimate the minimum temperature effect in a non-linear fashion, we used a transfer function considering an instantaneous effect and propagation of a proportion of such effect to future times. The sociodevelopment index and the proportion of green areas (areas with agriculture, swamps and shoals, tree and shrub cover, and woody-grass cover) were included in the model with time-varying coefficients, allowing us to explore how their associations with the number of cases change throughout the epidemic. There were 13627 chikungunya cases in the study period. The sociodevelopment index presented the strongest association, inversely related to the risk of cases. Such association was more pronounced in the first weeks, indicating that socioeconomically vulnerable neighbourhoods were affected first and hardest by the epidemic. The proportion of green areas effect was null for most weeks. The temperature was directly associated with the risk of chikungunya for most neighbourhoods, with different decaying patterns. The temperature effect persisted longer where the epidemic was concentrated. In such locations, interventions should be designed to be continuous and to work in the long term. We observed that the role of the covariates changes over time. Therefore, time-varying coefficients should be widely incorporated when modelling Aedes-borne diseases. Our model contributed to the understanding of the spatio-temporal dynamics of an urban Aedes-borne disease introduction in a tropical metropolitan city.


Subject(s)
Chikungunya Fever/epidemiology , Social Class , Temperature , Aedes , Animals , Brazil/epidemiology , Chikungunya virus , Cities/epidemiology , Disease Outbreaks , Ecosystem , Humans , Mosquito Vectors , Spatio-Temporal Analysis
18.
PLoS One ; 16(4): e0249836, 2021.
Article in English | MEDLINE | ID: mdl-33872319

ABSTRACT

BACKGROUND: HIV-HCV coinfected individuals are often more deprived than the general population. However, deprivation is difficult to measure, often relying on aggregate data which does not capture individual heterogeneity. We developed an individual-level deprivation index for HIV-HCV co-infected persons that encapsulated social, material, and lifestyle factors. METHODS: We estimated an individual-level deprivation index with data from the Canadian Coinfection Cohort, a national prospective cohort study. We used a predetermined process to select 9 out of 19 dichotomous variables at baseline visit to include in the deprivation model: income >$1500/month; education >high school; employment; identifying as gay or bisexual; Indigenous status; injection drug use in last 6 months; injection drug use ever; past incarceration, and past psychiatric hospitalization. We fitted an item response theory model with: severity parameters (how likely an item was reported), discriminatory parameters, (how well a variable distinguished index levels), and an individual parameter (the index). We considered two models: a simple one with no provincial variation and a hierarchical model by province. The Widely Applicable Information Criterion (WAIC) was used to compare the fitted models. To showcase a potential utility of the proposed index, we evaluated with logistic regression the association of the index with non-attendance to a second clinic visit (as a proxy for disengagement) and using WAIC compared it to a model containing all the individual parameters that compose the index as covariates. RESULTS: We analyzed 1547 complete cases of 1842 enrolled participants. According to the WAIC the hierarchical model provided a better fit when compared to the model that does not consider the individual's province. Values of the index were similarly distributed across the provinces. Overall, past incarceration, education, and unemployment had the highest discriminatory parameters. However, in each province different components of the index were associated with being deprived reflecting local epidemiology. For example, Saskatchewan had the highest severity parameter for Indigenous status while Quebec the lowest. For the secondary analysis, 457 (30%) failed to attend a second visit. A one-unit increase in the index was associated with 17% increased odds (95% credible interval, 2% to 34%) of not attending a second visit. The model with just the index performed better than the model with all the components as covariates in terms of WAIC. CONCLUSION: We estimated an individual-level deprivation index in the Canadian Coinfection cohort. The index identified deprivation profiles across different provinces. This index and the methodology used may be useful in studying health and treatment outcomes that are influenced by social disparities in co-infected Canadians. The methodological approach described can be used in other studies with similar characteristics.


Subject(s)
Coinfection/psychology , HIV Infections/psychology , Hepatitis C/psychology , Psychosocial Deprivation , Canada , Coinfection/epidemiology , Female , HIV Infections/complications , HIV Infections/epidemiology , Hepatitis C/complications , Hepatitis C/epidemiology , Humans , Life Style , Male , Middle Aged , Socioeconomic Factors
19.
Can J Public Health ; 112(4): 638-646, 2021 08.
Article in English | MEDLINE | ID: mdl-33725331

ABSTRACT

OBJECTIVES: Global consumption of caffeinated energy drinks (CED) has been increasing dramatically despite increasing evidence of their adverse health effects. Temporary price discounting is a rarely investigated but potentially powerful food marketing tactic influencing purchasing of CED. Using grocery transaction records generated by food stores in Montreal, we investigated the association between price discounting and purchasing of CED across socio-economic status operationalized by education and income levels in store neighbourhood. METHODS: The outcome, log-transformed weekly store-level sales of CED, was modelled as a function of store-level percent price discounting, store- and neighbourhood-level confounders, and an interaction term between discounting and each of tertile education and income in store neighbourhood. The model was separately fit to transactions from supermarkets, pharmacies, supercentres, and convenience stores. RESULTS: There were 18,743, 12,437, 3965, and 49,533 weeks of CED sales from supermarkets, pharmacies, supercentres, and convenience stores, respectively. Percent price discounting was positively associated with log sales of CED for all store types, and the interaction between education and discounting was prominent in supercentres: -0.039 [95% confidence interval (CI): -0.051, -0.028] and -0.039 [95% CI: -0.057, -0.021], for middle- and high-education neighbourhoods relative to low-education neighbourhoods, respectively. Relative to low-income areas, the associations of discounting and log CED sales in supercentres for neighbourhoods with middle- and high-income tertile were 0.022 [95% CI: 0.010, 0.033] and 0.015 (95% CI: -0.001, 0.031), respectively. CONCLUSION: Price discounting is an important driver of CED consumption and has a varying impact across community education and income.


RéSUMé: OBJECTIFS: La consommation de boissons énergisantes contenant de la caféine (BEC) a augmenté malgré leurs effets néfastes sur la santé. L'escompte sur les prix fait rarement l'objet d'une étude, mais serait potentiellement une puissante tactique de marketing encourageant l'achat de BEC. À l'aide des registres de transactions d'épiceries montréalaises, nous avons étudié la corrélation entre les rabais et les ventes de BEC selon la situation socio-économique − scolarité et revenu − du quartier. MéTHODES: Les ventes hebdomadaires de BEC en magasins ont régressé en fonction du pourcentage de remise, des facteurs de confusion et d'une interaction entre la remise et le niveau de scolarité et revenu d'un quartier, séparément des transactions des grandes surfaces, pharmacies, supermarchés et dépanneurs. RéSULTATS: Il y a eu 18 743, 12 437, 3 965 et 49 533 semaines de vente BEC dans les grandes surfaces, pharmacies, supermarchés et dépanneurs. Le pourcentage d'actualisation était positivement associé aux ventes de BEC. L'interaction avec l'éducation au tercile était importante dans les supercentres : −0,039 [intervalle de confiance (IC) à 95% : −0,051, −0,028] et −0,039 [IC à 95% : −0,057, −0,021], pour les quartiers au niveau d'éducation moyenne et élevée par rapport aux quartiers au niveau d'éducation faible, respectivement. L'interaction avec le revenu dans les supercentres était de 0,022 [IC à 95% : 0,010, 0,033] et de 0,015 (IC à 95% : −0,001, 0,031) pour le quartier avec tertile à revenu moyen et élevé, respectivement. CONCLUSION: L'actualisation augmente les achats de BEC avec un impact variable selon l'éducation et le revenu d'une communauté.


Subject(s)
Commerce , Consumer Behavior , Energy Drinks , Commerce/economics , Commerce/statistics & numerical data , Consumer Behavior/economics , Consumer Behavior/statistics & numerical data , Energy Drinks/economics , Energy Drinks/statistics & numerical data , Humans , Risk Factors
20.
J Pediatr Psychol ; 46(2): 144-152, 2021 02 19.
Article in English | MEDLINE | ID: mdl-33496725

ABSTRACT

The COVID-19 pandemic has impacted the lives and workplaces of individuals across the world substantially, in ways that are yet largely unknown. This commentary aims to provide an early snapshot of the experiences of pediatric postdoctoral fellows in academic medical settings; specifically, we will explore the impact of the pandemic on developing mastery within several competencies (e.g., research, professional development, clinical, interdisciplinary). These competencies are critical elements to fellowship to prepare for independent practice. Several models of training competencies for professional psychology and pediatric psychology exist, which focus on trainee skill development. Measures taken to minimize the spread of COVID-19 have directly impacted hospital systems and training, requiring programs to adapt competencies in various domains, such as increased familiarity with telehealth and virtual supervision. Additionally, fellows experienced an impact of the pandemic on securing employment following fellowship, conducting research and program development activities, and on cognitive flexibility and self-care. Governing bodies, such as the APA and Council of Chairs of Training Councils, have released statements and guidelines on addressing training of postdoctoral fellows including increasing flexibility of training methods, limiting in-person contact, and adjusting educational and licensing requirements. This paper offers informed commentary and diverse perspectives from current postdoctoral fellows engaged in a variety of clinical and research responsibilities regarding how the COVID-19 pandemic has impacted their training. We hope this paper will provide important insight into the unique experiences of postdoctoral fellows during the capstone year(s) of training prior to independent work and inform recommendations for postdoctoral training programs.


Subject(s)
COVID-19 , Pandemics , Pediatrics , Fellowships and Scholarships , Humans , Pediatrics/education , Research Personnel , SARS-CoV-2
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