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1.
Mol Biol Rep ; 49(8): 7327-7336, 2022 Aug.
Article in English | MEDLINE | ID: mdl-35596052

ABSTRACT

BACKGROUND: Zebrafish (Danio rerio), a small freshwater fish that originates from India, Bangladesh, Nepal, Bhutan and northern Myanmar, have been widely used as a model organism for studies of developmental biology and genetics. The current study aimed to determine the origin of South African pet shop stock that are currently being used to establish a laboratory population founded from diverse sources available locally. METHODS AND RESULTS: Zebrafish DNA was extracted from 65 specimens housed at the University of the Free State (UFS) Department of Genetics. For phylogenetic analysis, cytb sequences were generated from all samples. A further 178 sequences were downloaded from the GenBank database, including sequences of an outgroup species (Danio kyathit). Five microsatellite markers were used to further assess the genetic diversity of the UFS zebrafish specimens. A maximum likelihood analysis was performed for the cytb data. Results of the phylogenetic analyses divided the sequences into three major genetic groups, which was congruent with a previous study on laboratory zebrafish provenance. The SA pet shop fish grouped with the lines from the northern and north-eastern regions of India. High levels of microsatellite genetic diversity were observed for the pet shop sourced population, correlating to what has previously been observed in zebrafish. CONCLUSION: These results can be used to guide the future development of laboratory lines suited to the needs at the UFS.


Subject(s)
Cyprinidae , Zebrafish , Animals , Cyprinidae/genetics , Microsatellite Repeats/genetics , Phylogeny , South Africa , Zebrafish/genetics
3.
Stud Health Technol Inform ; 143: 507-12, 2009.
Article in English | MEDLINE | ID: mdl-19380984

ABSTRACT

Electronic Health Record (EHR)systems rely on standard terminologies and classification systems that require both Information Technology (IT) and Information Management (IM) skills. Convergence of perspectives is necessary for effective terminology asset management including evaluation for use, maintenance and intersection with software applications. Multiple terminologies are necessary for patient care communication and data capture within EHRs and other information management tasks. Terminology asset management encompasses workflow and operational context as well as IT specifications and software application run time requirements. This paper identifies the tasks, skills and collaboration of IM and IT approaches for terminology asset management.


Subject(s)
Medical Records Systems, Computerized/standards , Terminology as Topic
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