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1.
Astrobiology ; 22(6): 641-671, 2022 06.
Article in English | MEDLINE | ID: mdl-35447041

ABSTRACT

The chemical composition of aqueous solutions during the Hadean era determined the availability of essential elements for prebiotic synthesis of the molecular building blocks of life. Here we conducted quantitative reaction path modeling of atmosphere-water-rock interactions over a range of environmental conditions to estimate freshwater and evaporite brine compositions. We then evaluated the solution chemistries for their potential to influence ribonucleotide synthesis and polymerization as well as protocell membrane stability. Specifically, solutions formed by komatiite and tonalite (primitive crustal rocks) weathering and evaporation-rehydration (drying-wetting) cycles were studied assuming neutral atmospheric composition over a wide range of values of atmospheric partial pressure of CO2 (PCO2) and temperatures (T). Solution pH decreased and total dissolved concentrations of inorganic P, Mg, Ca, Fe, and C (PT, MgT, CaT, FeT, and CT) increased with increasing PCO2. The PCO2 and T dictated how the solution evolved with regard to minerals precipitated and ions left in solution. At T = 75°C and PCO2 < 0.05 atm, the concentration ratio of magnesium to calcium ion concentrations (Mg2+/Ca2+) was < 1 and predominantly metal aluminosilicates (including clays), dolomite, gibbsite, and pyrite (FeS2) precipitated, whereas at PCO2 > 0.05 atm, Mg2+/Ca2+ was > 1 and mainly magnesite, dolomite, pyrite, chalcedony (SiO2), and kaolinite (Al2Si2O5) precipitated. At T = 75°C and PCO2 > 0.05 atm, hydroxyapatite (HAP) precipitated during weathering but not during evaporation, and so, PT increased with each evaporation-rehydration cycle, while MgT, CaT, and FeT decreased as other minerals precipitated. At T = 75°C and PCO2 ∼5 atm, reactions with komatiite provided end-of-weathering solutions with high enough Mg2+ concentrations to promote RNA-template directed and montmorillonite-promoted nonenzymatic RNA polymerization, but incompatible with protocell membranes; however, montmorillonite-promoted RNA polymerization could proceed with little or no Mg2+ present. Cyclically evaporating/rehydrating brines from komatiite weathering at T = 75°C and PCO2 ∼5 atm yielded the following: (1) high PT values that could promote ribonucleotide synthesis, and (2) low divalent cation concentrations compatible with amino acid-promoted, montmorillonite-catalyzed RNA polymerization and with protocell membranes, but too low for template-directed nonenzymatic RNA polymerization. For all PCO2 values, Mg2+ and PT concentrations decreased, whereas the HCO3- concentration increased within increasing temperature, due to the retrograde solubility of the minerals controlling these ions' concentrations; Fe2+ concentration increased because of prograde pyrite solubility. Tonalite weathering and cyclical wetting-drying reactions did not produce solution compositions favorable for promoting prebiotic RNA formation. Conversely, the ion concentrations compatible with protocell emergence, placed constraints on PCO2 of early Earth's atmosphere. In summary: (1) prebiotic RNA synthesis and membrane self-assembly could have been achieved even under neutral atmosphere conditions by atmosphere-water-komatiite rock interactions; and (2) constraints on element availability for the origins of life and early PCO2 were addressed by a single, globally operating mechanism of atmosphere-water-rock interactions without invoking special microenvironments. The present results support a facile origins-of-life hypothesis even under a neutral atmosphere as long as other favorable geophysical and planetary conditions are also met.


Subject(s)
Bentonite , Carbon Dioxide , Fresh Water , Minerals/chemistry , RNA , Ribonucleotides , Salts , Silicon Dioxide , Water/chemistry
2.
Geohealth ; 5(11): e2021GH000491, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34849441

ABSTRACT

With the Artemis III mission scheduled to land humans on the Moon in 2025, work must be done to understand the hazards lunar dust inhalation would pose to humans. In this study, San Carlos olivine was used as an analog of lunar olivine, a common component of lunar dust. Olivine was dissolved in a flow-through apparatus in both simulated lung fluid and 0.1 M HCl (simulated gastric fluid) over a period of approximately 2 weeks at physiological temperature, 37°C. Effluent samples were collected periodically and analyzed for pH, iron, silicon, and magnesium ion concentrations. The dissolution rate data derived from our measurements allow us to estimate that an inhaled 1.0 µm diameter olivine particle would take approximately 24 years to dissolve in the human lungs and approximately 3 weeks to dissolve in gastric fluid. Results revealed that inhaled olivine particles may generate the toxic chemical, hydroxyl radical, for up to 5-6 days in lung fluid. Olivine dissolved in 0.1 M HCl for 2 weeks transformed to an amorphous silica-rich solid plus the ferric iron oxy-hydroxide ferrihydrite. Olivine dissolved in simulated lung fluid shows no detectable change in composition or crystallinity. Equilibrium thermodynamic models indicate that olivine in the human lungs can precipitate secondary minerals with fibrous crystal structures that have the potential to induce detrimental health effects similar to asbestos exposure. Our work indicates that inhaled lunar dust containing olivine can settle in the human lungs for years and could induce long-term potential health effects like that of silicosis.

3.
Astrobiology ; 20(1): 157-160, 2020 01.
Article in English | MEDLINE | ID: mdl-31880474

ABSTRACT

Discrepancies have been noted in the solubility constant values of calcium phosphate minerals between various databases employed in widely used aqueous speciation calculation software programs. This can cause serious errors in the calculated speciation of waters when using these software programs. The aim of this communication was to bring to light these discrepancies. Experimental determinations of the hydroxyapatite (HAP) solubility product vary by as much as 10 orders of magnitude as a result of experimental challenges related to the presence of impurities in the HAP used, incongruent dissolution, and the contamination of solutions with dissolved carbon dioxide. It is suggested that the value used in the database Thermo.dat is consistent with experimental data devoid of common experimental problems, whereas other common databases use values that lead to a vastly overestimated solubility of HAP.


Subject(s)
Databases as Topic , Durapatite/chemistry , Calcium/analysis , Ions , Solubility , Thermodynamics
4.
Geohealth ; 3(1): 28-42, 2019 Jan.
Article in English | MEDLINE | ID: mdl-32159020

ABSTRACT

Mineral analogs to silicate phases common to planetary regolith, including olivine; the pyroxenes augite and diopside; the plagioclase feldspars labradorite, bytownite, and albite; the Johnson Space Center-1A lunar regolith simulant; as well as quartz (used as a reference), were subjected to mechanical pulverization by laboratory milling for times ranging from 5 to 45 min. Pulverized minerals were then incubated in an aqueous solution containing the free radical spin trapping compound 5,5-Dimethyl-1-Pyrroline-N-Oxide for times ranging from 5 to 30 min. These slurries were then analyzed by Electron Paramagnetic Resonance spectroscopy to quantify the amount of hydroxyl radical (the neutral charge form of the hydroxide ion, denoted as OH*) formed in solution. We find that all tested materials generate an Electron Paramagnetic Resonance spectrum indicating the formation of OH* with concentrations ranging between 0.1 and 1.5 µM. We also find that, in general, mineral pulverization time is inversely correlated to OH* generation, while OH* generation is positively correlated to mineral fluid incubation time for phases that have iron in their nominal chemical formulae, suggesting the possible action of Fenton reaction as a cofactor in increasing the reactivity of these phases. Our results add to a body of literature that indicates that the finely comminuted minerals and rocks present in planetary regolith are capable of generating highly reactive and highly oxidizing radical species in solution. The results provide the foundation for further in vitro and in vivo toxicological studies to evaluate the possible health risks that future explorers visiting the surfaces of planetary bodies may face from these reactive regolith materials.

5.
Geohealth ; 1(5): 237-246, 2017 Jul.
Article in English | MEDLINE | ID: mdl-29085918

ABSTRACT

United States soldiers are returning from the Greater Middle East with respiratory illnesses ranging from new onset asthma to constrictive bronchiolitis. The etiology of the diseases is unknown. A study was conducted to determine the possible role of local mineral dust in the development of abnormal respiratory illnesses in soldiers during and after deployment in Iraq. A dust sample obtained in proximity to a burn pit in Camp Victory, Iraq, (CVD) was characterized both chemically and mineralogically. For comparison, a dust sample from Fort Irwin, California, (FID) was also collected. The ability of the dust samples to generate reactive oxygen species (ROS) was quantified, as well as their ability to generate an inflammatory stress response (ISR) in human lung epithelial cells. Both samples are comprised of common silicate and carbonate minerals and contain heavy metals with concentration ranges expected for mineral dust. The ISR generated by each sample was within the range of inert material with the minimal stress generated associated with the carbonate phases. The findings based on this one sample suggest that the origin of the disease is not driven by the particles ability to generate ROS. However it is likely that particle overload, and associated complications, or endotoxin contribute extensively to pathogenesis.

6.
Nanoscale ; 8(44): 18616-18620, 2016 Nov 10.
Article in English | MEDLINE | ID: mdl-27786331

ABSTRACT

Oxidation of silicon nanoclusters depending on the temperature and oxygen pressure is explored from first principles using the evolutionary algorithm, and structural and thermodynamic analysis. From our calculations of 90 SinOm clusters we found that under normal conditions oxidation does not stop at the stoichiometric SiO2 composition, as it does in bulk silicon, but goes further placing extra oxygen atoms on the cluster surface. These extra atoms are responsible for light emission, relevant to reactive oxygen species and many of them are magnetic. We argue that the super-oxidation effect is size-independent and discuss its relevance to nanotechnology and miscellaneous applications, including biomedical ones.

7.
Environ Sci Technol ; 49(13): 7701-8, 2015 Jul 07.
Article in English | MEDLINE | ID: mdl-26018867

ABSTRACT

The effect of phospholipid on the biogeochemistry of pyrite oxidation, which leads to acid mine drainage (AMD) chemistry in the environment, was investigated. Metagenomic analyses were carried out to understand how the microbial community structure, which developed during the oxidation of pyrite-containing coal mining overburden/waste rock (OWR), was affected by the presence of adsorbed phospholipid. Using columns packed with OWR (with and without lipid adsorption), the release of sulfate (SO4(2-)) and soluble iron (FeTot) was investigated. Exposure of lipid-free OWR to flowing pH-neutral water resulted in an acidic effluent with a pH range of 2-4.5 over a 3-year period. The average concentration of FeTot and SO4(2-) in the effluent was ≥20 and ≥30 mg/L, respectively. In contrast, in packed-column experiments where OWR was first treated with phospholipid, the effluent pH remained at ∼6.5 and the average concentrations of FeTot and SO4(2-) were ≤2 and l.6 mg/L, respectively. 16S rDNA metagenomic pyrosequencing analysis of the microbial communities associated with OWR samples revealed the development of AMD-like communities dominated by acidophilic sulfide-oxidizing bacteria on untreated OWR samples, but not on refuse pretreated with phospholipid.


Subject(s)
Acids/chemistry , Iron/chemistry , Microbiota , Mining , Phospholipids/chemistry , Sulfides/chemistry , Waste Disposal, Fluid , Bacteria/metabolism , Biodegradation, Environmental , Geologic Sediments/chemistry , Hydrogen-Ion Concentration , Metagenomics , Oxidation-Reduction , Phylogeny , Sulfates/analysis , X-Ray Diffraction
8.
J Water Health ; 13(1): 42-53, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25719464

ABSTRACT

We present proof-of-concept results for the elimination of waterborne bacteria by reactive minerals. We exposed Escherichia coli MG1655 suspended in water to the reactive mineral pyrite (FeS2) at room temperature and ambient light. This slurry eliminates 99.9% of bacteria in fewer than 4 hours. We also exposed Escherichia coli to pyrite leachate (supernatant liquid from slurry after 24 hours), which eliminates 99.99% of bacteria over the same time-scale. Unlike SOlar water DISinfection (SODIS), our results do not depend on the presence of ultraviolet (UV) light. We confirmed this by testing proposed SODIS additive and known photo-catalyst anatase (TiO2) for antibacterial properties and found that, in contrast to pyrite, it does not eliminate E. coli under our experimental conditions. Previous investigations of naturally antibiotic minerals have focused on the medical applications of antibiotic clays, and thus have not been conducted under experimental conditions resembling those found in water purification. In our examination of the relevant literature, we have not found previously reported evidence for the use of reactive minerals in water sanitization. The results from this proof-of-concept experiment may have important implications for future directions in household water purification research.


Subject(s)
Anti-Bacterial Agents/pharmacology , Disinfection/methods , Escherichia coli/drug effects , Iron/pharmacology , Sulfides/pharmacology , Water Microbiology , Water Purification/methods , Bacterial Load , Catalase/chemistry , Chelating Agents/chemistry , Edetic Acid/chemistry , Hydrogen Peroxide/chemistry , Hydrogen-Ion Concentration , Titanium/pharmacology , Water Pollutants
9.
Int J Hyg Environ Health ; 218(1): 19-27, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25107347

ABSTRACT

The inhalation of mineral particulates and other earth materials, such as coal, can initiate or enhance disease in humans. Workers in occupations with high particulate exposure, such as mining, are particularly at risk. The ability of a material to generate an inflammatory stress response (ISR), a measure of particle toxicity, is a useful tool in evaluating said exposure risk. ISR is defined as the upregulation of cellular reactive oxygen species (ROS) normalized to cell viability. This study compares the ISR of A549 human lung epithelial cells after exposure to well-characterized common metal-sulfide ore mineral separates. The evaluation of the deleterious nature of ore minerals is based on a range of particle loadings (serial dilutions of 0.002m(2)/mL stock) and exposure periods (beginning at 30min and measured systematically for up to 24h). There is a wide range in ISR values generated by the ore minerals. The ISR values produced by the sphalerite samples are within the range of inert materials. Arsenopyrite generated a small ISR that was largely driven by cell death. Galena showed a similar, but more pronounced response. Copper-bearing ore minerals generated the greatest ISR, both by upregulating cellular ROS and generating substantial and sustained cell death. Chalcopyrite and bornite, both containing ferrous iron, generated the greatest ISR overall. Particles containing Fenton metals as major constituents produce the highest ISR, while other heavy metals mainly generate cell death. This study highlights the importance of evaluating the chemistry, oxidation states and structure of a material when assessing risk management.


Subject(s)
Lung/drug effects , Minerals/toxicity , Occupational Exposure , Particulate Matter/toxicity , Stress, Physiological/drug effects , Sulfides/toxicity , Hydrogen Peroxide , Iron , Lung/pathology , Reactive Oxygen Species , Risk Factors
10.
J Colloid Interface Sci ; 422: 1-8, 2014 May 15.
Article in English | MEDLINE | ID: mdl-24655821

ABSTRACT

The interaction of crystal violet (CV) and six standard reference coals with varying amounts of pyrite was studied using batch sorption experiments. The experiments were designed to test the hypothesis that pyrite-containing coal removes CV through a combination of sorption and a Fenton-like degradation reaction involving pyrite. While pure pyrite does degrade CV slowly through a Fenton-like mechanism, bituminous coals containing pyrite showed far less CV removal than subbituminous coals without pyrite. Hence, the presence of pyrite in coal does not lead to an enhanced removal of CV from solution. Instead, the surface charge of coal appears to exert a primary role on the uptake of CV. The subbituminous coals tested in this study have a negative surface charge between pH 3 and 8, which facilitates the uptake of the cationic dye. Sorption of cationic CV onto subbituminous coal leads to a charge reversal. Modeling of the sorption kinetics suggest that CV diffuses into pore space within the coal after sorbing onto the surface, which is consistent with the fact that CV is not released after uptake by the coal. The results of this study indicate that subbituminous coal might be a useful sorbent for CV contained in waste streams generated in dye processes. Coal is a cheap bulk commodity, CV does not desorb easily, and the resulting CV-containing coal could be burned to incinerate the contaminant while producing energy.

11.
Orig Life Evol Biosph ; 43(4-5): 305-22, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23955667

ABSTRACT

The reaction of nitrite (NO2(-)) and nitrate (NO3(-)) on nanometer-sized FeS particles was investigated in alkaline (initial pH = 10.3) solutions at reaction temperatures of 22, 70, and 120 °C using in situ attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR) and fluorescence spectroscopy that allowed an analysis of adsorbate complexation on the FeS and reaction product in the aqueous phase, respectively. ATR-FTIR showed that NO was a surface-bound intermediate on FeS during its exposure to NO2(-) at all three reaction temperatures. Ammonia/ammonium (NH3/NH4(+)) product was also produced when FeS was exposed to NO2(-) at the 70 °C and 120 °C reaction temperatures. Activation of NO3(-) to form surface-bound NO was experimentally observed to occur at 120 °C on FeS, but not at the lower reaction temperatures. Furthermore, NH3/NH4(+) product in the aqueous phase was only present during the reaction of FeS with NO3(-) at the highest temperature used in this study.


Subject(s)
Ammonia/chemistry , Evolution, Chemical , Ferrous Compounds/chemistry , Nanoparticles/chemistry , Nitrates/chemistry , Nitrites/chemistry , Hydrogen-Ion Concentration , Kinetics , Oxidation-Reduction , Spectrometry, Fluorescence , Spectroscopy, Fourier Transform Infrared , Temperature
12.
Chemosphere ; 93(6): 1216-21, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23895739

ABSTRACT

UNLABELLED: On the basis of a recent epidemiological study it is hypothesized that pyrite content in coal is an important factor in coal workers' pneumoconiosis (CWP) pathogenesis. While the role of pyrite in pathogenesis remains to be resolved, the ability of the mineral to generate reactive oxygen species (ROS) through various mechanisms is likely a contributing factor. The aim of this study was to elucidate the importance of the pyrite content of coal in generating an inflammatory stress response (ISR), which is defined as the upregulation of ROS normalized by cell viability. The ISR of A549 human lung epithelial cells in the presence of natural coal samples with variable pyrite contents was measured. Normalized to surface area, five particle loadings for each coal reference standard were analyzed systematically for a total of 24 h. The ISR generated by coals containing 0.00, 0.01, and 0.49 wt.% pyritic sulfur is comparable to,though less than, the ISR generated by inert glass beads (299% of the control). The coals containing 0.52 and 1.15 wt.% pyritic sulfur generated the greatest ISR (798% and 1426% of the control, respectively). CONCLUSIONS: While ISR does not increase proportionally to pyrite content in coal, the two coals with the highest pyritic sulfur and available iron contents generate the greatest ISR. Therefore, the present study indicates that coals with elevated pyrite contents are likely to induce a significant health burden by stimulating inflammation within the lungs, and may contribute to the development of CWP.


Subject(s)
Air Pollutants, Occupational/toxicity , Iron/toxicity , Pneumoconiosis/etiology , Sulfides/toxicity , Cell Line , Coal Mining , Epithelial Cells , Humans , Lung , Occupational Exposure , Pneumoconiosis/metabolism
13.
Orig Life Evol Biosph ; 42(4): 275-94, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22562476

ABSTRACT

An important constraint on the formation of the building blocks of life in the Hadean is the availability of small, activated compounds such as ammonia (NH(3)) relative to its inert dinitrogen source. Iron-sulfur particles and/or mineral surfaces have been implicated to provide the catalytic active sites for the reduction of dinitrogen. Here we provide a combined kinetic, spectroscopic, and computational modeling study for an alternative source of ammonia from water soluble nitrogen oxide ions. The adsorption of aqueous nitrite (NO(2)(-)) and nitrate (NO(3)(-)) on pyrite (FeS(2)) and subsequent reduction chemistry to ammonia was investigated at 22°C, 70°C, and 120°C. Batch geochemical and in situ Attenuated Total Reflection - Fourier Transform Infrared (ATR-FTIR) spectroscopy experiments were used to determine the reduction kinetics to NH(3) and to elucidate the identity of the surface complexes, respectively, during the reaction chemistry of NO(2)(-) and NO(3)(-). Density functional theory (DFT) calculations aided the interpretation of the vibrational data for a representative set of surface species. Under the experimental conditions used in this study, we detected the adsorption of nitric oxide (NO) intermediate on the pyrite surface. NH(3) production from NO(2)(-) occurred at 70 and 120°C and from NO(3)(-) occurred only at 120°C.


Subject(s)
Iron/chemistry , Nitrates/chemistry , Nitrites/chemistry , Quaternary Ammonium Compounds/chemistry , Sulfides/chemistry , Adsorption , Computational Biology/methods , Computer Simulation , Kinetics , Models, Chemical , Nitric Oxide/chemistry , Oxidation-Reduction , Spectroscopy, Fourier Transform Infrared , Temperature
15.
Environ Geochem Health ; 34(4): 527-38, 2012 Aug.
Article in English | MEDLINE | ID: mdl-21989857

ABSTRACT

The origin of coal worker's pneumoconiosis (CWP) has been long debated. A recent epidemiological study shows a correlation between what is essentially the concentration of pyrite within coal and the prevalence of CWP in miners. Hydrogen peroxide and hydroxyl radical, both reactive oxygen species (ROS), form as byproducts of pyrite oxidative dissolution in air-saturated water. Motivated by the possible importance of ROS in the pathogenesis of CWP, we conducted an experimental study to evaluate if ROS form as byproducts in the oxidative dissolution of pyrite in simulated lung fluid (SLF) under biologically applicable conditions and to determine the persistence of pyrite in SLF. While the rate of pyrite oxidative dissolution in SLF is suppressed by 51% when compared to that in air-saturated water, the initial amount of hydrogen peroxide formed as a byproduct in SLF is nearly doubled. Hydroxyl radical is also formed in the experiments with SLF, but at lower concentrations than in the experiments with water. The formation of these ROS indicates that the reaction mechanism for pyrite oxidative dissolution in SLF is no different from that in water. The elevated hydrogen peroxide concentration in SLF suggests that the decomposition, via the Fenton mechanism to hydroxyl radical or with Fe(III) to form water and molecular oxygen, is initially inhibited by the presence of SLF components. On the basis of the oxidative dissolution rate of pyrite measured in this paper, it is calculated that a respirable two micron pyrite particle will take over 3 years to dissolve completely.


Subject(s)
Anthracosis/metabolism , Body Fluids/metabolism , Coal/toxicity , Iron/metabolism , Lung/metabolism , Reactive Oxygen Species/metabolism , Sulfides/metabolism , Anthracosis/etiology , Body Fluids/chemistry , Coal Mining , Humans , Hydrogen Peroxide/metabolism , Hydroxyl Radical/metabolism , Inhalation Exposure , Lung/chemistry , Occupational Exposure , Oxidation-Reduction , Spectrum Analysis
16.
Environ Sci Technol ; 45(24): 10422-8, 2011 Dec 15.
Article in English | MEDLINE | ID: mdl-22066460

ABSTRACT

Carbon dioxide sequestration via the use of sulfide reductants and mineral carbonation of the iron oxyhydroxide polymorphs lepidocrocite, goethite, and akaganeite with supercritical CO(2) (scCO(2)) was investigated using in situ attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR), X-ray diffraction (XRD), and transmission electron microscopy (TEM). The exposure of the different iron oxyhydroxides to aqueous sulfide in contact with scCO(2) at ∼70-100 °C resulted in the partial transformation of the minerals to siderite (FeCO(3)) and sulfide phases such as pyrite (FeS(2)). The relative yield of siderite to iron sulfide bearing mineral product was a strong function of the initial sulfide concentration. The order of mineral reactivity with regard to the amount of siderite formation in the scCO(2)/sulfide environment for a specific reaction time was goethite < lepidocrocite ≤ akaganeite. Given the presence of goethite in sedimentary formations, this conversion reaction may have relevance to the subsurface sequestration and geologic storage of carbon dioxide.


Subject(s)
Air Pollutants/chemistry , Carbon Dioxide/chemistry , Carbon Sequestration , Ferric Compounds/chemistry , Air Pollutants/analysis , Air Pollution/prevention & control , Carbon Dioxide/analysis , Iron Compounds/chemistry , Microscopy, Electron, Transmission , Minerals/chemistry , Models, Chemical , Spectroscopy, Fourier Transform Infrared , X-Ray Diffraction
17.
Geochem Trans ; 10: 8, 2009 Aug 11.
Article in English | MEDLINE | ID: mdl-19671165

ABSTRACT

BACKGROUND: Given the importance of highly reactive oxygen species (hROS) as reactants in a wide range of biological, photochemical, and environmental systems there is an interest in detection and quantification of these species. The extreme reactivity of the hROS, which includes hydroxyl radicals, presents an analytical challenge. 3'-(p-Aminophenyl) fluorescein (APF) is a relatively new probe used for measuring hROS. Here, we further evaluate the use of APF as a method for the detection of hydroxyl radicals in particle suspensions. RESULTS: Particle-generated hROS can be quantified with an estimated detection limit of 50 nM. Measurements of hROS in two National Institute of Standards and Technology (NIST 2709 and 2710) soil suspensions and a pyrite suspension show non-linear particle dose-response curves for hROS generation. APF can also be used in solutions containing no dissolved molecular oxygen (O2) to determine the role of O2 in the formation of hROS. Results confirm that O2 is mechanistically important in the formation of hROS by dissolved ferrous iron and in pyrite suspensions. CONCLUSION: Given the non-linear dose-response curves for particle generation of hROS, we recommend using several particle loadings in experiments aimed to compare particles for their hROS generation potential. The method presented here is specific to hROS and simple to perform. The analysis can be conducted in mobile labs as only basic laboratory equipment is required.

18.
J Phys Chem A ; 113(6): 1020-5, 2009 Feb 12.
Article in English | MEDLINE | ID: mdl-19146444

ABSTRACT

Nelsen's four-point method of separating oxidants and reductants has been tested to evaluate its applicability to proton-coupled electron-transfer reactions. An efficient computational method was developed to determine rate-limiting steps in complex, multistep redox reactions. Geochemical redox reactions are rarely single-step, and by identifying the rate-limiting steps, computational time can be greatly reduced. The reaction of superoxide and ferrous oxide was selected as a test case for its simplicity and its importance in environmental radical generation chemistry (Fenton's reaction). Two approaches, one quantum mechanical and the other semiempirical, were compared. In both approaches, hybrid density functional theory (DFT) was used with the B3LYP/6-31+G(d,p) basis set and a polarized continuum model of the solvent to minimize the structures and determine the energies. In the quantum mechanical case, DFT was used to determine both the Gibbs free energies and the values for the intrinsic component of the reorganization energy of possible combinations of reactants and products. In the latter, experimental DeltaG(f) values were combined with calculated intrinsic reorganization energy values. The computational results matched the relative difference in rate barriers between the reduction of superoxide by ferrous iron above and below pH 4.8. In the acidic pH range, the proton is coupled to the electron transfer, whereas in the neutral case, the proton initiates the electron transfer.

19.
Geochem Trans ; 9: 5, 2008 May 19.
Article in English | MEDLINE | ID: mdl-18489746

ABSTRACT

Experiments with dinitrogen-, nitrite-, nitrate-containing solutions were conducted without headspace in Ti reactors (200 degrees C), borosilicate septum bottles (70 degrees C) and HDPE tubes (22 degrees C) in the presence of Fe and Ni metal, awaruite (Ni80Fe20) and tetrataenite (Ni50Fe50). In general, metals used in this investigation were more reactive than alloys toward all investigated nitrogen species. Nitrite and nitrate were converted to ammonium more rapidly than dinitrogen, and the reduction process had a strong temperature dependence. We concluded from our experimental observations that Hadean submarine hydrothermal systems could have supplied significant quantities of ammonium for reactions that are generally associated with prebiotic synthesis, especially in localized environments. Several natural meteorites (octahedrites) were found to contain up to 22 ppm Ntot. While the oxidation state of N in the octahedrites was not determined, XPS analysis of metals and alloys used in the study shows that N is likely present as nitride (N3-). This observation may have implications toward the Hadean environment, since, terrestrial (e.g., oceanic) ammonium production may have been supplemented by reduced nitrogen delivered by metal-rich meteorites. This notion is based on the fact that nitrogen dissolves into metallic melts.

20.
Orig Life Evol Biosph ; 38(3): 195-209, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18452061

ABSTRACT

Nitrogen reduction by ferrous iron has been suggested as an important mechanism in the formation of ammonia on pre-biotic Earth. This paper examines the effects of adsorption of ferrous iron onto a goethite (alpha-FeOOH) substrate on the thermodynamic driving force and rate of a ferrous iron-mediated reduction of N2 as compared with the homogeneous aqueous reaction. Utilizing density functional theory and Marcus Theory of proton coupled electron transfer reactions, the following two reactions were studied: Fe2+aq + N2aq + H2Oaq --> N2H* + FeOH2+aq and triple bond Fe2+ads + N2aq + 2H2Oaq --> N2H* + alpha-FeOOHs + 2H+aq. Although the rates of both reactions were calculated to be approximately zero at 298 K, the model results suggest that adsorption alters the thermodynamic driving force for the reaction but has no other effect on the direct electron transfer kinetics. Given that simply altering the thermodynamic driving force will not reduce dinitrogen, we can make mechanistic connections between possible prebiotic pathways and biological N2 reduction. The key to reduction in both cases is N2 adsorption to multiple transition metal centers with competitive H2 production.


Subject(s)
Iron/chemistry , Models, Chemical , Nitrogen/chemistry , Kinetics , Molecular Structure , Oxidation-Reduction
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