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1.
Toxicol Appl Pharmacol ; 176(2): 118-26, 2001 Oct 15.
Article in English | MEDLINE | ID: mdl-11601888

ABSTRACT

Fumonisins are a family of mycotoxins produced by Fusarium moniliforme, which is the most common mold found on corn throughout the world. These compounds are both toxic and carcinogenic for animals, and perhaps humans, with the kidney being the most sensitive organ to fumonisin toxicity. The molecular mechanism of fumonisin toxicity appears to involve disruption of de novo biosynthesis of sphingolipids and accumulation of sphinganine. The goals of this study were to determine whether fumonisin B(1) kills LLC-PK(1) renal kidney epithelial cells by inducing apoptosis and to identify genes affected by sphinganine that mediate fumonisin B(1)-induced cell death. Fumonisin B(1) produced morphological changes (i.e., cell shrinkage, membrane blebbing) and time-dependent increases in DNA fragmentation demonstrating that the toxin induces apoptosis. Simultaneously, fumonisin B(1) blocked sphingolipid biosynthesis and caused accumulation of sphinganine. To further investigate the role of sphinganine in fumonisin B(1)-induced apoptosis, beta-fluoroalanine (betaFA) was used to inhibit serine palmitoyltransferase, which catalyzes an earlier step in the sphingolipid biosynthetic pathway. betaFA blocked sphinganine accumulation and prevented fumonisin B(1)-induced DNA fragmentation, confirming that apoptosis induced by fumonisin B(1) is dependent upon accumulation of sphinganine. To examine gene expression, differential display reverse transcriptase polymerase chain reaction (DDRT-PCR) was applied to RNA isolated after 16 h of exposure to fumonisin B(1). Differential expression in response to fumonisin B(1) of a gene identified as calmodulin has been verified by Northern analysis. Sphinganine appears to mediate the effect because betaFA reduces induction of calmodulin mRNA by fumonisin B(1). Fumonisin B(1) also increases calmodulin protein in a concentration-dependent manner and the calmodulin antagonist W7 blocks fumonisin B(1)-induced DNA fragmentation, supporting a role for calmodulin in fumonisin B(1)-induced apoptosis. In contrast, fumonisin B(1) had no effect on expression of bcl-2 family genes (bax, bcl-2, and bcl-x). These findings demonstrate that fumonisin B(1) kills LLC-PK(1) kidney cells by inducing apoptosis. Further, the results establish a sequence of events for fumonisin B(1)-induced apoptosis involving initial disruption of sphingolipid metabolism and accumulation of sphinganine (or a metabolite), which, in turn, induces expression of calmodulin.


Subject(s)
Alanine/analogs & derivatives , Apoptosis/drug effects , Carboxylic Acids/pharmacology , Epithelial Cells/metabolism , Fumonisins , Kidney/metabolism , Sphingosine/analogs & derivatives , Sphingosine/metabolism , Alanine/pharmacology , Animals , Antimetabolites/pharmacology , Blotting, Western , Calmodulin/metabolism , Carboxylic Acids/antagonists & inhibitors , Cyclin D1/biosynthesis , Cyclin D1/genetics , Densitometry , Epithelial Cells/drug effects , Flow Cytometry , Kidney/cytology , Kidney/drug effects , LLC-PK1 Cells , Proto-Oncogene Proteins/metabolism , Proto-Oncogene Proteins c-bcl-2/metabolism , RNA, Messenger/biosynthesis , RNA, Messenger/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction , Swine , bcl-2-Associated X Protein , bcl-X Protein
2.
Am J Hum Genet ; 68(3): 795-801, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11179028

ABSTRACT

A recent study of hereditary prostate cancer has provided evidence for a prostate cancer-susceptibility locus, HPC20, which maps to 20q13. To assess further the potential contribution of this locus to prostate cancer susceptibility, we studied 172 unrelated families affected by prostate cancer, using 17 polymorphic markers across a 98.5-cM segment of chromosome 20 that contains the candidate region. Parametric analysis, allowing for heterogeneity, resulted in an overall HLOD score of 0.09 (P=.39) at D20S171, under the assumption of linkage in 6% of families. Mode-of-inheritance-free analysis of the entire data set resulted in a maximal Zlr score of 0.76 (LOD 0.13; P=.22) at the same location. The strongest evidence for linkage was seen in the subset of 16 black families (LOD 0.86; Zlr=1.99; P=.023) between markers D20S893 and D20S120, near the putative location of HPC20. Although some positive results were observed, our linkage study does not provide statistically significant support for the existence of a prostate cancer-susceptibility locus HPC20 at 20q13.


Subject(s)
Chromosomes, Human, Pair 20 , Genetic Predisposition to Disease/genetics , Polymorphism, Genetic , Prostatic Neoplasms/genetics , Aged , Black People/genetics , Chromosome Mapping , Genetic Markers , Genotype , Humans , Lod Score , Male , Middle Aged , Prostatic Neoplasms/epidemiology , United States , White People
3.
Hum Mutat ; 16(1): 23-30, 2000.
Article in English | MEDLINE | ID: mdl-10874301

ABSTRACT

LKB1, the human gene encoding a serine threonine kinase, was recently identified as a susceptibility gene for Peutz-Jeghers syndrome (PJS), a disease characterized by the constellation of intestinal hamartomata, oral mucocutaneous hyperpigmentation, and an increased risk for gastrointestinal as well as extraintestinal malignancies. To date, the majority of individuals with PJS have been found to have genetic alterations in LKB1, most of which result in protein truncation. Additionally, linkage analyses have suggested a modicum of genetic heterogeneity, with the majority of PJS families showing linkage to the LKB1 locus. In this study, we evaluated five kindreds with greater than two affected family members, five PJS probands with only one other affected family member, as well as 23 individuals with sporadic PJS for mutations within the LKB1 gene. Conformation sensitive gel electrophoresis was utilized for the initial screen, followed by direct sequence analysis for characterization. Long-range PCR was used for the detection of larger genetic insertions or deletions. Mutation analysis revealed genetic alterations in LKB1 in two probands who had a family history of PJS. LKB1 mutations were detected in only four of the remaining 23 cases of sporadic PJS. These data suggest the presence of significant genetic heterogeneity for PJS and the involvement of other loci in this syndrome.


Subject(s)
Genetic Heterogeneity , Peutz-Jeghers Syndrome/genetics , AMP-Activated Protein Kinase Kinases , DNA Mutational Analysis , DNA Primers/chemistry , Electrophoresis, Agar Gel , Female , Genetic Linkage/genetics , Germ-Line Mutation/genetics , Humans , Male , Neoplasms/genetics , Nucleic Acid Conformation , Pedigree , Polymerase Chain Reaction , Protein Serine-Threonine Kinases/genetics , Sequence Analysis, DNA/methods
4.
Am J Hum Genet ; 67(1): 82-91, 2000 Jul.
Article in English | MEDLINE | ID: mdl-10820130

ABSTRACT

Recent studies suggest that hereditary prostate cancer is a complex disease involving multiple susceptibility genes and variable phenotypic expression. While conducting a genomewide search on 162 North American families with > or =3 members affected with prostate cancer (PRCA), we found evidence for linkage to chromosome 20q13 with two-point parametric LOD scores >1 at multiple sites, with the highest two-point LOD score of 2.69 for marker D20S196. The maximum multipoint NPL score for the entire data set was 3.02 (P=.002) at D20S887. On the basis of findings from previous reports, families were stratified by the presence (n=116) or absence (n=46) of male-to-male transmission, average age of diagnosis (<66 years, n=73; > or =66 years, n=89), and number of affected individuals (<5, n=101; > or =5, n=61) for further analysis. The strongest evidence of linkage was evident with the pedigrees having <5 family members affected with prostate cancer (multipoint NPL 3.22, P=.00079), a later average age of diagnosis (multipoint NPL 3.40, P=.0006), and no male-to-male transmission (multipoint NPL 3.94, P=.00007). The group of patients having all three of these characteristics (n=19) had a multipoint NPL score of 3.69 (P=.0001). These results demonstrate evidence for a PRCA susceptibility locus in a subset of families that is distinct from the groups more likely to be linked to previously identified loci.


Subject(s)
Chromosomes, Human, Pair 20/genetics , Genetic Predisposition to Disease/genetics , Prostatic Neoplasms/genetics , Age of Onset , Aged , Alleles , Chromosome Mapping , Gene Frequency/genetics , Genes, Dominant/genetics , Genes, Recessive/genetics , Genetic Heterogeneity , Genetic Markers/genetics , Humans , Lod Score , Male , Middle Aged , Models, Genetic , Prostatic Neoplasms/epidemiology , Software , Statistics, Nonparametric
5.
Am J Hum Genet ; 66(2): 539-46, 2000 Feb.
Article in English | MEDLINE | ID: mdl-10677314

ABSTRACT

Recent studies suggest that hereditary prostate cancer (PRCA) is a complex disease, involving multiple susceptibility genes and variable phenotypic expression. Through linkage analysis, potential prostate cancer susceptibility loci have been mapped to 3 regions on chromosome 1. To investigate the reported linkage to these regions, we conducted linkage studies on 144 PRCA families by using microsatellite markers in regions 1q24-25 (HPC1) and 1q42.2-43 (PCAP). We also examined the 1p36 (CAPB) region in 13 PRCA families with at least one case of brain cancer. No significant evidence of linkage to the HPC1 or PCAP region was found when the entire data set was analyzed. However, weak evidence for linkage to HPC1 was observed in the subset of families with male-to-male transmission (n=102; maximum multipoint nonparametric linkage [NPL] 1.99, P=.03). Weak evidence for linkage with heterogeneity within this subset was also observed (HLOD 1.21, P=.02), with approximately 20% of families linked. Although not statistically significant, suggestive evidence for linkage to PCAP was observed for the families (n=21) that met the three criteria of male-to-male transmission, average age of diagnosis <66 years, and >/=5 affected individuals (maximum multipoint NPL 1.45, P=.08). There was no evidence for linkage to CAPB in the brain cancer-prostate cancer subset. These results strengthen the argument that prostate cancer is a heterogeneous disease and that multiple genetic and environmental factors may be important for its etiology.


Subject(s)
Chromosome Mapping , Chromosomes, Human, Pair 1/genetics , Lod Score , Microsatellite Repeats/genetics , Prostatic Neoplasms/genetics , Aged , Brain Neoplasms/genetics , Female , Genetic Heterogeneity , Genetic Predisposition to Disease/genetics , Genetic Variation/genetics , Humans , Male , Middle Aged , Models, Genetic , Pedigree
6.
Pediatr Res ; 44(2): 148-53, 1998 Aug.
Article in English | MEDLINE | ID: mdl-9702906

ABSTRACT

After identifying a 10-year-old boy with inherited long QT syndrome (LQTS) after a near-drowning that required defibrillation from torsades de pointes, evaluation of first degree relatives revealed a four-generation kindred comprising 26 individuals with four additional symptomatic and eight asymptomatic members harboring an abnormally prolonged QTc (defined as > or =0.46 s1/2). We set out to determine the molecular basis of their LQTS. The inherited LQTS represents a collection of genetically distinct ion channelopathies with over 40 mutations in four fundamental cardiac ion channels identified. Molecular studies, including linkage analysis and identification of the disease-associated mutation, were performed on genomic DNA isolated from peripheral blood samples from 29 available family members. Genetic linkage analysis excluded the regions for LQT2, LQT3, and LQT5. However, the chromosome 11p15.5 region (LQT1) showed evidence of linkage with a maximum lod score of 3.36. Examination of the KVLQT1 gene revealed a novel 3-bp deletion resulting in an in-frame deltaF339 (phenylalanine) deletion in the proband. This deltaF339 mutation was confirmed in nine additional family members who shared both an assigned affected phenotype and the disease-associated linked haplotype. Importantly, three asymptomatic family members, with a tentative clinical diagnosis based on their QTc, did not have this mutation and could be reclassified as unaffected. It is noteworthy that the proband's ECG suggested the sodium channel-based LQT3 genotype. These findings show the potential importance of establishing a molecular diagnosis rather than initiating genotype-specific interventions based upon inspection of a patient's ECG.


Subject(s)
Chromosomes, Human, Pair 11 , Chromosomes, Human, Pair 3 , Long QT Syndrome/genetics , Near Drowning/complications , Potassium Channels, Voltage-Gated , Potassium Channels/genetics , Female , Genetic Linkage , Haplotypes , Humans , KCNQ Potassium Channels , KCNQ1 Potassium Channel , Male , Mutation , Pedigree , Phenotype , Sequence Analysis, DNA , Torsades de Pointes/etiology
7.
Vet Hum Toxicol ; 39(6): 334-6, 1997 Dec.
Article in English | MEDLINE | ID: mdl-9397500

ABSTRACT

This study was conducted to investigate the effects of dietary Fusarium moniliforme culture material (M-1325) containing known concentrations of fumonisins B1, B2 and B3 on sphingolipids in urine and hair of mink (Mustela vison) for use as potential, non-invasive biomarkers of exposure to fumonisins in this species. Feeding mink diets containing 86, 22, and 7 ppm or 200, 42, and 12 ppm of fumonisins B1, B2 and B3, respectively, yielded marked increases in urinary free sphinganine (Sa) and free sphingosine (So) concentrations, and free Sa/free So ratios (2 to 11-fold) within 7 d, compared to controls. Free Sa and free So concentrations and Sa/So ratios in hair samples from mink fed the control or high dose fumonisin diets for 100 days were similar and were not apparently altered by exposure to these mycotoxins. These results suggest that Sa/So ratios in urine, but not in hair of mink can serve as an early indicator of exposure to fumonisins in this species.


Subject(s)
Carboxylic Acids/toxicity , Fumonisins , Hair/metabolism , Sphingolipids/metabolism , Sphingosine/analogs & derivatives , Sphingosine/metabolism , Animals , Female , Male , Mink
8.
Toxicol Appl Pharmacol ; 142(1): 208-25, 1997 Jan.
Article in English | MEDLINE | ID: mdl-9007051

ABSTRACT

The "sphingosin" backbone of sphingolipids was so named by J. L. W. Thudichum in 1884 for its enigmatic ("Sphinx-like") properties. Although still an elusive class of lipids, research on the involvement of sphingolipids in the signal transduction pathways that mediate cell growth, differentiation, multiple cell functions, and cell death has been rapidly expanding our understanding of these compounds. In addition to the newly discovered role of ceramide as an intracellular second messenger for tumor necrosis factor-alpha, IL-1beta, and other cytokines, sphingosine, sphingosine-1-phosphate, and other sphingolipid metabolites have recently been demonstrated to modulate cellular calcium homeostasis and cell proliferation. Perturbation of sphingolipid metabolism using synthetic and naturally occurring inhibitors of key enzymes of the biosynthetic pathways is aiding the characterization of these processes; for examples, inhibition of cerebroside synthase has indicated a role for ceramide in cellular stress responses including heat shock, and inhibition of ceramide synthase (by fumonisins) has revealed the role of disruption of sphingolipid metabolism in several animal diseases. Fumonisins are currently the focus of a FDA long-term tumor study. This review summarizes recent research on (i) the role of sphingolipids as important components of the diet, (ii) the role of sphingoid base metabolites and the ceramide cycle in expression of genes regulating cell growth, differentiation, and apoptosis, (iii) the use of cerebroside synthase inhibitors as tools for understanding the role of sphingolipids as mediators of cell cycle progression, renal disease, and stress responses, and (iv) the involvement of disrupted sphingolipid metabolism in animal disease and cellular deregulation associated with exposure to inhibitors of ceramide synthase and serine palmitoyltransferase, key enzymes in de novo sphingolipid biosynthesis. These findings illustrate how an understanding of the function of sphingolipids can help solve questions in toxicology and this is undoubtedly only the beginning of this story.


Subject(s)
Sphingolipids/physiology , Amidohydrolases/antagonists & inhibitors , Animal Feed , Animals , Calcium/metabolism , Carboxylic Acids/toxicity , Cell Cycle , Cell Division , Ceramidases , Ceramides/physiology , Dietary Fats , Enzyme Inhibitors/pharmacology , Food Contamination , Gene Expression Regulation/physiology , Growth Substances/physiology , Homeostasis , Humans , Mammals/metabolism , Membrane Lipids/chemistry , Membrane Lipids/physiology , Models, Biological , Morpholines/pharmacology , Mycotoxins/toxicity , Second Messenger Systems , Sphingolipids/chemistry , Stress, Physiological/metabolism
9.
Oncogene ; 13(10): 2159-66, 1996 Nov 21.
Article in English | MEDLINE | ID: mdl-8950983

ABSTRACT

Comparison of acquired mutations in the p53 tumor suppressor gene can illuminate factors contributing to carcinogenesis among cancer cohorts. Japan has an ethnically homogeneous population with a low incidence of breast cancer. Previously we reported an unusual frequency, allelic status, and clustering of mutations in breast cancers from the northern part of the main Japanese island. To extend these findings, exons 2-11 and adjacent intronic sequences were analysed in tumors of women from northern (Hokkaido) and southern (Tokushima) Japan. The frequency of breast cancers with p53 gene mutations in the Hokkaido group is the highest reported (81%) while that in Tokushima (28%) is similar to most other populations. Thirteen of the 19 mutations (68.4%) in the Hokkaido cohort were heterozygous, an unusually high frequency for p53 mutations in any tumor type. There were three missense mutations at codon 175, a known hotspot for alterations in the p53 gene, and three missense mutations at codon 179, a rare site for p53 changes. In addition, the patterns of p53 gene mutation differed between the two Japanese cohorts (P=0.04). The multiple differences in acquired p53 mutations suggest unsuspected biological differences among breast cancers in northern and southern Japan. In addition, the high frequency of p53 mutations in breast cancers from Hokkaido predicted a poorer prognosis for this population which was confirmed on examination of mortality data.


Subject(s)
Breast Neoplasms/genetics , Genes, p53/genetics , Point Mutation/genetics , Adult , Aged , Breast Neoplasms/epidemiology , Breast Neoplasms/ethnology , Cohort Studies , Female , Humans , Japan/epidemiology , Japan/ethnology , Middle Aged , Space-Time Clustering , Topography, Medical
10.
Br J Cancer ; 73(8): 896-901, 1996 Apr.
Article in English | MEDLINE | ID: mdl-8611423

ABSTRACT

The pattern of acquired mutations in the p53 tumour-suppressor gene is potentially useful for determining factors contributing to carcinogenesis in diverse populations differing in incidence and/or mortality from the disease. We previously reported differences in mutational patterns of the p53 gene in primary breast cancers from Midwest US Caucasian, African-American and Austrian women. Herein, we report 16 mutations in 27 primary breast cancers from Japanese women from Hirosaki, a population with a low incidence of breast cancer. The frequency of 59.3% of p53 mutations is the highest reported in breast cancers from a particular ethnic group thus far. A relatively high number of mutations (7/16) were heterozygous in at least some tumour cell clusters. Intergroup comparisons of the mutational pattern between this population and several other US, European and Japanese populations do not show any statistically significant differences. There were recurrent mutations at two sites, codon 273 (R --> H; three mutations), a common hotspot of mutations in breast and other cancers, and codon 183 (S --> Stop; two mutations), a very rare location for p53 mutations. These mutations were shown to be independent and presumably not in the germ line. The highest frequency of p53 mutations raises the possibility that p53 mutagenesis is a predominant factor for breast cancer development in this low-risk Japanese group, whereas in other cohorts different mechanisms are likely to account for the higher proportion of breast cancer. Further studies are needed to confirm the present observations.


Subject(s)
Breast Neoplasms/genetics , Genes, p53 , Mutation , Adult , Aged , Aged, 80 and over , Alleles , Breast Neoplasms/chemistry , Female , Humans , Immunohistochemistry , Middle Aged , Tumor Suppressor Protein p53/analysis
11.
Nat Toxins ; 4(1): 3-15, 1996.
Article in English | MEDLINE | ID: mdl-8680751

ABSTRACT

Fumonisins are inhibitors of the biosynthesis of sphingosine and more complex sphingolipids. In eucaryotic cells, fumonisin inhibition of sphingolipid biosynthesis is a result of inhibition of the enzyme ceramide synthase. Large increase in free sphinganine concentration in plant and animal cells are observed within a few hours after exposure to fumonisins and/or Alternaria toxins (AAL-toxins). Some of the sphinganine is metabolized to other bioactive intermediates, and some is released from cells. In animals, free sphinganine accumulates in tissues and quickly appears in blood and urine. Free sphingoid bases are toxic to most cells, and complex sphingolipids are essential for normal cell growth. Fumonisin B1 stimulates sphinganine-dependent DNA synthesis in Swiss 3T3 cells, but is mitoinhibitory in other cell types. In cultured cells the accumulation of bioactive long-chain sphingoid bases and depletion of complex sphingolipids are clearly contributing factors in growth inhibition, increased cell death, and (in Swiss 3T3 cells) mitogenicity of fumonisins. While disruption of sphingolipid metabolism directly affects cells, it may indirectly affect some tissues. For example, fumonisin B1 impairs the barrier function of endothelial cells in vitro. Adverse effects on endothelial cells could indirectly contribute to the neurotoxicity and pulmonary edema caused by fumonisins. It is hypothesized that fumonisin-induced changes in the sphingolipid composition of target tissues could directly or indirectly contribute to all Fusarium moniliforme-associated diseases.


Subject(s)
Carcinogens, Environmental/toxicity , Fumonisins , Mycoses/physiopathology , Mycotoxins/toxicity , Sphingolipids/metabolism , Alternaria/metabolism , Animals , Carcinogens, Environmental/metabolism , Cell Division/drug effects , DNA/biosynthesis , Endothelium/cytology , Endothelium/drug effects , Mice , Mycoses/metabolism , Mycotoxins/metabolism , Sphingolipids/antagonists & inhibitors , Sphingolipids/biosynthesis
12.
Adv Exp Med Biol ; 392: 297-306, 1996.
Article in English | MEDLINE | ID: mdl-8850625

ABSTRACT

Fumonisins are inhibitors of sphinganine (sphingosine) N-acyltransferase (ceramide synthase) in vitro, and exhibit competitive-type inhibition with respect to both substrates of this enzyme (sphinganine and fatty acyl-CoA). Removal of the tricarballylic acids from fumonisin B1 reduces the potency by at least 10 fold; and fumonisin A1 (which is acetylated on the amino group) is essentially inactive. Studies with diverse types of cells (hepatocytes, neurons, kidney cells, fibroblasts, macrophages, and plant cells) have established that fumonisin B1 not only blocks the biosynthesis of complex sphingolipids; but also, causes sphinganine to accumulate. Some of the sphinganine is metabolized to the 1-phosphate and degraded to hexadecanal and ethanolamine phosphate, which is incorporated into phosphatidylethanolamine. Sphinganine is also released from cells and, because it appears in blood and urine, can be used as a biomarker for exposure. The accumulation of these bioactive compounds, as well as the depletion of complex sphingolipids, may account for the toxicity, and perhaps the carcinogenicity, of fumonisins.


Subject(s)
Fumonisins , Mycotoxins/toxicity , Sphingolipids/biosynthesis , Amidohydrolases/antagonists & inhibitors , Animals , Cell Death , Ceramidases , Enzyme Inhibitors/toxicity , Humans , Sphingolipids/antagonists & inhibitors
13.
J Nutr ; 125(6 Suppl): 1677S-1682S, 1995 06.
Article in English | MEDLINE | ID: mdl-7782925

ABSTRACT

Sphingolipids are found in all eukaryotic and some prokaryotic organisms and participate in the regulation of cell growth, differentiation, and diverse cell functions including cell-cell communication, cell-substratum interactions and intracellular signal transduction. Nonetheless, the field of nutrition has given scant attention to these compounds so that little is known about the following fundamental questions: What is the fate of sphingolipids that are consumed in food? Does consumption of dietary sphingolipids affect the behavior of cells in the gastrointestinal tract or other organs? How do other factors in the diet affect sphingolipid metabolism? Several recent findings underscore the importance of these questions, for examples: 1) Sphingolipids are digested throughout the GI tract to ceramide and sphingosine, which are highly bioactive compounds that affect cellular regulatory pathways; 2) addition of sphingomyelin to a standard AIN diet (which is essentially devoid of sphingolipids) reduces the appearance of aberrant colonic crypts, and perhaps the number of tumors, in mice treated with a colon carcinogen; and 3) an enzyme of sphingolipid metabolism has been discovered to be the target of a class of toxic and carcinogenic mycotoxins called fumonisins. Given these recent findings, it is possible that some of the confusion that has arisen regarding the relationships between dietary fat and disease might be due to the lack of consideration of the sphingolipids that are also present.


Subject(s)
Diet , Fumonisins , Neoplasms/prevention & control , Sphingolipids/metabolism , Animals , Carcinogens, Environmental/toxicity , Digestion , Humans , Mycotoxins/toxicity , Neoplasms, Experimental/prevention & control
14.
Biotechniques ; 18(2): 256-60, 1995 Feb.
Article in English | MEDLINE | ID: mdl-7727127

ABSTRACT

Dideoxy fingerprinting (ddF) is an efficient method for detecting single base and other sequence changes in PCR-amplified DNA segments. This screening method is a hybrid between single-strand conformation polymorphism analysis (SSCP) and Sanger dideoxy sequencing. It involves a Sanger sequencing reaction with one dideoxynucleotide followed by non-denaturing gel electrophoresis. We are using ddF to screen for mutations in the p53 tumor suppressor gene in primary breast cancers. ddF detected more than 100 mutations in different regions of the gene, including all types of single-base mutations and microdeletions/microinsertions of various sizes. Furthermore, ddF reliably detected heterozygous mutations, if the region of interest was screened in both directions. In a blinded, prospective study, ddF detected all 25 mutations within exons 4-10 and adjacent flanking intronic regions previously found by direct sequencing. ddF was also useful in scoring two common polymorphisms within the p53 gene. Guidelines for preventing false-positive and false-negative results are summarized.


Subject(s)
DNA Fingerprinting/methods , Genes, p53/genetics , Genetic Testing/methods , Breast Neoplasms/genetics , Genetic Carrier Screening/methods , Mutation/genetics , Polymorphism, Genetic/genetics
15.
Oncogene ; 10(4): 681-8, 1995 Feb 16.
Article in English | MEDLINE | ID: mdl-7862445

ABSTRACT

Most studies of mutations in the p53 tumor suppressor gene in tumors have examined only exons 5-8. Our laboratory previously found 64 mutations in exons 5-8 of the p53 gene in 194 primary breast cancers. Herein, we report 18 additional mutations found outside of exons 5-8. Mutations are present in exons 4, 9 and 10, and flanking splice junctions, but not in the promotor region or in exons 1, 2, 3 and 11. No missense mutations are found outside of exons 5-8. Instead, there is a predominance of frameshift mutations with lesser numbers of nonsense and splice site mutations. In contrast, the majority of mutations in exons 5-8 in this sample are missense changes and all of these are at amino acids that are identical in the 11 known p53 sequences that represent about 1.6 billion years of evolutionary divergence. The difference in mutational pattern between these two regions of the p53 gene is due to a lack of missense mutations and inframe microdeletions outside of exons 5-8. A review of our database of p53 mutations (De Vries et al., in preparation) shows that the patterns of mutation inside and outside of exons 5-8 differ in other types of cancers as well. The paucity of missense mutations in exons 2-4 and 9-11 in breast and other cancers (even at amino acids identical throughout p53 gene evolution) suggest that at least some missense mutations result in a phenotype other than malignant transformation. These data also illustrate the importance of examining identical exons when comparing the pattern of p53 gene mutations in different populations.


Subject(s)
Breast Neoplasms/genetics , Genes, p53 , Adult , Aged , Base Sequence , DNA Primers/chemistry , Exons , Female , Humans , Liver Neoplasms/genetics , Lung Neoplasms/genetics , Middle Aged , Molecular Sequence Data , Mutation , Ovarian Neoplasms/genetics , Point Mutation , RNA Splicing , Racial Groups , Sequence Deletion , Skin Neoplasms/genetics
16.
J Clin Invest ; 95(2): 686-9, 1995 Feb.
Article in English | MEDLINE | ID: mdl-7598762

ABSTRACT

Since mutagens produce an extraordinary diversity of mutational patterns, differential mutational exposures among populations are expected to produce different patterns of mutation. Classical epidemiological methods have been successful in implicating specific mutagens in cancers such as those of lung and skin in which one mutagen predominates. In breast cancer, however, no mutagens have been implicated in an unequivocal manner. In an attempt to facilitate epidemiological studies, we have been studying the pattern of p53 gene mutations in breast cancers from multiple populations with high and low breast cancer incidences. We previously reported that breast cancers from Midwest United States, predominantly rural Caucasian women, have a different pattern of p53 gene mutation from populations of Western European women. Herein, we analyze patterns of p53 mutations from Graz, Austria, another population with a high incidence of breast cancer. Among the 60 Austrian breast cancers analyzed, 14 (23%) have a p53 gene mutation in exons 5-9 or in adjacent splice junctions. Analysis of the patterns of mutation shows differences between the "Western European" profile and the Austrian and Midwest United States groups (P = 0.027 and 0.024, respectively). The Austrian pattern is characterized by a high frequency of A:T-->T:A transversions (P = 0.006). The presence of distinct patterns of mutation among the limited number of analyzed populations of Western European origin supports the idea that differential mutagenic exposure and/or genetic differences contribute to breast cancer mutagenesis among geographically distinct Caucasians of Western European origin.


Subject(s)
Breast Neoplasms/genetics , Genes, p53 , Mutation , Tumor Suppressor Protein p53/biosynthesis , Aged , Aged, 80 and over , Antibodies, Monoclonal , Austria , Base Sequence , Breast Neoplasms/metabolism , Breast Neoplasms/pathology , Codon/genetics , DNA Primers , Exons , Female , Frameshift Mutation , Humans , Immunohistochemistry , Introns , Middle Aged , Molecular Sequence Data , Neoplasm Staging , Point Mutation , Polymerase Chain Reaction , Sequence Deletion , Transcription, Genetic , Tumor Suppressor Protein p53/analysis , Tumor Suppressor Protein p53/genetics , White People
17.
Oncogene ; 9(10): 2869-75, 1994 Oct.
Article in English | MEDLINE | ID: mdl-8084591

ABSTRACT

We determined the pattern of mutations in exons 2-11 and adjacent intronic regions in breast cancers from Midwestern US white women. Twenty-one mutations were detected in 53 tumors (39.6%). Comparisons of the pattern of mutations within exons 5-9 showed that the frequency of missense mutations (44%) was lower in breast cancers of US Midwestern women than in most tumor types including breast cancers in other populations. Compared to breast cancers reported in a Scottish population, US women had a high frequency of G:C-->T:A transversions (P = 0.046). These findings suggest that environmental or endogenous factors contribute to p53 mutagenesis in mammary tissue to different extents among different populations. With a median follow-up of 19 months, the presence of a mutation was associated with shorter time to disease recurrence (P = 0.05) and shorter survival (P = 0.003). Putative dominant negative missense-type mutations (missense and in-frame microdeletions; P = 0.001) and null mutations (hemizygous nonsense and frameshift mutations; P = 0.007) were equally ominous. Thus, tumors with missense p53 mutations resulting in over-expression of a dysfunctional but otherwise intact protein have a clinical outcome similar to tumors with null mutations resulting in a truncated or garbled protein.


Subject(s)
Breast Neoplasms/genetics , Genes, p53 , Mutation , Adult , Aged , Aged, 80 and over , Base Sequence , Breast Neoplasms/epidemiology , Breast Neoplasms/physiopathology , DNA Mutational Analysis , DNA, Neoplasm/genetics , Female , Humans , Middle Aged , Molecular Sequence Data , Prognosis , Sequence Deletion , United States/epidemiology
18.
Lancet ; 343(8907): 1195-7, 1994 May 14.
Article in English | MEDLINE | ID: mdl-7909871

ABSTRACT

The pattern of acquired mutations in the p53 gene can be used to study differences in factors contributing to carcinogenesis. We investigated mutations in exons 5-9 and adjacent intronic regions in 47 breast cancers of black women from Michigan, a population with the highest breast-cancer mortality in the US. The 16 mutations detected differed from those of other populations. In particular, the black women had an excess of A:T-->G:C transitions compared with rural white US midwest women. While the causes of the different pattern of acquired mutation remain to be determined, this molecular epidemiological approach detects the consequences of mutagenic processes in specific populations. Mutation patterns will constrain hypotheses to mechanisms consistent with the observed biochemical alterations.


Subject(s)
Black People/genetics , Breast Neoplasms/genetics , Genes, p53/genetics , Mutation , Base Sequence , Breast Neoplasms/mortality , Cohort Studies , Female , Humans , Michigan/epidemiology , Molecular Sequence Data , Point Mutation
19.
J Biol Chem ; 269(5): 3475-81, 1994 Feb 04.
Article in English | MEDLINE | ID: mdl-8106389

ABSTRACT

Consumption of grains contaminated with Fusarium moniliforme (Sheldon) causes liver cancer in rats and has been correlated with esophageal cancer in humans. The causative agents are believed to be a family of compounds known as fumonisins, which bear remarkable structural resemblances to sphingosine and sphinganine, the long-chain (sphingoid) base backbones of sphingolipids. Recently, fumonisin B1 has been shown to block de novo synthesis of sphingolipids by inhibiting sphingosine (sphinganine) N-acyltransferase, which leads to accumulation of sphingoid bases. Because the exogenous addition of sphingosine and sphingosine 1-phosphate to Swiss 3T3 cells has been shown to stimulate DNA synthesis (Zhang, H., Buckley, N.E., Gibson, K., and Spiegel, S. (1990) J. Biol. Chem. 265, 76-81; Zhang, H., Desai, N.N., Olivera, A., Seki, T., Brooker, G., and Spiegel, S. (1991) J. Cell Biol. 114, 155-167), we hypothesized that fumonisins might stimulate DNA synthesis by disrupting sphingolipid metabolism. Fumonisin B1 caused accumulation of sphinganine and sphingosine in Swiss 3T3 fibroblasts and, as occurred when these sphingoid bases were added exogenously, stimulated thymidine incorporation into DNA and augmented the mitogenic effect of insulin in a concentration-dependent manner. The mechanism underlying the mitogenic effect of fumonisin B1 was further investigated by using beta-fluoroalanine to block the initial step of sphingolipid biosynthesis catalyzed by serine palmitoyltransferase. beta-Fluoroalanine reduced sphingoid base accumulation in fumonisin B1-treated fibroblasts and inhibited fumonisin B1-stimulated DNA synthesis, but had no effect on mitogenesis when added alone. Fumonisin B1 did not cause accumulation of sphinganine 1-phosphate; therefore, it appears that sphingoid bases per se can stimulate DNA synthesis. To prove that the 1-phosphate is not obligatory, a 1-deoxysphinganine was synthesized, and it was as potent as sphinganine in stimulating DNA synthesis. These results establish that fumonisin B1 is mitogenic via accumulation of sphingoid bases rather than inhibition of complex sphingolipid biosynthesis per se. Because mitogens can often affect cell transformation, this provides a plausible molecular mechanism to explain the carcinogenicity of fumonisins.


Subject(s)
Carcinogens, Environmental/toxicity , DNA/biosynthesis , Fumonisins , Mycotoxins/toxicity , Sphingolipids/metabolism , 3T3 Cells , Animals , DNA/drug effects , DNA Replication/drug effects , Dose-Response Relationship, Drug , Esophageal Neoplasms/chemically induced , Esophageal Neoplasms/etiology , Fusarium , Humans , Kinetics , Liver Neoplasms/chemically induced , Mice , Models, Biological , Rats , Sphingosine/analogs & derivatives , Sphingosine/metabolism , Sphingosine/pharmacology , Time Factors
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