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1.
Commun Integr Biol ; 8(3): e1017156, 2015.
Article in English | MEDLINE | ID: mdl-26478772

ABSTRACT

A key limiting step in fertility is the search for the oocyte by spermatozoa. Initially, there are tens of millions of sperm cells, but a single one will make it to the oocyte. This may be one of the most severe selection processes designed by evolution, whose role is yet to be understood. Why such a huge redundancy is required and what does that mean for the search process? we discuss here these questions and consequently new lines of interdisciplinary research needed to find possible answers.

2.
J Math Neurosci ; 1(1): 10, 2011 Oct 27.
Article in English | MEDLINE | ID: mdl-22655862

ABSTRACT

Dendritic spines are small protrusions on a neuronal dendrite that are the main locus of excitatory synaptic connections. Although their geometry is variable over time and along the dendrite, they typically consist of a relatively large head connected to the dendritic shaft by a narrow cylindrical neck. The surface of the head is connected smoothly by a funnel or non-smoothly to the narrow neck, whose end absorbs the particles at the dendrite. We demonstrate here how the geometry of the neuronal spine can control diffusion and ultimately synaptic processes. We show that the mean residence time of a Brownian particle, such as an ion or molecule inside the spine, and of a receptor on its membrane, prior to absorption at the dendritic shaft depends strongly on the curvature of the connection of the spine head to the neck and on the neck's length. The analytical results solve the narrow escape problem for domains with long narrow necks.

3.
Physiol Chem Phys Med NMR ; 39(1): 83-8, 2007.
Article in English | MEDLINE | ID: mdl-18613641

ABSTRACT

Oriental hornet workers, kept in an Artificial Breeding Box (ABB) without a queen, construct within a few days brood combs of hexagonal cells with apertures facing down. These combs possess stems that fasten the former to the roof of the ABB. In an ABB with adult workers (more than 24 h after eclosion), exposed to an AC (50 Hz) magnetic field of a magnitude of B = 50-70 mGauss, the combs and cells are built differently from those of a control ABB, subjected only to the natural terrestrial magnetic field. The effects of the additional magnetic field consist of (a) 35-55% smaller number of cells and fewer eggs in each comb, (b) disrupted symmetry of building, with many deformed and imperfectly hexagonal cells, and (c) more delicate and slender comb stems.


Subject(s)
Magnetics , Nesting Behavior/physiology , Wasps/physiology , Animals , Male
4.
Phys Rev E Stat Nonlin Soft Matter Phys ; 72(3 Pt 1): 031910, 2005 Sep.
Article in English | MEDLINE | ID: mdl-16241485

ABSTRACT

The problem of diffusion with absorption and trapping sites arises in the theory of molecular signaling inside and on the membranes of biological cells. In particular, this problem arises in the case of spine-dendrite communication, where the number of calcium ions, modeled as random particles, is regulated across the spine microstructure by pumps, which play the role of killing sites, while the end of the dendritic shaft is an absorbing boundary. We develop a general mathematical framework for diffusion in the presence of absorption and killing sites and apply it to the computation of the time-dependent survival probability of ions. We also compute the ratio of the number of absorbed particles at a specific location to the number of killed particles. We show that the ratio depends on the distribution of killing sites. The biological consequence is that the position of the pumps regulates the fraction of calcium ions that reach the dendrite.


Subject(s)
Calcium/metabolism , Dendrites/physiology , Models, Neurological , Neurons/physiology , Neurotransmitter Agents/metabolism , Synapses/physiology , Synaptic Transmission/physiology , Animals , Calcium/chemistry , Cell Survival , Computer Simulation , Dendrites/chemistry , Diffusion , Humans , Ion Channel Gating/physiology , Models, Statistical , Neurobiology/methods , Neurons/chemistry , Neurotransmitter Agents/chemistry , Synapses/chemistry
5.
Phys Rev E Stat Nonlin Soft Matter Phys ; 70(5 Pt 1): 051912, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15600661

ABSTRACT

The ionic current flowing through a protein channel in the membrane of a biological cell depends on the concentration of the permeant ion, as well as on many other variables. As the concentration increases, the rate of arrival of bath ions to the channel's entrance increases, and typically so does the net current. This concentration dependence is part of traditional diffusion and rate models that predict Michaelis-Menten current-concentration relations for a single ion channel. Such models, however, neglect other effects of bath concentrations on the net current. The net current depends not only on the entrance rate of ions into the channel, but also on forces acting on ions inside the channel. These forces, in turn, depend not only on the applied potential and charge distribution of the channel, but also on the long-range Coulombic interactions with the surrounding bath ions. In this paper, we study the effects of bath concentrations on the average force on an ion in a single ion channel. We show that the force of the reaction field on a discrete ion inside a channel embedded in an uncharged lipid membrane contains a blocking (shielding) term that is proportional to the square root of the ionic bath concentration. We then show that different blocking strengths yield different behavior of the current-concentration and conductance-concentration curves. Our theory shows that at low concentrations, when the blocking force is weak, conductance grows linearly with concentration, as in traditional models, e.g., Michaelis-Menten formulations. As the concentration increases to a range of moderate shielding, conductance grows as the square root of concentration, whereas at high concentrations, with high shielding, conductance may actually decrease with increasing concentrations: the conductance-concentration curve can invert. Therefore, electrostatic interactions between bath ions and the single ion inside the channel can explain the different regimes of conductance-concentration relations observed in experiments.


Subject(s)
Cell Membrane/chemistry , Cell Membrane/physiology , Ion Channel Gating/physiology , Ion Channels/chemistry , Ion Channels/physiology , Models, Biological , Models, Chemical , Animals , Computer Simulation , Humans , Membrane Potentials/physiology
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