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Mol Biol (Mosk) ; 40(5): 835-43, 2006.
Article in Russian | MEDLINE | ID: mdl-17086984

ABSTRACT

Use of polymerase chain reaction helped to establish that the most frequent among naphthalene utilizing bacteria, isolated on the territory of Belarus, are Nah-plasmids of IncP-9 incompatibility group and those with indefinite systematic belonging. With the help of classical test of incompatibility, restriction and sequence analyses three new subgroups within the IncP-9 group were discovered (zeta, eta and IncP-9-like replicons). Conducting of restriction analysis for amplification products of nahG and nahAc genes allowed us to reveal, in addition to known sequences of stated determinants, two new types of nahG gene. Restriction analysis performed on amplification products of 16S RNA genes (ARDRA method) showed that native hosts of Nah-plasmids of IncP-9 group are not only fluorescent bacteria from genus Pseudomonas (P. fluorescens, P. putida, P. aeruginosa, P. species), but also non-fluorescent bacteria with indefinite specific belonging.


Subject(s)
Plasmids/genetics , Pseudomonas/genetics , Genes, Bacterial , Naphthalenes/metabolism , Polymerase Chain Reaction/methods , Polymorphism, Genetic , Pseudomonas/metabolism , RNA, Ribosomal, 16S , Replicon/genetics , Republic of Belarus , Restriction Mapping
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