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Bioinformatics ; 19(16): 2158-60, 2003 Nov 01.
Article in English | MEDLINE | ID: mdl-14594726

ABSTRACT

SUMMARY: Genomic Analysis and Rapid Biological ANnotation (GARBAN) is a new tool that provides an integrated framework to analyze simultaneously and compare multiple data sets derived from microarray or proteomic experiments. It carries out automated classifications of genes or proteins according to the criteria of the Gene Ontology Consortium at a level of depth defined by the user. Additionally, it performs clustering analysis of all sets based on functional categories or on differential expression levels. GARBAN also provides graphical representations of the biological pathways in which all the genes/proteins participate. AVAILABILITY: http://garban.tecnun.es.


Subject(s)
Algorithms , Database Management Systems , Documentation , Gene Expression Profiling/methods , Information Storage and Retrieval/methods , Oligonucleotide Array Sequence Analysis/methods , Proteomics/methods , Software , Databases, Nucleic Acid , Databases, Protein , Genomics/methods , User-Computer Interface
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