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1.
Zhonghua Yu Fang Yi Xue Za Zhi ; 58(6): 898-904, 2024 Jun 06.
Article in Chinese | MEDLINE | ID: mdl-38955739

ABSTRACT

This study aims to explore the diagnostic value of inflammation-related genes in peripheral blood mononuclear cells in bronchopulmonary dysplasia (BPD). By using bioinformatics analysis, three datasets including GSE32472, GSE125873, and GSE220135, which contain whole-genome expression profile data of 251 neonates, were included. The GSE32472 dataset was used as a training dataset to detect differentially expressed genes between non-BPD and BPD neonates in peripheral blood mononuclear cells. The gene enrichment analysis (GSEA) was used to detect the pathway enrichment of up-regulated genes in BPD newborns. The main regulatory factors analysis (MRA) algorithm was used to filter the main regulatory genes in the inflammation-related pathway (GO:0006954). After obtaining the main regulatory genes, the expression of the main regulatory genes in the GSE32472, GSE125873, and GSE220135 datasets was detected. Through the logistic regression model, risk scoring was conducted for neonates, and the risk scores of non-BPD and BPD neonates were compared. Lastly, the classification performance of the model was evaluated using the area under the curve (AUC). The results showed that compared with non-BPD neonates, there were 486 up-regulated genes and 433 down-regulated genes in the peripheral blood mononuclear cells of BPD neonates. The inflammation-related pathway was highly enriched in the up-regulated genes. Ultimately, phospholipase C beta 1 (PLCB1), nidogen 1 (NID1), serum response factor binding protein 1 (SRFBP1), centrosomal protein 72 (CEP72), excision repair cross complementation group 6 like (ERCC6L), and peptidylprolyl isomerase like 1 (PPIL1) were identified as the main regulatory genes. The prediction model's calculation formula for risk score was PLCB1×0.26+NID1×0.97+SRFBP1×1.58+CEP72×(-0.36)+ERCC6L×2.14+PPIL1×0.67. The AUCs in the GSE32472 test dataset, GSE125873 dataset, and GSE220135 dataset were 0.88, 0.86, and 0.89, respectively. This prediction model could distinguish between non-BPD and BPD neonates. In conclusion, the prediction model based on inflammation-related pathway genes has a certain diagnostic value for BPD.


Subject(s)
Bronchopulmonary Dysplasia , Inflammation , Humans , Bronchopulmonary Dysplasia/genetics , Infant, Newborn , Inflammation/genetics , Leukocytes, Mononuclear/metabolism , Gene Expression Profiling , Computational Biology
2.
Zhonghua Yu Fang Yi Xue Za Zhi ; 58(2): 171-176, 2024 Feb 06.
Article in Chinese | MEDLINE | ID: mdl-38387946

ABSTRACT

Infectious diseases are the leading cause of death in children. Sepsis is a critical infectious disease that causes death in children globally, with a high morbidity and mortality rate. It poses a serious threat to children's health. Early diagnosis has become the key to treating severe sepsis. The establishment of animal models of sepsis can help people better diagnose sepsis and take interventions to improve the prognosis of sepsis patients. This study reviews the types, advantages and disadvantages of existing animal models of sepsis and proposes the optimization of these models to provide a reference basis for the selection and optimization of experimental models and the promotion of the "reverse transformation" of sepsis into clinical practice.


Subject(s)
Disease Models, Animal , Sepsis , Animals , Child , Humans , Early Diagnosis , Models, Animal , Sepsis/diagnosis
3.
Zhonghua Yu Fang Yi Xue Za Zhi ; 55(9): 1028-1032, 2021 Sep 06.
Article in Chinese | MEDLINE | ID: mdl-34619917

ABSTRACT

Genetic factors are the main causes in occurrence of birth defects. With deep research in the field of genomics and application of molecular biology technology, the carrier status, fetal genetic variation and postpartum screening are respectively detected from pre-pregnancy, pregnancy and post-natal screening (before onset of disease) under perfect three-level prevention and control system for birth defects. Prospective detection, early diagnosis and intervention can prevent the occurrence of birth defects related to genetic diseases at multiple levels. This article describes and analyzes current clinical application and existing challenge of molecular biology techniques in prevention of birth defects related to genetic diseases.


Subject(s)
Molecular Biology , Prenatal Care , Female , Humans , Pregnancy , Prospective Studies , Technology , Tertiary Prevention
4.
Zhonghua Er Ke Za Zhi ; 57(8): 597-602, 2019 Aug 02.
Article in Chinese | MEDLINE | ID: mdl-31352744

ABSTRACT

Objective: To study the relationship between human cytomegalovirus (HCMV) envelope glycoprotein gene H and clinical features of children with congenital cytomegalovirus infection. Methods: A cohort study was conducted. Newborns diagnosed with congenital cytomegalovirus infection, hospitalized in the Department of Neonatology and Neonatal Intensive Care Unit (NICU) of the Children's Hospital, Zhejiang University School of Medicine, were included from July 2013 to December 2015.HCMV-DNA gH typing in urine, sputum or blood was conducted. Patients then were divided into gH1 group and gH2 group according to gH genotypes. Patients' data during hospitalization in newborn and 3-5 years of follow-up were collected.The relationships between gH genotype and clinical manifestations, laboratory examinations, hearing loss and neurological prognosis were analyzed by chi-square test, t test and non-parametric test. Results: A total of 21 cases were enrolled as congenital HCMV infection and followed-up for 3-5 years. Among them, 14 (67%) were gH1 type and 7 (33%) were gH2 type. No mixed infection was found. In the two groups, there were no significant differences in the ratio of males (9/14 vs. 3/7,P=0.397), or birth weight ((2 609±686) vs. (3 021±451) g, t=-1.436, P=0.167). Gestational age of gH1 group was younger than that of gH2 group (38 (29-40) vs. 39(38-40) weeks, Z=-2.18, P=0.029). Moderate to severe hearing loss detected by neonatal auditory brainstem response were found in 40 ears (20 cases). It was higher in gH1 group than that in gH2 group (4/22 vs.0/18, χ(2)=5.145, P=0.023). In the imaging examination of the nervous system, the Alarcon score of gH1 group was lower than that of gH2 group (0.4±0.3 vs. 1.3±1.1, t=-2.459,P=0.024).No significant statistical difference was found in the probability of motor or language development lag in gH2 group and gH1 group (4/7 vs.4/14, P=0.346). Conclusions: Compared with gH2 infection, gH1 infection in children has a younger gestational age. The major type of hearing loss in neonatal period is gH1 infection. Children with gH2 congenital infections are more likely to suffer from nervous systems damage.


Subject(s)
Cytomegalovirus Infections/congenital , Cytomegalovirus Infections/virology , Cytomegalovirus/classification , Cytomegalovirus/genetics , Viral Envelope Proteins/genetics , Child , Cohort Studies , Cytomegalovirus/isolation & purification , Cytomegalovirus Infections/genetics , DNA Primers , Genotype , Humans , Infant, Newborn , Male
5.
Acta Virol ; 58(2): 103-7, 2014.
Article in English | MEDLINE | ID: mdl-24957713

ABSTRACT

Human cytomegalovirus (HCMV) ORF UL128 protein is highly conserved among viral field isolates and functions in two different molecular forms, monomeric UL128 protein and in a complex with glycoproteins gH, gL, UL130, and UL131A protein. Monomeric UL128 protein works as soluble chemokine analogue to attract peripheral blood mononuclear cells (PBMCs) and selectively induces expression of interleukin 6 (IL-6) and tumor necrosis factor α (TNF-α) in PBMCs. The gH/gL/UL128/UL130/UL131A complex is indispensable for entry into both endothelial and epithelial cells. In conclusion, UL128 plays an important role in HCMV infection.


Subject(s)
Cytomegalovirus Infections/virology , Cytomegalovirus/metabolism , Membrane Glycoproteins/metabolism , Viral Envelope Proteins/metabolism , Animals , Cytomegalovirus/genetics , Gene Expression Regulation, Viral , Humans , Membrane Glycoproteins/genetics , Protein Binding , Viral Envelope Proteins/genetics
7.
Appl Opt ; 28(9): 1618-23, 1989 May 01.
Article in English | MEDLINE | ID: mdl-20548715

ABSTRACT

We have used a 100-mW cw laser diode array to amplify the light from a low power, single stripe diode laser (both lasers commercially available). The input light was spectrally narrowed and frequency stabilized to <300 kHz using optical feedback from a Fabry-Perot cavity, and the amplified beam had the same spectral characteristics. Also, the ~90-mW amplified beam had a single diffraction-limited spatial mode corresponding to the full 100-microm width of the array, indicating that all its stripes were coherent. When viewing the output of the free-running laser array, we observe that the input light causes its output spectrum and spatial distribution to be dramatically narrowed. We have tested a simple quantitative model of this process.

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