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1.
Entropy (Basel) ; 26(5)2024 Apr 30.
Article in English | MEDLINE | ID: mdl-38785634

ABSTRACT

In brain imaging segmentation, precise tumor delineation is crucial for diagnosis and treatment planning. Traditional approaches include convolutional neural networks (CNNs), which struggle with processing sequential data, and transformer models that face limitations in maintaining computational efficiency with large-scale data. This study introduces MambaBTS: a model that synergizes the strengths of CNNs and transformers, is inspired by the Mamba architecture, and integrates cascade residual multi-scale convolutional kernels. The model employs a mixed loss function that blends dice loss with cross-entropy to refine segmentation accuracy effectively. This novel approach reduces computational complexity, enhances the receptive field, and demonstrates superior performance for accurately segmenting brain tumors in MRI images. Experiments on the MICCAI BraTS 2019 dataset show that MambaBTS achieves dice coefficients of 0.8450 for the whole tumor (WT), 0.8606 for the tumor core (TC), and 0.7796 for the enhancing tumor (ET) and outperforms existing models in terms of accuracy, computational efficiency, and parameter efficiency. These results underscore the model's potential to offer a balanced, efficient, and effective segmentation method, overcoming the constraints of existing models and promising significant improvements in clinical diagnostics and planning.

2.
Sensors (Basel) ; 23(24)2023 Dec 05.
Article in English | MEDLINE | ID: mdl-38139466

ABSTRACT

An indoor localization system based on the RSSI-APIT algorithm is designed in this study. Integrated RSSI (received signal strength indication) and non-ranging APIT (approximate perfect point-in-triangulation test) localization methods are fused with machine learning in order to improve the accuracy of the indoor localization system. The system focuses on the improvement of preprocessing and localization algorithms. The primary objective of the system is to enhance the preprocessing of the acquired RSSI data and optimize the localization algorithm in order to enhance the precision of the coordinates in the indoor localization system. In order to mitigate the issue of significant fluctuations in RSSI, a technique including the integration of Gaussian filtering and an artificial neural network (ANN) is employed. This approach aims to preprocess the acquired RSSI data, thus reducing the impact of multipath effects. In order to address the issue of low localization accuracy encountered by the conventional APIT localization algorithm during wide-area localization, the RSSI ranging function is incorporated into the APIT localization algorithm. This addition serves to further narrow down the localization area. Consequently, the resulting localization algorithm is referred to as the RSSI-APIT positioning algorithm. Experimental results have demonstrated the successful reduction of inherent localization errors within the system by employing the RSSI-APIT positioning algorithm. The present study aims to investigate the impact of the localization scene and the number of anchors on the RSSI-APIT localization algorithm, with the objective of enhancing the performance of the indoor localization system. The conducted experiments demonstrated that the enhanced system exhibits several advantages. Firstly, it successfully decreased the frequency of anchor calls, resulting in a reduction in the overall operating cost of the system. Additionally, it effectively enhanced the accuracy and stability of the system's localization capabilities. In a complex environment of 100 m2 in size, compared with the traditional trilateral localization method and the APIT localization algorithm, the RSSI-APIT localization algorithm reduced the localization error by about 2.9 m and 1.8 m, respectively, and the overall error was controlled within 1.55 m.

3.
Sci Rep ; 8(1): 3605, 2018 Feb 26.
Article in English | MEDLINE | ID: mdl-29483560

ABSTRACT

In the surface-enhanced fluorescence (SEF) process, it is well known that the plasmonic nanostructure can enhance the light emission of fluorescent emitters. With the help of atomic force microscopy, a hybrid system consisting of a fluorescent nanodiamond and a gold nanoparticle was assembled step-by-step for in situ optical measurements. We demonstrate that fluorescent emitters can also enhance the light emission from gold nanoparticles which is judged through the intrinsic anti-Stokes emission owing to the nanostructures. The light emission intensity, spectral shape, and lifetime of the hybrid system were dependent on the coupling configuration. The interaction between gold nanoparticles and fluorescent emitter was modelled based on the concept of a quantised optical cavity by considering the nanodiamond and the nanoparticle as a two-level energy system and a nanoresonator, respectively. The theoretical calculations reveal that the dielectric antenna effect can enhance the local field felt by the nanoparticle, which contributes more to the light emission enhancement of the nanoparticles rather than the plasmonic coupling effect. The findings reveal that the SEF is a mutually enhancing process. This suggests the hybrid system should be considered as an entity to analyse and optimise surface-enhanced spectroscopy.

4.
Atherosclerosis ; 251: 31-38, 2016 08.
Article in English | MEDLINE | ID: mdl-27240253

ABSTRACT

BACKGROUND AND AIMS: Anti-HMGB1 autoimmunity plays a role in systemic lupus erythematosus (SLE). Because SLE increases atherosclerosis, we asked whether the same autoimmunity might play a role in atherogenesis. METHODS: We looked for the induction of HMGB1-specific B and T cell responses by a western-type diet (WTD) in the Apoe(-/-) mouse model of atherosclerosis. We also determined whether modifying the responses modulates atherosclerosis. RESULTS: In the plasma of male Apoe(-/-) mice fed WTD, the level of anti-HMGB1 antibodies (Abs) was detected at ∼50 µg/ml, which was ∼6 times higher than that in either Apoe(-/-) mice fed a normal chow or Apoe(+/+) mice fed WTD (p ≤ 0.0005). The Abs were directed largely toward a novel, dominant epitope of HMGB1 named HMW4; accordingly, compared with chow-fed mice, WTD-fed Apoe(-/-) mice had more activated HMW4-reactive B and T cells (p = 0.005 and p = 0.01, respectively). Compared with mock-immunized mice, Apoe(-/-) mice immunized with HMW4 along with an immunogenic adjuvant showed proportional increases in anti-HMW4 IgG and IgM Abs, HMW4-reactive B-1 and B-2 cells, and HMW4-reactive Treg and Teff cells, which was associated with ∼30% increase in aortic arch lesions (p ≤ 0.01) by two methods. In contrast, Apoe(-/-) mice immunized with HMW4 using a tolerogenic adjuvant showed preferential increases in anti-HMW4 IgM (over IgG) Abs, HMW4-reactive B-1 (over B-2) cells, and HMW4-specific Treg (over Teff) cells, which was associated with ∼40% decrease in aortic arch lesions (p ≤ 0.03). CONCLUSIONS: Anti-HMGB1 autoimmunity may potentially play a role in atherogenesis.


Subject(s)
Atherosclerosis/genetics , Autoimmunity/genetics , Diet, Western/adverse effects , HMGB1 Protein/genetics , Animals , Antigens/blood , Aorta, Thoracic/pathology , B-Lymphocytes/immunology , Disease Models, Animal , Enzyme-Linked Immunosorbent Assay , Epitopes/chemistry , Inflammation , Lipids/blood , Lipids/chemistry , Male , Mice , Mice, Inbred C57BL , Mice, Knockout, ApoE
5.
Nanoscale ; 8(4): 2188-94, 2016 Jan 28.
Article in English | MEDLINE | ID: mdl-26731570

ABSTRACT

Luminescence quantum yields (QYs) of gold nanoparticles including nanorods, nanobipyramids and nanospheres are measured elaborately at a single nanoparticle level with different excitation wavelengths. It is found that the QYs of the nanostructures are essentially dependent on the excitation wavelength. The QY is higher when the excitation wavelength is blue-detuned and close to the nanoparticles' surface plasmon resonance peak. A phenomenological model based on the plasmonic resonator concept is proposed to understand the experimental findings. The excitation wavelength dependent QY is attributed to the wavelength dependent coupling efficiency between the free electron oscillation and the intrinsic plasmon resonant radiative mode. These studies should contribute to the understanding of one-photon luminescence from metallic nanostructures and plasmonic surface enhanced spectroscopy.

6.
Nanoscale ; 7(2): 577-82, 2015 Jan 14.
Article in English | MEDLINE | ID: mdl-25418974

ABSTRACT

Anti-Stokes one-photon luminescence from a single gold nanorod is experimentally investigated. The anti-Stokes emission of gold nanorods is enhanced and strongly modulated by localized surface plasmon resonance (LSPR). It is found that the polarization dependence of the anti-Stokes emission is in strong correlation with that of the Stokes emission. Further experiments provide evidence that LSPR significantly enhanced both excitation and emission processes. Moreover, the line shape of the anti-Stokes emission is dependent on the surface temperature, which is related to the distribution of free electrons near the Fermi level. This discovery provides an effective method in principle to probe localized temperature at nanoscale dimension. Here, the reported results about the anti-Stokes emission provide more understanding for the photoemission process from the plasmonic nanostructures.

7.
Nanoscale ; 6(13): 7512-8, 2014 Jul 07.
Article in English | MEDLINE | ID: mdl-24887425

ABSTRACT

A three-dimensional corrugated metal tapered probe with surface corrugated gratings at the tip apex is proposed and investigated theoretically, which leads to an obvious emission beaming effect of spontaneous emission from a single emitter near the probe. In contrast with conventional apertureless metal probes, where only the enhancement of an optical near-field is concerned, the corrugated probe is able to manipulate local excitation intensity and far-field emission direction simultaneously. The angular emission from a single dipole source, being placed close to the corrugated probe, falls into a cone with a maximum directivity angle of ±11.6°, which improves the collection efficiency 25-fold. Such a probe simultaneously increases the localized field intensity to about twice as strong as the conventional bare tip. In addition, the radiation pattern is sensitive to the working wavelength and the dipole to tip-apex separation. These findings make a promising route to the development of plasmonic spontaneous emission manipulation based on corrugated tapered antenna-for instance, tip-enhanced spectroscopy, single-molecule sensing, and single-photon source.

8.
Sci Rep ; 4: 3867, 2014 Jan 27.
Article in English | MEDLINE | ID: mdl-24463794

ABSTRACT

We report detailed investigations of the photoluminescence (PL) generated from an individual gold nanoflower, a highly branched plasmonic nanoparticle. Compared to nanostructures with simple shapes, such as spheres, nanorods, and bipyramids, nanoflowers exhibit more distinct features, i.e., the PL spectra and far-field emission patterns are strongly dependent on the wavelength and polarization of the excitation light. The experimental results are qualitatively explained using theoretical calculations. In addition, the intrinsic PL signal is highly dominated by localized surface plasmon resonances. The crucial role of plasmonic coupling in complex nanostructures during the plasmon-enhanced PL process is highlighted. The findings contribute to a deeper understanding of the PL properties of metallic nanoparticles. This study will be beneficial for several potential applications, including optical imaging and sensing in the fields of materials science and biology.

9.
Nanotechnology ; 24(28): 285502, 2013 Jul 19.
Article in English | MEDLINE | ID: mdl-23792456

ABSTRACT

Plasmonic refractometric nanosensors based on single nanostructures, i.e. spherical, nanorodand bipyramid-shaped gold nanoparticles, are investigated and compared numerically by employing the finite-difference time-domain method. The results show that the plasmonic sensing ability is distributed anisotropically around the nanorod and bipyramid, even for spherical nanoparticles when the illumination light is linearly polarized. To optimize nanosensor performance, some anisotropy in the shape of nanoparticles is required, this latter serving as an intrinsic light polarization filter to suppress the disturbance from localized surface plasmon resonance in other directions. The plasmonic near-field can be engineered by controlling the shape to achieve a concentrated and localized electromagnetic field, in direct relation with the sensing ability. Taking these factors into account, the gold bipyramid nanoconstruct which is easily available in experiment is proposed as an efficient plasmonic sensing platform. The bipyramid presents both highly localized sensitivity and high scattering cross-section, thus avoiding the trade-off during the selection of the widely used nanorod-shaped sensors. The parameters of the bipyramid structure can be optimized by numerical simulation to improve the plasmonic sensing. Our findings permit a deeper understanding of single-nanoparticle-sensor behavior, and the study provides an opportunity to optimize the plasmonic sensor.


Subject(s)
Gold/chemistry , Metal Nanoparticles/chemistry , Metal Nanoparticles/ultrastructure , Surface Plasmon Resonance/methods , Computer Simulation , Sensitivity and Specificity , Silicon Dioxide/chemistry , Water/chemistry
10.
Nanoscale ; 5(14): 6545-51, 2013 Jul 21.
Article in English | MEDLINE | ID: mdl-23760562

ABSTRACT

We propose and justify by the finite-difference time-domain method an efficient strategy to enhance the spontaneous emission of a fluorophore with a multi-resonance plasmonic antenna. The custom-designed asymmetrical antenna consists of two plasmonic nanoparticles with different sizes and is able to couple efficiently to free space light through multiple localized surface plasmon resonances. This design simultaneously permits a large near-field excitation near the antenna as well as a high quantum efficiency, which results in an unusual and significant enhancement of the fluorescence of a single emitter. Such an asymmetrical antenna presents intrinsic advantages over single particle or dimer based antennas made using two identical nanostructures. This promising concept can be exploited in the large domain of light-matter interaction processes involving multiple frequencies.

11.
BMC Syst Biol ; 7: 32, 2013 Apr 12.
Article in English | MEDLINE | ID: mdl-23587307

ABSTRACT

BACKGROUND: Essential hypertension (EH) is a complex disease as a consequence of interaction between environmental factors and genetic background, but the pathogenesis of EH remains elusive. The emerging tools of network medicine offer a platform to explore a complex disease at system level. In this study, we aimed to identify the key proteins and the biological regulatory pathways involving in EH and further to explore the molecular connectivities between these pathways by the topological analysis of the Protein-protein interaction (PPI) network. RESULT: The extended network including one giant network consisted of 535 nodes connected via 2572 edges and two separated small networks. 27 proteins with high BC and 28 proteins with large degree have been identified. NOS3 with highest BC and Closeness centrality located in the centre of the network. The backbone network derived from high BC proteins presents a clear and visual overview which shows all important regulatory pathways for blood pressure (BP) and the crosstalk between them. Finally, the robustness of NOS3 as central protein and accuracy of backbone were validated by 287 test networks. CONCLUSION: Our finding suggests that blood pressure variation is orchestrated by an integrated PPI network centered on NOS3.


Subject(s)
Hypertension/physiopathology , Nitric Oxide Synthase Type III/metabolism , Protein Interaction Maps/physiology , Blood Pressure/physiology , Computational Biology/methods , Genetic Association Studies/methods , Humans , Hypertension/metabolism , Protein Interaction Maps/genetics
12.
Zhonghua Wei Chang Wai Ke Za Zhi ; 9(1): 41-5, 2006 Jan.
Article in Chinese | MEDLINE | ID: mdl-16437370

ABSTRACT

OBJECTIVE: To study the gastric function after esophagectomy and cardiectomy with vagus nerve preserved and reconstruction of gastric funds (VPRG)in patients with esophageal cancer (EC) and cardiac cancer (CC). METHODS: Sixty-eight patients with early or middle staged EC or CC received esophagectomy and cardiectomy with vagus nerve preserved and reconstruction of gastric funds (VPRG),while other 68 patients esophagectomy and cardiectomy with vagus nerve severed and no reconstruction of gastric funds (VSNG) as control. The symptoms,the pressure of the residual esophagus and thoracic stomach, 24-hour pH monitoring, mean basic gastric acid output, gastric emptying time of the intrathoracic stomach,fasting serum gastrin level, fibreoptic endoscopic results were compared before and after operation between the two groups. RESULTS: The patients with VPRG had less symptoms after operation than those with VSNG such as anorexia, belch, reflux, heartburn, nausea, diarrhea, postcibal satiety (P< 0.01). In VPRG group,compared with the results before operation,there were no significant differences in 24-hour pH monitoring,the mean basic gastric acid output, the fasting serum gastrin level,the gastric emptying time of intrathoracic stomach one month and one year after operation (both P > 0.05). The pressure of the residual esophagus above the anastomosis in VPRG group was significantly higher than that in VSNG group (both P< 0.05). Fibreoptic endoscopic examination revealed higher incidences of postoperative atrophic gastritis and reflux esophagitis in VPRG group one month and one year after operation than those in VSNG group (P< 0.01). CONCLUSION: Preservation of the vagus nerve and reconstruction of gastric funds after esophagectomy and cardiectomy for esophageal and cardiac cancer can prevent digestive disorder and improve the life quality of the patients.


Subject(s)
Esophageal Neoplasms/surgery , Esophagectomy/methods , Plastic Surgery Procedures/methods , Stomach/physiopathology , Adult , Female , Humans , Male , Middle Aged , Vagus Nerve/surgery
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