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1.
Article in English | MEDLINE | ID: mdl-38334269

ABSTRACT

A novel Gram-positive strain WQ 127069T that was isolated from the soil of Baima Snow Mountain, a habitat of highly endangered Yunnan snub-nosed monkeys (Rhinopithecus bieti), was subjected to a polyphasic taxonomic study. Phylogenetic analysis based on the 16S rRNA gene sequences showed that the isolate belongs to the genus Paenibacillus, showing 98.4 and 96.08 % sequence similarity to the type strains Paenibacillus periandrae PM10T and Paenibacillus foliorum LMG 31456T, respectively. The G+C content of the genomic DNA of strain WQ127069T was 45.6 mol%. The predominant isoprenoid quinone was MK-7, and meso-diaminopimelic acid was present in peptidoglycan. The major cellular fatty acids were antiiso-C15 : 0, iso-C15 : 0 and C16 : 0. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and phosphatidylmonomethylethanolamine. The whole genome average nucleotide identity and digital DNA-DNA hybridization values between strain WQ 127069T and strain PM10T were 93.2 and 52.5 %, respectively. Growth occurred at 5-40 °C (optimally at 20-35 °C), pH 6-8 (optimally at pH7.0) and with 0.5-2 % (w/v) NaCl (optimally at 0.5 %). On the basis of the taxonomic evidence, a novel species, Paenibacillus baimaensis sp. nov., is proposed. The type strain is WQ 127069T (=KCTC 43480T=CCTCC AB 2022381T).


Subject(s)
Paenibacillus , Presbytini , Animals , Fatty Acids/chemistry , Phylogeny , RNA, Ribosomal, 16S/genetics , Soil , DNA, Bacterial/genetics , Base Composition , Bacterial Typing Techniques , Sequence Analysis, DNA , China , Ecosystem
2.
Plant Physiol ; 192(4): 2803-2821, 2023 08 03.
Article in English | MEDLINE | ID: mdl-37144829

ABSTRACT

Plants have evolved multiple mechanisms to cope with diverse types of light stress, particularly the regulation of the electron transport chain (ETC). Under high light (HL) conditions, the balance of electron flux in the ETC is disturbed, which leads to the overaccumulation of reactive oxygen species (ROS) and results in photodamage and photoinhibition. The cytochrome (Cyt) b6/f complex, which coordinates electron transfer between photosystems I and II (PSI and PSII), plays an essential role in regulating the ETC and initiating photoprotection. However, how the Cyt b6/f complex is maintained under HL conditions remains unclear. Here, we report that the activity of the Cyt b6/f complex is sustained by thylakoid-localized cyclophilin 37 (CYP37) in Arabidopsis (Arabidopsis thaliana). Compared with wild-type plants, cyp37 mutants displayed an imbalance in electron transport from Cyt b6/f to PSI under HL stress, which led to increased ROS accumulation, decreased anthocyanin biosynthesis, and increased chlorophyll degradation. Surprisingly, CYP37's role in regulating ETC balance was independent of photosynthesis control, which was indicated by a higher Y (ND), an indicator of P700 oxidation in PSI. Furthermore, the interaction between CYP37 and photosynthetic electron transfer A (PetA), a subunit of the Cyt b6/f complex, suggests that the central function of CYP37 is to maintain Cyt b6/f complex activity rather than to serve as an assembly factor. Our study provides insights into how plants balance electron flow between PSII and PSI via Cyt b6/f complex under HL.


Subject(s)
Arabidopsis , Electron Transport/physiology , Arabidopsis/genetics , Arabidopsis/metabolism , Cyclophilins/genetics , Cyclophilins/metabolism , Cytochromes b6/metabolism , Reactive Oxygen Species/metabolism , Chlorophyll/metabolism , Photosynthesis/physiology , Photosystem I Protein Complex/genetics , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Cytochrome b6f Complex/genetics , Cytochrome b6f Complex/metabolism , Plants/metabolism
3.
J Am Chem Soc ; 144(19): 8676-8682, 2022 05 18.
Article in English | MEDLINE | ID: mdl-35507412

ABSTRACT

Artificial photocatalytic CO2 reduction, using water as the reductant, is challenging mainly because it is difficult for multiple functional units to cooperate efficiently. Here, we show that the classic photosensitive and H2O-oxidizing ruthenium bipyridyl units and CO2-reducing cobalt imidazolate units can be incorporated into a metal-organic framework using a classic organic ligand, imidazo[4,5-f][1,10]phenanthroline. Under visible light without additional sacrificial agents and photosensitizers, the overall conversion of CO2 and H2O to CO and O2 was achieved by the multifunctional photocatalyst in the CH3CN/H2O mixed solvent with a high CO production rate of 11.2 µmol g-1 h-1 and CO selectivity of ca. 100%. Thanks to its ultramicroporous structure with moderately strong CO2 adsorption ability, the photocatalyst also exhibited high performances with CO/CH4 production rates of 5.15/0.62 and 4.26/0.20 µmol g-1 h-1 in the gas phase with pure and even diluted CO2, respectively. Photoluminescence emission spectroscopy and photoelectrochemical tests confirmed that the photosensitive and catalytic units cooperated well to give suitable photocatalytic redox potentials and fast electron-hole separation.


Subject(s)
Metal-Organic Frameworks , Ruthenium , 2,2'-Dipyridyl , Carbon Dioxide/chemistry , Cobalt/chemistry , Metal-Organic Frameworks/chemistry , Ruthenium/chemistry
4.
Curr Microbiol ; 79(3): 92, 2022 Feb 07.
Article in English | MEDLINE | ID: mdl-35129696

ABSTRACT

A novel bacterium designated WQ 366 T was isolated from the faeces of Bos taurus, foraging on the slopes of the Baima Snow Mountain in Yunnan, China. The isolate grew optimally at 30 â„ƒ and pH 7.0-8.0 without NaCl. The cells were Gram-stain-negative, aerobic, rod-shaped, non-gliding, catalase-positive, and produced yellow color colonies on Columbia Agar. A polyphasic study was applied to clarify its taxonomic position through 16S rRNA gene and genome sequence analysis, and other extensive biological typing. Phylogenetic analysis revealed that the isolate was affiliated to the genus Sphingobacterium and its 16S rRNA gene sequence was closely related to Sphingobacterium bovisgrunnientis YK2 T (97.3%), Sphingobacterium composti T5-12 T (96.4%), and Sphingobacterium cavernae 5.0403-2 T (96.4%). The calculated whole genome average nucleotide identity (ANI) and the digital DNA-DNA hybridization values between strain WQ 366 T and the three related strains were 78.3, 78.6, 73.9 and 21.2, 21.2, 21.0%, respectively. The predominant fatty acids (>10%) were iso-C15:0, iso-C17:0 3-OH, Summed Feature 3 (C16:1 ω7c and/or C16:1 ω6c), and Summed feature 9 (iso-C17:1 ω9c and 10-methyl C16:0). The main polar lipids were PE, GPL, GL, and PL. MK-7 was the major menaquinone. The genome size and the G + C content of WQ 366 T was 4.1 Mb and 34.6%, respectively. All these results indicated that strain WQ 366 T represents a novel species of the Sphingobacterium genus. Therefore, the name Sphingobacterium bovistauri sp. nov. is proposed, and the type strain is WQ 366 T (= CCTCC AA 2020029 T = KCTC 82395 T).


Subject(s)
Sphingobacterium , Animals , Bacterial Typing Techniques , Cattle , China , DNA, Bacterial/genetics , Fatty Acids , Feces , Phylogeny , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Sphingobacterium/genetics , Vitamin K 2
5.
Plant Biotechnol J ; 20(4): 748-760, 2022 04.
Article in English | MEDLINE | ID: mdl-34837319

ABSTRACT

Sorghum bicolor (L.) Moench, the fifth most important cereal worldwide, is a multi-use crop for feed, food, forage and fuel. To enhance the sorghum and other important crop plants, establishing gene function is essential for their improvement. For sorghum, identifying genes associated with its notable abiotic stress tolerances requires a detailed molecular understanding of the genes associated with those traits. The limits of this knowledge became evident from our earlier in-depth sorghum transcriptome study showing that over 40% of its transcriptome had not been annotated. Here, we describe a full spectrum of tools to engineer, edit, annotate and characterize sorghum's genes. Efforts to develop those tools began with a morphogene-assisted transformation (MAT) method that led to accelerated transformation times, nearly half the time required with classical callus-based, non-MAT approaches. These efforts also led to expanded numbers of amenable genotypes, including several not previously transformed or historically recalcitrant. Another transformation advance, termed altruistic, involved introducing a gene of interest in a separate Agrobacterium strain from the one with morphogenes, leading to plants with the gene of interest but without morphogenes. The MAT approach was also successfully used to edit a target exemplary gene, phytoene desaturase. To identify single-copy transformed plants, we adapted a high-throughput technique and also developed a novel method to determine transgene independent integration. These efforts led to an efficient method to determine gene function, expediting research in numerous genotypes of this widely grown, multi-use crop.


Subject(s)
Gene Editing , Sorghum , Agrobacterium/genetics , Edible Grain/genetics , Plants, Genetically Modified/genetics , Sorghum/genetics
6.
Article in English | MEDLINE | ID: mdl-34382925

ABSTRACT

A novel Gram-stain-negative strain, WQ 117T, isolated from the faeces of Rhinopithecus bieti collected at Yunnan Snub-nosed Monkey National Park, Yunnan province, PR China, was subjected to a polyphasic taxonomic study. The results of phylogenetic analysis based on 16S rRNA gene sequences indicated that the isolate represented a member of the genus Faecalibacter, sharing 97.64 % sequence similarity with the type strain Faecalibacter macacae YIM 102668T. The G+C content of the genomic DNA of WQ117T was 30.5 mol%. The predominant isoprenoid quinone was MK-6. The major cellular fatty acids was iso-C15 : 0. The whole genome average nucleotide identity (gANI) values and the digital DNA-DNA hybridization values between WQ 117T and YIM 102668T were 79.66 % and 22.20 %, respectively. Growth occurred at 0-50 °C (optimally at 28-35 °C), pH 7.0-9.0 (optimally at pH 8.0) and with 0-2 % (w/v) NaCl (optimally without NaCl). On the basis of the taxonomic evidence, a novel species, Faecalibacter rhinopitheci sp. nov., is proposed. The type strain is WQ 117T (=KCTC 82394T=CCTCC AA 2020027T).


Subject(s)
Bacteroidetes/classification , Phylogeny , Presbytini , Animals , Bacterial Typing Techniques , Bacteroidetes/isolation & purification , Base Composition , China , DNA, Bacterial/genetics , Fatty Acids/chemistry , Feces/microbiology , Nucleic Acid Hybridization , Presbytini/microbiology , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA , Vitamin K 2/analogs & derivatives , Vitamin K 2/chemistry
7.
Arch Microbiol ; 203(7): 4629-4634, 2021 Sep.
Article in English | MEDLINE | ID: mdl-34165622

ABSTRACT

A novel bacterium, WQ 047T, was isolated from the faeces of Rhinopithecus bieti, a highly endangered primate endemic to China. The cells were aerobic, oval/rod-shaped, Gram-stain-negative, non-motile, catalase positive, and produced yellow pigmented colonies on Columbia Agar. The taxonomic position of WQ 047T was clarified by applying a polyphasic study based on 16S rRNA gene sequence phylogenetic analysis, extensive biological typing, and whole genome sequencing. Phylogenetic analysis indicated that stain WQ 047T belonged to the genus Sphingobacterium and its 16S rRNA gene sequence exhibited 96.47% pairwise similarity with that of the closest relatives Sphingobacterium nematocida M-SX103T. The calculated whole genome average nucleotide identity (ANI) value between strain WQ 047T and strain M-SX103 was 72.3%. The digital DNA-DNA hybridization value of strain WQ 047T and M-SX103T was 15.73%, which was obtained by calculating the genome-to-genome distance. The major fatty acids were C15:0 iso, C17:0 iso 3-OH, Summed Feature 3 (C16:1 ω7c/C16:1 ω6c) and Summed feature 9 (iso-C17:1ω9c and/or 10-methyl C16:0). The predominant polar lipids were PE, PL and APL. MK-7 was the predominant menaquinone. The G + C content of WQ 047T was 34.89 mol% according to genome analysis. All these characteristics were consistent with those of the genus of Sphingobacterium. Therefore, based on these results, we propose a novel species for which the name Sphingobacterium rhinopitheci sp. Nov. is proposed, with the type strain WQ 047T (= CCTCC AA 2020026T = KCTC82393T).


Subject(s)
Presbytini , Sphingobacterium , Animals , China , Fatty Acids/analysis , Feces/microbiology , Phylogeny , Presbytini/microbiology , RNA, Ribosomal, 16S/genetics , Species Specificity , Sphingobacterium/classification , Sphingobacterium/genetics
8.
Nano Lett ; 20(7): 5435-5442, 2020 07 08.
Article in English | MEDLINE | ID: mdl-32491862

ABSTRACT

High-performance lithium-ion batteries (LIBs) demand efficient and selective transport of lithium ions. Inspired by ion channels in biology systems, lithium-ion channels are constructed by chemically modifying the nanoporous channels of metal-organic frameworks (MOFs) with negatively charged sulfonate groups. Analogous to the biological ion channels, such pendant anionic moieties repel free anions while allowing efficient transport of cations through the pore channels. Implementing such MOFs as an electrolyte membrane doubly enhances the lithium-ion transference number, alleviates concentration polarization, and affords striking durability of high-rate LIBs. This work demonstrates an ion-selective material design that effectively tunes the ion-transport behavior and could assist with more efficient operation of LIBs.

9.
Pediatr Int ; 62(10): 1184-1188, 2020 Oct.
Article in English | MEDLINE | ID: mdl-32348602

ABSTRACT

BACKGROUND: Tracheobronchial foreign body (TFB) aspiration is a significant cause of respiratory problems in children. The timely diagnosis of TFB is important to decrease the mortality rate and the incidence of complications. Advances in radiology have led multi-slice spiral computed tomography (MSCT) to become the best technique for diagnosing TFB. METHODS: We performed a retrospective study over 5 years from July 2008 to June 2013. We collected information on children who were diagnosed with a TFB by bronchoscopy, and analyzed age, sex, location, type of foreign body, and various MSCT manifestations. RESULTS: A total of 382 children were included and 68.6% of them were aged 1 to <2 years. The majority (95.8%) of aspirated foreign bodies were vegetation items, and nearly half (47.6%) of them were peanut kernels, followed by sunflower seeds (26.2%). A total of 4.7% of TFBs were in the trachea, 51.0% were in the left main bronchus, and 44.2% were in the right main bronchus. Among the TFBs, 359 (95.5%) showed a high-density shadow in the tracheal / bronchial lumen using MSCT, which could establish the presence of a foreign body directly. Emphysema, localized obstruction and pneumonia were more commonly detected in the 7-21 days and ≥21 days group compared with those in the <7 days group (all P < 0.01). Bronchiectasis was found in two children who were diagnosed at least 21 days after aspiration. CONCLUSIONS: Multi-slice spiral computed tomography is very sensitive to TFBs. Timely diagnosis and treatment of TFB is important to prevent long-term sequelae in children.


Subject(s)
Bronchi/diagnostic imaging , Foreign Bodies/diagnostic imaging , Tomography, Spiral Computed/methods , Trachea/diagnostic imaging , Airway Obstruction/epidemiology , Bronchiectasis/epidemiology , Bronchoscopy/methods , Child , Child, Preschool , Female , Humans , Incidence , Infant , Male , Pneumonia/epidemiology , Pulmonary Emphysema/epidemiology , Retrospective Studies
10.
New Phytol ; 227(2): 498-512, 2020 07.
Article in English | MEDLINE | ID: mdl-32176820

ABSTRACT

Plant cell wall composition and structure can be modified as plants adapt to environmental stresses; however, the underlying regulatory mechanisms remain elusive. Here, we report that OsTMF, a homologue of the human TATA modulatory factor (TMF) in rice (Oryza sativa) and highly conserved in plants, negatively regulates cold tolerance through modification of cell wall properties. Cold stress increased the expression of OsTMF and accumulation of OsTMF in the nucleus, where OsTMF acts as a transcription activator and modulates the expression of genes involved in pectin degradation (OsBURP16), cellulose biosynthesis (OsCesA4 and OsCesA9), and cell wall structural maintenance (genes encoding proline-rich proteins and peroxidases). OsTMF directly activated the expression of OsBURP16, OsCesA4, and OsCesA9 through binding to the TATA cis-elements in their promoters. Under cold stress conditions, OsTMF negatively regulated pectin content and peroxidase activity and positively regulated cellulose content, causing corresponding alterations to cell wall properties, all of which collectively contribute to the negative effect of OsTMF on cold tolerance. Our findings unravel a previously unreported molecular mechanism of a conserved plant TMF protein in the regulation of cell wall changes under cold stress.


Subject(s)
Oryza , Cell Wall/metabolism , Cold Temperature , Gene Expression Regulation, Plant , Oryza/genetics , Oryza/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Plants, Genetically Modified/metabolism , Stress, Physiological/genetics
11.
Front Plant Sci ; 10: 982, 2019.
Article in English | MEDLINE | ID: mdl-31402926

ABSTRACT

Drought stress can cause huge crop production losses. Drought resistance consists of complex traits, and is regulated by arrays of unclear networks at the molecular level. A stress-responsive NAC transcription factor gene SNAC1 has been reported for its function in the positive regulation of drought resistance in rice, and several downstream SNAC1 targets have been identified. However, a complete regulatory network mediated by SNAC1 in drought response remains unknown. In this study, we performed Chromatin immunoprecipitation sequencing (ChIP-Seq) and RNA-Seq of SNAC1-overexpression transgenic rice (SNAC1-OE) lines and wild-type under normal and moderate drought stress conditions, to identify all SNAC1 target genes at a genome-wide scale by RNA-Seq analyses. We detected 980 differentially expressed genes (DEGs) in the SNAC1-OE lines compared to the wild-type control under drought stress conditions. By ChIP-Seq analyses, we identified 4,339 SNAC1-binding genes under drought stress conditions (SNAC1BGDs). By combining the DEGs and SNAC1BGDs, we identified 93 SNAC1-targeted genes involved in drought responses (SNAC1TGDs). Most SNAC1TGDs are involved in transcriptional regulation, response to water loss, and other processes related to stress responses. Moreover, the major motifs in the SNAC1BGDs promoters include a NAC recognition sequence (NACRS) and an ABA responsive element (ABRE). SNAC1-OE lines are more sensitive to ABA than wild-type. SNAC1 can bind to the OsbZIP23 promoter, an important ABA signaling regulator, and positively regulate the expression of several ABA signaling genes.

12.
Adv Mater ; 31(21): e1808338, 2019 May.
Article in English | MEDLINE | ID: mdl-30957302

ABSTRACT

Novel composite separators containing metal-organic-framework (MOF) particles and poly(vinyl alcohol) are fabricated by the electrospinning process. The MOF particles containing opened metal sites can spontaneously adsorb anions while allowing effective transport of lithium ions in the electrolyte, leading to dramatically improved lithium-ion transference number tLi + (up to 0.79) and lithium-ion conductivity. Meanwhile, the incorporation of the MOF particles alleviates the decomposition of the electrolyte, enhances the electrode reaction kinetics, and reduces the interface resistance between the electrolyte and the electrodes. Implementation of such composite separators in conventional lithium-ion batteries leads to significantly improved rate capability and cycling durability, offering a new prospective toward high-performance lithium-ion batteries.

13.
Chem Sci ; 10(42): 9859-9864, 2019 Nov 14.
Article in English | MEDLINE | ID: mdl-32015809

ABSTRACT

Extensive efforts have been devoted to developing efficient and durable catalysts for water oxidation. Herein, we report a highly stable metal-organic framework that shows high catalytic activity and durability for electrically driven (an overpotential of 430 mV at 10 mA cm-2 in neutral aqueous solution) and photodriven (a turnover frequency of 16 s-1 and 12 000 cycles) water oxidation, representing the best catalyst for water oxidation reported to date. Computational simulation and isotope tracing experiments showed that the µ4-OH group of the {Co8(µ4-OH)6} unit participates in the water oxidation reaction to offer an oxygen vacancy site with near-optimal OH- adsorption energy.

14.
Mol Plant ; 12(2): 263-277, 2019 02 04.
Article in English | MEDLINE | ID: mdl-30578854

ABSTRACT

Histone H2B monoubiquitination (H2Bub1) plays important roles in several physiological and developmental processes, but its roles in the regulation of plant stress responses remain elusive. Here, we report that H2Bub1 is crucially involved in abscisic acid (ABA) signaling and drought response in rice. We found that rice HISTONE MONOUBIQUITINATION2 (OsHUB2), an E3 ligase for H2Bub1, interacted with OsbZIP46, a key transcription factor regulating ABA signaling and drought response in rice. Genetic analyses suggest that OsHUB2, upregulated by drought and ABA, positively modulates ABA sensitivity and drought resistance. The H2Bub1 levels were increased in the target genes of OsbZIP46 under the drought stress and ABA treatments, which were positively correlated with their increased expression levels. Interestingly, MODD, a reported suppressor of ABA signaling and drought resistance by mediating OsbZIP46 deactivation and degradation, could reduce the H2Bub1 levels in the target genes of OsbZIP46 by recruiting a putative deubiquitinase OsOTLD1. Suppression of OsOTLD1 in vivo resulted in increased H2Bub1 levels and expression of OsbZIP46 target genes. Collectively, these findings established an elaborate mechanism of histone monoubiquitination in the fine-turning of ABA signaling and drought response by balancing H2Bub1 deposition and removal.


Subject(s)
Abscisic Acid/metabolism , Droughts , Histones/metabolism , Oryza/cytology , Oryza/metabolism , Signal Transduction , Ubiquitination , Gene Expression Regulation, Plant , Oryza/genetics , Oryza/physiology , Plant Proteins/metabolism , Stress, Physiological
15.
Opt Lett ; 43(3): 523-526, 2018 Feb 01.
Article in English | MEDLINE | ID: mdl-29400831

ABSTRACT

The nonlinear optical (NLO) properties of graphene-TiO2 nanoparticle (GNP) composite and graphene-TiO2 nanowire composite (GNW) are investigated by spatial self-phase modulation (SSPM) and Z-scan. The SSPM results of the GNP and GNW show that they possess strong self-diffraction effects at 1100 nm and no signal at 700 nm, which is different from all previous reports of other two-dimensional materials. A possible mechanism is that NLO behaviors are dominated by TiO2 at the visible wavelength, while by graphene at a near-infrared wavelength. The Z-scan results of the GNP and GNW show reverse saturable absorption (RSA) at 700 nm, but saturable absorption (SA) at 1100 nm. Our results demonstrate that, by choosing appropriate coupling, we could design two-dimensional materials that have specific NLO properties at particular wavelengths.

16.
J Am Chem Soc ; 140(1): 38-41, 2018 01 10.
Article in English | MEDLINE | ID: mdl-29258308

ABSTRACT

Converting CO2 into fuels via photochemical reactions relies on highly efficient and selective catalysts. We demonstrate that the catalytic active metal center can cooperate with neighboring hydroxide ligands to boost the photocatalytic CO2 reduction. Six cobalt-based metal-organic frameworks (MOFs) with different coordination environments are studied at the same reaction condition (photosensitizer, electron donor, water/organic mixed solvent, and visible light). In pure CO2 at 1.0 atm, the MOFs bearing µ-OH- ligands neighboring the open Co centers showed CO selectivities and turnover frequencies (TOFs) up to 98.2% and 0.059 s-1, respectively. More importantly, their TOFs reduced only ca. 20% when the CO2 partial pressure was reduced to 0.1 atm, while other MOFs reduced by at least 90%. Periodic density functional theory calculations and isotope tracing experiments showed that the µ-OH- ligands serve not only as strong hydrogen-bonding donors to stabilize the initial Co-CO2 adduct but also local proton sources to facilitate the C-O bond breaking.

17.
J BUON ; 22(1): 94-101, 2017.
Article in English | MEDLINE | ID: mdl-28365941

ABSTRACT

PURPOSE: To explore the chemoprotective effect of umbelliferone (UF) on prostate cancer cell lines, i.e. primary stage (LnCap) and last stage (PC3) prostate cancer together with the effect on the induction of apoptosis and alteration on cell cycle arrest. METHODS: Various concentrations of UF were evaluated against the different prostate cancer cell lines. Lipopolysaccharide (LPS) induced cytokines related factor profiling, proinflammatory cytokines, and inflammatory mediators were studied using Western blot analysis. RESULTS: UF showed significant apoptotic effect. Moreover, treatment with UF did not show apoptosis or cell cycle arrest on the non-cancerous cells including BHP-1, suggesting a selective tumor cell specific effect. UF treatment also enhanced the expression of Bax in PC3 cells, but had no significant effect on the activation of nuclear factor κB (NF-κB). Thus, the apoptosis induction was independent of NF-κB activation. CONCLUSION: The results of the present investigation confirmed the chemoprotective effect of UF in early-stage (Ln- Cap) and late-stage (PC3) prostate cancer cells.


Subject(s)
Anticarcinogenic Agents/pharmacology , Umbelliferones/pharmacology , Apoptosis/drug effects , Cell Cycle Checkpoints/drug effects , Cell Line, Tumor , Humans , Male , NF-kappa B/physiology , bcl-2-Associated X Protein/analysis
18.
Nat Commun ; 8: 14651, 2017 03 03.
Article in English | MEDLINE | ID: mdl-28256530

ABSTRACT

Transposable elements constitute a substantial portion of eukaryotic genomes and contribute to genomic variation, function, and evolution. Miniature inverted-repeat transposable elements (MITEs), as DNA transposons, are widely distributed in plant and animal genomes. Previous studies have suggested that retrotransposons act as translational regulators; however, it remains unknown how host mRNAs are influenced by DNA transposons. Here we report a translational repression mechanism mediated by a stowaway-like MITE (sMITE) embedded in the 3'-untranslated region (3'-UTR) of Ghd2, a member of the CCT (CONSTANS [CO], CO-LIKE and TIMING OF CAB1) gene family in rice. Ghd2 regulates important agronomic traits, including grain number, plant height and heading date. Interestingly, the translational repression of Ghd2 by the sMITE mainly relies on Dicer-like 3a (OsDCL3a). Furthermore, other MITEs in the 3'-UTRs of different rice genes exhibit a similar effect on translational repression, thus suggesting that MITEs may exert a general regulatory function at the translational level.


Subject(s)
3' Untranslated Regions/genetics , DNA Transposable Elements/genetics , Gene Expression Regulation, Plant , Inverted Repeat Sequences/genetics , Plant Proteins/genetics , Protein Biosynthesis , Base Sequence , Flowers/genetics , Flowers/metabolism , Gene Expression Profiling , Mutagenesis, Insertional , Oryza/genetics , Oryza/metabolism , Plant Proteins/metabolism , Plants, Genetically Modified
19.
PLoS Genet ; 13(2): e1006642, 2017 02.
Article in English | MEDLINE | ID: mdl-28234896

ABSTRACT

The transition from vegetative to reproductive growth is a critical process in the life cycle of higher plants. Previously, we cloned Rice Indeterminate 1 (RID1), which acts as the master switch for the transition from the vegetative to reproductive phase in rice. Although the photoperiod pathway of RID1 inducing expression of the florigen genes Hd3a and RFT1 via Ehd1 has been established, the alternative pathways for the essential flowering transition need to be further examined. Here, we identified a Suppressor of rid1 (SID1), which rescues the never-flowering phenotype of rid1. SID1 encodes an INDETERMINATE DOMAIN (IDD) transcription factor. Mutation in SID1 showed the delayed flowering phenotype. Gain-of-function of SID1, OsIDD1, or OsIDD6 could restore the rid1 to flowering. Further analyses showed SID1 and RID1 directly target the promoter regions of Hd3a and RFT1, two florigen genes in rice. Taken together, our results reveal an autonomous flowering pathway might be mediated by RID1, thereby controlling the phase transition from vegetative to reproductive development in rice.


Subject(s)
Florigen/metabolism , Flowers/genetics , Gene Expression Regulation, Plant , Oryza/genetics , Plant Proteins/genetics , Transcription Factors/genetics , Base Sequence , Flowers/metabolism , Flowers/radiation effects , Mutation , Oryza/metabolism , Oryza/radiation effects , Phenotype , Photoperiod , Plant Proteins/metabolism , Promoter Regions, Genetic/genetics , Protein Binding , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction/genetics , Signal Transduction/radiation effects , Time Factors , Transcription Factors/metabolism
20.
J Am Chem Soc ; 139(5): 1778-1781, 2017 02 08.
Article in English | MEDLINE | ID: mdl-28112923

ABSTRACT

The paddle-wheel type cluster Co2(RCOO)4(LT)2 (R = substituent group, LT = terminal ligand), possessing unusual metal coordination geometry compared with other cobalt compounds, may display high catalytic activity but is highly unstable especially in water. Here, we show that with judicious considerations of the host/guest geometries and modular synthetic strategies, the labile dicobalt clusters can be immobilized and stabilized in a metal-organic framework (MOF) as coordinative guests. The Fe(na)4(LT) fragment in the MOF [{Fe3(µ3-O)(bdc)3}4{Fe(na)4(LT)}3] (H2bdc = 1,4-benzenedicaboxylic acid, Hna = nicotinic acid) can be removed to give [{Fe3(µ3-O)(bdc)3}4] with a unique framework connectivity possessing suitable distribution of open metal sites for binding the dicobalt cluster in the form of Co2(na)4(LT)2. After two-step, single-crystal to single-crystal, postsynthetic modifications, a thermal-, water-, and alkaline-stable MOF [{Fe3(µ3-O)(bdc)3}4{Co2(na)4(LT)2}3] containing the desired dicobalt cluster was obtained, giving extraordinarily high electrocatalytic oxygen evolution activity in water at pH = 13 with overpotential as low as 225 mV at 10.0 mA cm-2.

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