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1.
Comput Med Imaging Graph ; 33(2): 140-7, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19095408

ABSTRACT

The paper presents a versatile nonlinear diffusion method to visually enhance the angiogram images for improving the clinical diagnosis. Traditional nonlinear diffusion has been shown very effective in edge-preserved smoothing of images. However, the existing nonlinear diffusion models suffer several drawbacks: sensitivity to the choice of the conductance parameter, limited range of edge enhancement, and the sensitivity to the selection of evolution time. The new anisotropic diffusion we proposed is based on facet model which can solve the issues mentioned above adaptively according to the image content. This method uses facet model for fitting the image to reduce noise, and uses the sum square of eigenvalues of Hessian as the standard of the conductance parameter selection synchronously. The capability of dealing with noise and conductance parameter can also change adaptively in the whole diffusion process. Moreover, our method is not sensitive to the choice of evolution time. Experimental results show that our new method is more effective than the original anisotropic diffusion.


Subject(s)
Angiography/methods , Artifacts , Models, Structural , Radiographic Image Enhancement/methods , Signal Processing, Computer-Assisted , Anisotropy , Coronary Vessels/anatomy & histology , Energy Transfer , Fuzzy Logic , Humans , Nonlinear Dynamics , Pattern Recognition, Automated/methods , Regression Analysis , Sensitivity and Specificity
2.
Article in English | MEDLINE | ID: mdl-19642265

ABSTRACT

This paper presents an original Quantum Genetic algorithm for Multiple sequence ALIGNment (QGMALIGN) that combines a genetic algorithm and a quantum algorithm. A quantum probabilistic coding is designed for representing the multiple sequence alignment. A quantum rotation gate as a mutation operator is used to guide the quantum state evolution. Six genetic operators are designed on the coding basis to improve the solution during the evolutionary process. The features of implicit parallelism and state superposition in quantum mechanics and the global search capability of the genetic algorithm are exploited to get efficient computation. A set of well known test cases from BAliBASE2.0 is used as reference to evaluate the efficiency of the QGMALIGN optimization. The QGMALIGN results have been compared with the most popular methods (CLUSTALX, SAGA, DIALIGN, SB_PIMA, and QGMALIGN) results. The QGMALIGN results show that QGMALIGN performs well on the presenting biological data. The addition of genetic operators to the quantum algorithm lowers the cost of overall running time.


Subject(s)
Algorithms , Artificial Intelligence , Models, Genetic , Pattern Recognition, Automated/methods , Sequence Alignment/methods , Sequence Analysis/methods , Computer Simulation , Data Interpretation, Statistical
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