Algebraic Statistics of Poincaré Recurrences in a DNA Molecule.

The statistics of Poincaré recurrences is studied for the base-pair breathing dynamics of an all-atom DNA molecule in a realistic aqueous environment with thousands of degrees of freedom. It is found that at least over five decades in time the decay of recurrences is described by an algebraic law with the Poincaré exponent close to ß=1.2. This value is directly related to the correlation decay exponent ν=ß-1, which is close to ν≈0.15 observed in the time resolved Stokes shift experiments. By applying the virial theorem we analyze the chaotic dynamics in polynomial potentials and demonstrate analytically that an exponent ß=1.2 is obtained assuming the dominance of dipole-dipole interactions in the relevant DNA dynamics. Molecular dynamics simulations also reveal the presence of strong low frequency noise with the exponent η=1.6. We trace parallels with the chaotic dynamics of symplectic maps with a few degrees of freedom characterized by the Poincaré exponent ß~1.5.

Symmetry breaking for ratchet transport in the presence of interactions and a magnetic field.

We study the microwave induced ratchet transport of two-dimensional electrons on an oriented semidisk Galton board. The magnetic field symmetries of ratchet transport are analyzed in the presence of electron-electron interactions. Our results show that a magnetic field asymmetric ratchet current can appear due to two contributions, a Hall drift of the rectified current that depends only weakly on electron-electron interactions and a breaking of the time reversal symmetry due to the combined effects of interactions and magnetic field. In the latter case, the asymmetry between positive and negative magnetic fields vanishes in the weak interaction limit. We also discuss the recent experimental results on ratchet transport in asymmetric nanostructures.

Poincaré recurrences of DNA sequences.

We analyze the statistical properties of Poincaré recurrences of Homo sapiens, mammalian, and other DNA sequences taken from the Ensembl Genome data base with up to 15 billion base pairs. We show that the probability of Poincaré recurrences decays in an algebraic way with the Poincaré exponent ß≈4 even if the oscillatory dependence is well pronounced. The correlations between recurrences decay with an exponent ν≈0.6 that leads to an anomalous superdiffusive walk. However, for Homo sapiens sequences, with the largest available statistics, the diffusion coefficient converges to a finite value on distances larger than one million base pairs. We argue that the approach based on Poncaré recurrences determines new proximity features between different species and sheds a new light on their evolution history.

Quantum vacuum of strongly nonlinear lattices.

We study the properties of classical and quantum strongly nonlinear chains by means of extensive numerical simulations. Due to strong nonlinearity, the classical dynamics of such chains remains chaotic at arbitrarily low energies. We show that the collective excitations of classical chains are described by sound waves whose decay rate scales algebraically with the wave number with a generic exponent value. The properties of the quantum chains are studied by the quantum Monte Carlo method and it is found that the low-energy excitations are well described by effective phonon modes with the sound velocity dependent on an effective Planck constant. Our results show that at low energies the quantum effects lead to a suppression of chaos and drive the system to a quasi-integrable regime of effective phonon modes.

Google matrix, dynamical attractors, and Ulam networks.

We study the properties of the Google matrix generated by a coarse-grained Perron-Frobenius operator of the Chirikov typical map with dissipation. The finite-size matrix approximant of this operator is constructed by the Ulam method. This method applied to the simple dynamical model generates directed Ulam networks with approximate scale-free scaling and characteristics being in certain features similar to those of the world wide web with approximate scale-free degree distributions as well as two characteristics similar to the web: a power-law decay in PageRank that mirrors the decay of PageRank on the world wide web and a sensitivity to the value alpha in PageRank. The simple dynamical attractors play here the role of popular websites with a strong concentration of PageRank. A variation in the Google parameter alpha or other parameters of the dynamical map can drive the PageRank of the Google matrix to a delocalized phase with a strange attractor where the Google search becomes inefficient.

Google matrix and Ulam networks of intermittency maps.

We study the properties of the Google matrix of an Ulam network generated by intermittency maps. This network is created by the Ulam method which gives a matrix approximant for the Perron-Frobenius operator of dynamical map. The spectral properties of eigenvalues and eigenvectors of this matrix are analyzed. We show that the PageRank of the system is characterized by a power law decay with the exponent beta dependent on map parameters and the Google damping factor alpha . Under certain conditions the PageRank is completely delocalized so that the Google search in such a situation becomes inefficient.

Poincaré recurrences in Hamiltonian systems with a few degrees of freedom.

Hundred twenty years after the fundamental work of Poincaré, the statistics of Poincaré recurrences in Hamiltonian systems with a few degrees of freedom is studied by numerical simulations. The obtained results show that in a regime, where the measure of stability islands is significant, the decay of recurrences is characterized by a power law at asymptotically large times. The exponent of this decay is found to be ß≈1.3. This value is smaller compared to the average exponent ß≈1.5 found previously for two-dimensional symplectic maps with divided phase space. On the basis of previous and present results a conjecture is put forward that, in a generic case with a finite measure of stability islands, the Poincaré exponent has a universal average value ß≈1.3 being independent of number of degrees of freedom and chaos parameter. The detailed mechanisms of this slow algebraic decay are still to be determined. Poincaré recurrences in DNA are also discussed.

Chaotic dynamics of a Bose-Einstein condensate coupled to a qubit.

We study numerically the coupling between a qubit and a Bose-Einstein condensate (BEC) moving in a kicked optical lattice using Gross-Pitaevskii equation. In the regime where the BEC size is smaller than the lattice period, the chaotic dynamics of the BEC is effectively controlled by the qubit state. The feedback effects of the nonlinear chaotic BEC dynamics preserve the coherence and purity of the qubit in the regime of strong BEC nonlinearity. This gives an example of an exponentially sensitive control over a macroscopic state by internal qubit states. At weak nonlinearity quantum chaos leads to rapid dynamical decoherence of the qubit. The realization of such coupled systems is within reach of current experimental techniques.

Ratchet transport of interacting particles.

We study analytically and numerically the ratchet transport of interacting particles induced by a monochromatic driving in asymmetric two-dimensional structures. The ratchet flow is preserved in the limit of strong interactions and can become even stronger compared to the noninteracting case. The developed kinetic theory gives a good description of these two limiting regimes. The numerical data show emergence of turbulence in the ratchet flow under certain conditions.

Time reversal of Bose-Einstein condensates.

Using Gross-Pitaevskii equation, we study the time reversibility of Bose-Einstein condensates (BEC) in kicked optical lattices, showing that in the regime of quantum chaos, the dynamics can be inverted from explosion to collapse. The accuracy of time reversal decreases with the increase of atom interactions in BEC, until it is completely lost. Surprisingly, quantum chaos helps to restore time reversibility. These predictions can be tested with existing experimental setups.

Fractal Weyl law for quantum fractal eigenstates.

The properties of the resonant Gamow states are studied numerically in the semiclassical limit for the quantum Chirikov standard map with absorption. It is shown that the number of such states is described by the fractal Weyl law, and their Husimi distributions closely follow the strange repeller set formed by classical orbits nonescaping in future times. For large matrices the distribution of escape rates converges to a fixed shape profile characterized by a spectral gap related to the classical escape rate.

Cooling by time reversal of atomic matter waves.

We propose an experimental scheme which allows us to realized approximate time reversal of matter waves for ultracold atoms in the regime of quantum chaos. We show that a significant fraction of the atoms return back to their original state, being at the same time cooled down by several orders of magnitude. We give a theoretical description of this effect supported by extensive numerical simulations. The proposed scheme can be implemented with existing experimental setups.

Destruction of Anderson localization by a weak nonlinearity.

We study numerically the spreading of an initially localized wave packet in a one-dimensional discrete nonlinear Schrödinger lattice with disorder. We demonstrate that above a certain critical strength of nonlinearity the Anderson localization is destroyed and an unlimited subdiffusive spreading of the field along the lattice occurs. The second moment grows with time proportional, variant t alpha, with the exponent alpha being in the range 0.3-0.4. For small nonlinearities the distribution remains localized in a way similar to the linear case.

Synchronization and bistability of a qubit coupled to a driven dissipative oscillator.

We study numerically the behavior of a qubit coupled to a quantum dissipative driven oscillator (resonator). Above a critical coupling strength the qubit rotations become synchronized with the oscillator phase. In the synchronized regime, at certain parameters, the qubit exhibits tunneling between two orientations with a macroscopic change of the number of photons in the resonator. The lifetimes in these metastable states can be enormously large. The synchronization leads to a drastic change of qubit radiation spectrum with the appearance of narrow lines corresponding to recently observed single artificial-atom lasing [O. Astafiev, Nature (London) 449, 588 (2007)].

Suppression of quantum chaos in a quantum computer hardware.

We present numerical and analytical studies of a quantum computer proposed by the Yamamoto group in Phys. Rev. Lett. 89, 017901 (2002). The stable and quantum chaos regimes in the quantum computer hardware are identified as a function of magnetic field gradient and dipole-dipole couplings between qubits on a square lattice. It is shown that a strong magnetic field gradient leads to suppression of quantum chaos.

Quantum computing of delocalization in small-world networks.

We study a quantum small-world network with disorder and show that the system exhibits a delocalization transition. A quantum algorithm is built up which simulates the evolution operator of the model in a polynomial number of gates for an exponential number of vertices in the network. The total computational gain is shown to depend on the parameters of the network and a larger than quadratic speedup can be reached. We also investigate the robustness of the algorithm in presence of imperfections.

Quantum computation and analysis of Wigner and Husimi functions: toward a quantum image treatment.

We study the efficiency of quantum algorithms which aim at obtaining phase-space distribution functions of quantum systems. Wigner and Husimi functions are considered. Different quantum algorithms are envisioned to build these functions, and compared with the classical computation. Different procedures to extract more efficiently information from the final wave function of these algorithms are studied, including coarse-grained measurements, amplitude amplification, and measure of wavelet-transformed wave function. The algorithms are analyzed and numerically tested on a complex quantum system showing different behavior depending on parameters: namely, the kicked rotator. The results for the Wigner function show in particular that the use of the quantum wavelet transform gives a polynomial gain over classical computation. For the Husimi distribution, the gain is much larger than for the Wigner function and is larger with the help of amplitude amplification and wavelet transforms. We discuss the generalization of these results to the simulation of other quantum systems. We also apply the same set of techniques to the analysis of real images. The results show that the use of the quantum wavelet transform allows one to lower dramatically the number of measurements needed, but at the cost of a large loss of information.

Nonequilibrium stationary states with ratchet effect.

An ensemble of particles in thermal equilibrium at temperature T, modeled by Nosè-Hoover dynamics, moves on a triangular lattice of oriented semidisk elastic scatterers. Despite the scatterer asymmetry, a directed transport is clearly ruled out by the second law of thermodynamics. Introduction of a polarized zero mean monochromatic field creates a directed stationary flow with nontrivial dependence on temperature and field parameters. We give a theoretical estimate of directed current induced by a microwave field in an antidot superlattice in semiconductor heterostructures.

Dynamical localization and repeated measurements in a quantum computation process.

We study numerically the effects of measurements on dynamical localization in the kicked rotator model simulated on a quantum computer. Contrary to the previous studies, which showed that measurements induce a diffusive probability spreading, our results demonstrate that localization can be preserved for repeated single-qubit measurements. We detect a transition from a localized to a delocalized phase, depending on the system parameters and on the choice of the measured qubit.

Imperfection effects for multiple applications of the quantum wavelet transform.

We study analytically and numerically the effects of various imperfections in a quantum computation of a simple dynamical model based on the quantum wavelet transform. The results for fidelity time scales, obtained for a large range of error amplitudes and number of qubits, imply that for static imperfections the threshold for fault-tolerant quantum computation is decreased by a few orders of magnitude compared to the case of random errors.