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J Protein Chem ; 13(3): 307-13, 1994 Apr.
Article in English | MEDLINE | ID: mdl-7945793

ABSTRACT

The conformation of bilirubin oxidase (EC 1.3.3.5) from Myrothecium verrucaria was studied by circular dichroism (CD). The far-UV CD spectrum showed a single minimum at 215 nm and a maximum near 198 nm, suggesting the dominance of beta-sheets. There was another negative band at 187 nm that is absent from the spectra of model alpha-helix or beta-sheet. CD analysis by the method of Chang et al. agreed well with the estimates based on the Chou and Fasman sequence-predictive method, but the Provencher-Glöckner method of CD analysis agreed well with the sequence-predictive method of Garnier et al. At pH 12 the 215- and 187-nm bands completely disappeared and the protein was denatured. This denaturation was accompanied by the appearance of a large positive band at 250 nm, probably due to ionization of tyrosine residues. In 20 mM sodium dodecyl sulfate the magnitude of the 215-nm band increased, but the spectrum transformed to that of partial helices after heating at 100 degrees C. In 6 M guanidine hydrochloride the far-UV CD spectrum was monotonic and became more negative at the lower wavelength limit (near 212 nm), suggesting that the secondary structure of the protein was disrupted. However, the near-UV CD spectrum retained residual aromatic bands even after heating at 100 degrees C. Thus, our denaturation studies suggest that bilirubin oxidase has a rigid tertiary structure.


Subject(s)
Oxidoreductases Acting on CH-CH Group Donors , Oxidoreductases/chemistry , Amino Acid Sequence , Circular Dichroism , Guanidine , Guanidines , Hydrogen-Ion Concentration , Molecular Sequence Data , Protein Conformation , Protein Denaturation , Protein Structure, Secondary , Sequence Analysis/methods , Sodium Dodecyl Sulfate , Solutions , Spectrophotometry, Ultraviolet
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