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1.
Biocontrol Sci ; 27(3): 117-130, 2022.
Article in English | MEDLINE | ID: mdl-36216563

ABSTRACT

Purpureocillium lilacinum has been recently found to contaminate a 20% (200,000 µg/mL) aqueous solution of polyhexamethylene biguanide hydrochloride (PHMB) . We aimed to elucidate the mechanism underlying the resistance of P. lilacinum to PHMB. First, we induced the PHMB-resistant (IR) strains IFM 67050 (IR) and IFM 65838 (IR) from the type strain P. lilacinum CBS 284.36T via cultivation in a medium containing high concentrations of PHMB. We then analyzed the DNA sequences via Illumina sequencing to evaluate the presence of genetic mutations in IFM 65838 (IR) . Further, we established an IFM 65838 (IR) uridine/uracil auxotrophic strain, and using the orotidine-5'-decarboxylase gene, pyrG as a selection marker, we tried to knockout a mutant gene in IFM 65838 (IR) using the CRISPR-Cas9 genome-editing technique. The growth rates of IFM 67050 (IR) and IFM 65838 (IR) in medium containing PHMB increased, and the minimum inhibitory concentrations (MICs) against PHMB also increased. Based on the DNA sequence analysis, we found a nonsynonymous point mutation in the gene PLI-008146 (G779A) in IFM 67050 (IR) and IFM 65838 (IR) . This point mutation leads to site combinations of splicing changes that cause partial sequences deletion (p.Y251_G281del) in the ΔPLI-008146 locus of IFM 65838 (IR) , and deletion sequences include partial adenosine/AMP deaminase motif (PF00962) orthologous to adenosine deaminase (ADA) (GeneBank: OAQ82383.1) . Furthermore, the mutant gene ΔPLI-008146 was successfully knocked out from the resistanceinduced strain using a novel CRISPR-Cas9 gene transformation method. A considerable reduction in growth rate and MIC against PHMB was observed in the absence of the mutant gene. Therefore, ADA may represent an important resistance factor in PHMB-resistant P. lilacinum.


Subject(s)
AMP Deaminase , Carboxy-Lyases , Adenosine , Adenosine Deaminase , Biguanides/pharmacology , Hypocreales , Uracil , Uridine
2.
Biocontrol Sci ; 26(3): 157-166, 2021.
Article in English | MEDLINE | ID: mdl-34556618

ABSTRACT

We isolated a fungus from a 20% (= 200,000 µg/mL) aqueous solution of polyhexamethylene biguanide hydrochloride (PHMB), a widely used antimicrobial and examined its morphology and drug resistance profile. Based on the sequence of the internal transcribed spacer region of ribosomal DNA, the fungus was identified as Purpureocillium lilacinum. Although the P. lilacinum type and resistant strains showed similar morphology, the latter had extremely low PHMB susceptibility and was able to grow in 20% aqueous solution of PHMB, which eliminated the type strain. The minimum inhibitory concentration (MIC) of PHMB for the resistant strain was significantly higher than that of the type strain and other pathogenic filamentous fungi and yeasts. The susceptibility to antimicrobial agents and antifungal agents other than PHMB was similar to that of the type strain, therefore the drug resistance of the isolate was specific to PHMB. Furthermore, we sequenced the genome of the isolate to predict PHMB resistance-related genes. Despite its high resistance to PHMB, no well-known genes homologous to fungal PHMB-resistant genes were detected in the genome of the resistant strain. In summary, P. lilacinum was found to be significantly more resistant to PHMB than previously reported, via an unidentified mechanism of drug resistance.


Subject(s)
Biguanides , Fungi , Biguanides/pharmacology , Hypocreales , Microbial Sensitivity Tests
3.
Biocontrol Sci ; 25(4): 203-213, 2020.
Article in English | MEDLINE | ID: mdl-33281178

ABSTRACT

Processes from spore germination to outgrowth were observed in detail using scanning electron microscopy (SEM) and transmission electron microscopy (TEM) for Bacillus cereus and Bacillus subtilis. At 15 and 30 min after germination induction, SEM observation and SEM-EDX analysis of Bacillus spores prepared by freeze substitution showed that spherical structures including compounds having the same elemental ratio as that of the spore were observed on the surface of the spores. The results suggested the leakages of the cellular materials from the spores. At 360 min, B. cereus spores in outgrowth phase elongated with hemispherical structures at the end of the long side of the cells. The discoid structures with a hole (20-30 nm diameter) in the center was observed at 360 min. Confocal laser scanning microscopy after staining with fluorescence-labeled anti-spore antibodies showed that the hemispherical and discoid structures originated from the spore coat. These structures broke down after detached from the cells in outgrowth phase.


Subject(s)
Bacillus cereus/growth & development , Bacillus cereus/ultrastructure , Bacillus subtilis/growth & development , Bacillus subtilis/ultrastructure , Spores, Bacterial/growth & development , Spores, Bacterial/ultrastructure , Bacterial Physiological Phenomena
4.
J Microbiol Methods ; 137: 6-13, 2017 06.
Article in English | MEDLINE | ID: mdl-28347725

ABSTRACT

Catechins are major polyphenolic compounds of green tea. To investigate mechanism for antibacterial action of catechins, 11 monoclonal antibodies (MAbs) were raised against a 3-succinyl-epicatechin (EC)-keyhole limpet hemocyanin (KLH) conjugate. Amino acid sequences of variable regions determined for MAbs b-1058, b-1565, and b-2106 confirmed their innovative character. MAb b-1058 strongly interacted with its target substances in the following order of magnitude: theaflavin-3,3'-di-O-gallate (TFDG)>theaflavin-3-O-gallate (TF3G)≥theaflavin-3'-O-gallate (TF3'G)>gallocatechin gallate (GCg)>penta-O-galloyl-ß-d-glucose (PGG)>epigallocatechin gallate (EGCg), as determined using surface plasmon resonance (SPR) on MAb-immobilized sensor chips. The affinity profiles of MAbs b-1058 and b-2106 to the various polyphenols tested suggested that flavan skeletons with both carbonyl oxygen and hydroxyl groups are important for this interaction to take place. S. aureus cells treated with EGCg showed green fluorescence around the cells after incubation with FITC-labeled MAb b-1058. The fluorescence intensity increased with increasing concentrations of EGCg. These MAbs are effective to investigate antibacterial mechanism of catechins and theaflavins.


Subject(s)
Anti-Bacterial Agents/immunology , Anti-Bacterial Agents/pharmacology , Antibodies, Monoclonal/chemistry , Antibodies, Monoclonal/immunology , Catechin/immunology , Catechin/pharmacology , Amino Acid Sequence , Animals , Antibodies, Monoclonal/isolation & purification , Antibody Specificity , Base Sequence , Cell Line , Escherichia coli/drug effects , Hemocyanins/immunology , Mice, Inbred BALB C , Polyphenols/chemistry , Staphylococcus aureus/drug effects
5.
Biosci Biotechnol Biochem ; 79(5): 845-54, 2015.
Article in English | MEDLINE | ID: mdl-25559894

ABSTRACT

Catechins are a class of polyphenols and have high anti-bacterial activity against various microorganisms. Here, we report the mechanism for antibacterial activity of epigallocatechin gallate (EGCg) against Gram-positive bacteria Bacillus subtilis, which is highly sensitive to EGCg. Transmission electron microscope analysis revealed that deposits containing EGCg were found throughout the cell envelope from the outermost surface to the outer surface of cytoplasmic membrane. Aggregating forms of proteins and EGCg were identified as spots that disappeared or showed markedly decreased intensity after the treatment with EGCg compared to the control by two-dimensional electrophoresis. Among the identified proteins included 4 cell surface proteins, such as oligopeptide ABC transporter binding lipoprotein, glucose phosphotransferase system transporter protein, phosphate ABC transporter substrate-binding protein, and penicillin-binding protein 5. Observations of glucose uptake of cells and cell shape B. subtilis after the treatment with EGCg suggested that EGCg inhibits the major functions of these proteins, leading to growth inhibition of B. subtilis.


Subject(s)
Anti-Bacterial Agents/pharmacology , Bacillus subtilis/drug effects , Bacterial Proteins/metabolism , Catechin/analogs & derivatives , Amino Acid Sequence , Bacillus subtilis/metabolism , Bacillus subtilis/physiology , Bacterial Proteins/antagonists & inhibitors , Bacterial Proteins/chemistry , Carrier Proteins/chemistry , Carrier Proteins/metabolism , Catechin/chemistry , Catechin/metabolism , Catechin/pharmacology , Electrophoresis, Gel, Two-Dimensional , Electrophoresis, Polyacrylamide Gel , Glucose/metabolism , Lipoproteins/chemistry , Lipoproteins/metabolism , Molecular Docking Simulation , Molecular Sequence Data , Oxygen/metabolism , Spores, Bacterial/drug effects
6.
J Microbiol Methods ; 86(1): 97-103, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21549162

ABSTRACT

We developed a novel method using indirect staining with cerium chloride for visualization of the catechin derivative epigallocatechin gallate (EGCg) on the surface of particles, i.e., polystyrene beads and bacterial cells, by electron microscopy. The staining method is based on the fact that in an alkaline environment, EGCg produces hydrogen peroxide, and then hydrogen peroxide reacts with cerium, resulting in a cerium hydroperoxide precipitate. This precipitate subsequently reacts with EGCg to produce larger deposits. The amount of precipitate is proportional to the amount of EGCg. Highly EGCg-sensitive Staphylococcus aureus and EGCg-resistant Escherichia coli were treated with EGCg under various pH conditions. Transmission electron microscopy observation showed that the amount of deposits on S. aureus increased with an increase in EGCg concentration. After treating bacterial cells with 0.5mg/mL EGCg (pH 6.0), attachment of EGCg was significantly lower to E. coli than to S. aureus. This is the first report that shows differences in affinity of EGCg to the cell surfaces of Gram-positive and -negative bacteria by electron microscopy.


Subject(s)
Catechin/analogs & derivatives , Cerium/chemistry , Coloring Agents/chemistry , Escherichia coli/chemistry , Staining and Labeling/methods , Staphylococcus aureus/chemistry , Catechin/chemistry , Escherichia coli/ultrastructure , Microscopy, Electron , Staining and Labeling/instrumentation , Staphylococcus aureus/ultrastructure
7.
Virology ; 328(1): 45-51, 2004 Oct 10.
Article in English | MEDLINE | ID: mdl-15380357

ABSTRACT

The dynamics of virus interference in Cucumber mosaic virus (CMV) infection in cowpea were investigated by tissue-blotting and in situ hybridization. Using co-inoculation assays, we discovered that spatial competition between CMV-LE (subgroup I) and CMV-m2 (subgroup II) occurred in the inoculated leaves. Interestingly, competitive interactions between the two viruses also could be observed in the non-inoculated upper leaf tissues of the plants. Furthermore, the pattern of exclusive distribution was observed between challenge and protecting viruses in the serially inoculated leaves. Taken together, it is suggested that the dynamics of competitive interactions between the two subgroups could be characterized by exclusive infection and multiplication of the individual viruses in cowpea plants.


Subject(s)
Cucumovirus/physiology , Pisum sativum/virology , Plant Diseases/virology , Viral Interference , Cucumovirus/genetics , Nucleic Acid Hybridization , Plant Leaves/virology , RNA, Viral/analysis
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