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1.
Food Control ; 79: 297-308, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28867876

ABSTRACT

The development of an efficient seafood traceability framework is crucial for the management of sustainable fisheries and the monitoring of potential substitution fraud across the food chain. Recent studies have shown the potential of DNA barcoding methods in this framework, with most of the efforts focusing on using mitochondrial targets such as the cytochrome oxidase 1 and cytochrome b genes. In this article, we show the identification of novel targets in the nuclear genome, and their associated primers, to be used for the efficient identification of flatfishes of the Pleuronectidae family. In addition, different in silico methods are described to generate a dataset of barcode reference sequences from the ever-growing wealth of publicly available sequence information, replacing, where possible, labour-intensive laboratory work. The short amplicon lengths render the analysis of these new barcode target regions ideally suited to next-generation sequencing techniques, allowing characterisation of multiple fish species in mixed and processed samples. Their location in the nucleus also improves currently used methods by allowing the identification of hybrid individuals.

2.
PLoS One ; 7(8): e41440, 2012.
Article in English | MEDLINE | ID: mdl-22870222

ABSTRACT

BACKGROUND: Leishmaniasis is a major health problem that affects more than 12 million people. Treatment presents several problems, including high toxicity and many adverse effects, leading to the discontinuation of treatment and emergence of resistant strains. METHODOLOGY/PRINCIPAL FINDINGS: We evaluated the in vitro antileishmanial activity of benzaldehyde thiosemicarbazone derived from limonene complexed with copper, termed BenzCo, against Leishmania amazonensis. BenzCo inhibited the growth of the promastigote and axenic amastigote forms, with IC(50) concentrations of 3.8 and 9.5 µM, respectively, with 72 h of incubation. Intracellular amastigotes were inhibited by the compound, with an IC(50) of 10.7 µM. BenzCo altered the shape, size, and ultrastructure of the parasites. Mitochondrial membrane depolarization was observed in protozoa treated with BenzCo but caused no alterations in the plasma membrane. Additionally, BenzCo induced lipoperoxidation and the production of mitochondrial superoxide anion radicals in promastigotes and axenic amastigotes of Leishmania amazonensis. CONCLUSION/SIGNIFICANCE: Our studies indicated that the antileishmania activity of BenzCo might be associated with mitochondrial dysfunction and oxidative damage, leading to parasite death.


Subject(s)
Antiprotozoal Agents/pharmacology , Benzaldehydes/pharmacology , Copper/metabolism , Leishmania/metabolism , Leishmaniasis/drug therapy , Mitochondria/metabolism , Thiosemicarbazones/pharmacology , Animals , Antiprotozoal Agents/chemical synthesis , Antiprotozoal Agents/chemistry , Benzaldehydes/chemical synthesis , Benzaldehydes/chemistry , Humans , Leishmaniasis/metabolism , Lipid Peroxidation/drug effects , Macrophages, Peritoneal/parasitology , Membrane Potential, Mitochondrial/drug effects , Mice , Mice, Inbred BALB C , Mitochondrial Membranes/metabolism , Oxidation-Reduction/drug effects , Superoxides/metabolism , Thiosemicarbazones/chemical synthesis , Thiosemicarbazones/chemistry
3.
Acta amaz ; 40(3): 585-590, set. 2010. ilus, tab
Article in Portuguese | LILACS, VETINDEX | ID: lil-560530

ABSTRACT

Duas populações naturais de Anopheles darlingi foram analisadas quanto aos padrões de variabilidade genética relacionados ao comportamento hematofágico, cujas coletas foram realizadas no intra, peri e extradomicíio, em dois municípios do Estado do Amazonas: Coari e Manaus. Os resultados evidenciaram amplo número de fragmentos polimórficos, bem como elevada variabilidade genética nessas populações. Na população de Coari, a porcentagem de locos polimórficos (P) e heterozigosidade (He) variou de 77,63% - 84,86% e 0,2851 0,3069, respectivamente, sendo a maior variabilidade genética detectada nas subpopulações do intradomicílio, e a menor nas do peridomicílio. A população de Manaus mostrou variabilidade genética similar a de Coari (P= 75% - 78,94% e He= 0,2732 0,2741), onde também foi detectada maior variabilidade genética no intradomicílio. Os dados de qui-quadrado (x²= 695,89; GL= 304; P < 0,001) e de F ST (F ST= 0,0775 ± 0,0072) foram significativos, indicando uma estruturação micro geográfica, decorrente de alguma redução no fluxo gênico. Esses resultados podem ser interpretados como sendo em resposta à pressão de seleção face aos inseticidas, que permanecem residuais nas paredes dos domicílios.


Two natural populations of Anopheles darlingi, collected in the intra, peri and extra domicile of two townships in the State of Amazonas, Coari and Manaus, were assayed as to their hematophagic behaviour-related genetic variability patterns. Findings revealed a large number of polymorphic fragments as well as high genetic variability in these populations. Polymorphic loci rate (P) and heterozygosity (He) in the Coari population varied between 77.63% - 84.86% and 0.2851 0.3069, respectively, with the highest and lowest genetic variability being detected in the intra- and peri-domicile sub-populations, respectively. The Manaus population showed genetic variability and heterozygosity similar to those in Coari (P= 75% - 78.94% and He= 0.2732 0.2741), where higher genetic variability was detected in the intra-domicile as well. Chi-square data (x²= 695.89; GL= 304; P < 0.001) and F ST (F ST= 0.0775 ± 0.0072) were significant, indicating micro-geographic structuring resulting from some decreased gene flow. These findings point out the selective pressure response to the residual insecticide remaining on household walls after the entire neighbourhood had been sprayed with it during malaria control programs.


Subject(s)
Genetic Variation , Anopheles/genetics , Random Amplified Polymorphic DNA Technique , Malaria
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