Enhancement of chlorhexidine activity against planktonic and biofilm forms of oral streptococci by two Croton spp. essential oils from the Caatinga biome.

This work investigates the ability of two Croton spp. essential oils (EO) to enhance chlorhexidine (CHX) activity against oral streptococci. EO's chemical composition of Croton argyrophyllus and C. pluriglandulosus was determined by GC-MS/FID. The microbial growth kinetics and minimum inhibitory concentration (MIC) of EOs and CHX were determined, followed by their synergism against S. mutans UA159 and ATCC 25175, S. salivarius ATCC 7073 and S. sp. ATCC 15300. The microplate-based method was used to determine the EO/CHX activity against 24-h-old biofilms. The major compounds were α-pinene (54.74%) and bicyclogermacrene (16.08%) for EOAr and 1,8-cineole (17.41%), methyleugenol (16.06%) and elemicin (15.99%) for EOPg. Both EO had MIC around 16,000 µg/mL. EOs/CHX presented a synergistic effect against most strains (FICi from 0.133 to 0.375), and OE/CHX-treated biofilms showed a reduction in biomass and cell viability compared to CHX, only (p < 0.01). Thus, the EOs works as natural adjuvants for CHX.

Recent Patents on the Industrial Application of Biosurfactants.

BACKGROUND: Biosurfactants are natural bioactive compounds produced from fungi, bacteria and plants. These molecules have several properties that enable them to be involved in various industrial applications. The surface-active properties of biosurfactants allow their use in various sectors, such as agriculture, health, cosmetics, bioremediation/ petroleum, mining, and bioprocess. OBJECTIVE: The objective of this study was to analyze the patents deposited in intellectual property databases for applications of biosurfactants in the areas of agriculture, health, cosmetics, bioremediation/petroleum, mining, and bioprocesses, with the research period consisting of the last six years. METHODS: This study targeted the use of biosurfactants in various industrial sectors. The patent search was carried out using the Google Patents platform, a platform that is commonly used for this purpose and freely accessible. RESULTS: During the search for patents related to applications of biosurfactants in industry filed in the last 6 years, results were found to be distributed in the following areas: agriculture (70), cosmetics (2311), bioremediation/petroleum (179), health (1794), mining (5), and bioprocess (133). Six patents were selected from each area, except for health and mining, for which the search resulted in only 5 and 4 patents, respectively, to be discussed and provide information on the biotechnological applications of biosurfactants in the industry. CONCLUSION: The present study showed a wide area of application of biosurfactants in industry. The interest in the inclusion of biosurfactants in the industry is directly related to the need for more sustainable solutions to solve real market problems. The cosmetics sector presented the most patents that employ the use of biosurfactants.

An Integrative View of the Phyllosphere Mycobiome of Native Rubber Trees in the Brazilian Amazon.

The rubber tree, Hevea brasiliensis, is a neotropical Amazonian species. Despite its high economic value and fungi associated with native individuals, in its original area in Brazil, it has been scarcely investigated and only using culture-dependent methods. Herein, we integrated in silico approaches with novel field/experimental approaches and a case study of shotgun metagenomics and small RNA metatranscriptomics of an adult individual. Scientific literature, host fungus, and DNA databases are biased to fungal taxa, and are mainly related to rubber tree diseases and in non-native ecosystems. Metabarcoding retrieved specific phyllospheric core fungal communities of all individuals, adults, plantlets, and leaves of the same plant, unravelling hierarchical structured core mycobiomes. Basidiomycotan yeast-like fungi that display the potential to produce antifungal compounds and a complex of non-invasive ectophytic parasites (Sooty Blotch and Flyspeck fungi) co-occurred in all samples, encompassing the strictest core mycobiome. The case study of the same adult tree (previously studied using culture-dependent approach) analyzed by amplicon, shotgun metagenomics, and small RNA transcriptomics revealed a high relative abundance of insect parasite-pathogens, anaerobic fungi and a high expression of Trichoderma (a fungal genus long reported as dominant in healthy wild rubber trees), respectively. Altogether, our study unravels new and intriguing information/hypotheses of the foliar mycobiome of native H. brasiliensis, which may also occur in other native Amazonian trees.

Hybrid Assembly Improves Genome Quality and Completeness of Trametes villosa CCMB561 and Reveals a Huge Potential for Lignocellulose Breakdown.

Trametes villosa is a wood-decaying fungus with great potential to be used in the bioconversion of agro-industrial residues and to obtain high-value-added products, such as biofuels. Nonetheless, the lack of high-quality genomic data hampers studies investigating genetic mechanisms and metabolic pathways in T. villosa, hindering its application in industry. Herein, applying a hybrid assembly pipeline using short reads (Illumina HiSeq) and long reads (Oxford Nanopore MinION), we obtained a high-quality genome for the T. villosa CCMB561 and investigated its genetic potential for lignocellulose breakdown. The new genome possesses 143 contigs, N50 of 1,009,271 bp, a total length of 46,748,415 bp, 14,540 protein-coding genes, 22 secondary metabolite gene clusters, and 426 genes encoding Carbohydrate-Active enzymes. Our CAZome annotation and comparative genomic analyses of nine Trametes spp. genomes revealed T. villosa CCMB561 as the species with the highest number of genes encoding lignin-modifying enzymes and a wide array of genes encoding proteins for the breakdown of cellulose, hemicellulose, and pectin. These results bring to light the potential of this isolate to be applied in the bioconversion of lignocellulose and will support future studies on the expression, regulation, and evolution of genes, proteins, and metabolic pathways regarding the bioconversion of lignocellulosic residues.

Exploration of stem endophytic communities revealed developmental stage as one of the drivers of fungal endophytic community assemblages in two Amazonian hardwood genera.

Many aspects of the dynamics of tropical fungal endophyte communities are poorly known, including the influence of host taxonomy, host life stage, host defence, and host geographical distance on community assembly and composition. Recent fungal endophyte research has focused on Hevea brasiliensis due to its global importance as the main source of natural rubber. However, almost no data exist on the fungal community harboured within other Hevea species or its sister genus Micrandra. In this study, we expanded sampling to include four additional Hevea spp. and two Micrandra spp., as well as two host developmental stages. Through culture-dependent and -independent (metagenomic) approaches, a total of 381 seedlings and 144 adults distributed across three remote areas within the Peruvian Amazon were sampled. Results from both sampling methodologies indicate that host developmental stage had a greater influence in community assemblage than host taxonomy or locality. Based on FunGuild ecological guild assignments, saprotrophic and mycotrophic endophytes were more frequent in adults, while plant pathogens were dominant in seedlings. Trichoderma was the most abundant genus recovered from adult trees while Diaporthe prevailed in seedlings. Potential explanations for that disparity of abundance are discussed in relation to plant physiological traits and community ecology hypotheses.

Weed interference factors that affect the growth of an atlantic forest tree species / Fatores da matointerferência determinantes no crescimento de espécie arbórea da mata atlântica

The objective of this study was to assess the possible existence of allelopathy and competition for water and nutrients of the grass Urochloa brizantha (Hochst. ex A. Rich.) Stapf cv. Marandu grown together with Schinus terebinthifolius Raddi in a greenhouse. The experimental design was completely randomized in a factorial scheme with 3 factors and the following levels: (1) one individual of the forest species with and without the presence of U. brizantha at a density of 4 individuals per pot; (2) supply of nutrients in limiting or non-limiting dose; and (3) supply of a limiting or non-limiting amount of water. We measured the height and root collar diameter of the tree seedlings, as well as the shoot and root dry weights of both species. There was competition by the grass with the tree species. The coexistence reduced the height by 30.5 cm, the root collar diameter by 1.58 mm and the shoot and root dry weights by 22.7 g and 9.5 g, respectively, of S. terebinthifolius. The greater supply of water in the pots increased the height by 18.9 cm of the S. terebinthifolius seedlings compared to the plants grown with limited water supply. Evidence was also observed of competition for nutrients, principally at the largest nutrient addition level, where the presence of the grass caused an additional decrease in the root collar diameter and shoot dry weight of the tree species, while the shoot and root dry weights of the grass increased. The results did not allow evaluating the existence of allelopathy of U. brizantha on S. terebinthifolius.

O objetivo deste estudo foi avaliar a magnitude da competição por água, nutrientes e alelopatia imposta pelo capim Urochloa brizantha (Hochst. ex A. Rich.) Stapf cv. Marandu em convivência com Schinus terebinthifolius Raddi, em casa de vegetação. O delineamento experimental foi inteiramente casualizado, em esquema fatorial completo, com 3 fatores e os seguintes níveis: (1) um indivíduo da espécie florestal na ausência ou presença de U. brizantha, plantada na densidade 4 indivíduos por vaso; (2) fornecimento de nutrientes em dose limitante ou não-limitante e (3) o fornecimento de água sob regime limitante ou não-limitante. Foram mensuradas a altura e o diâmetro do coleto das mudas, bem como a massa seca da parte aérea e radicular das espécies. Houve competição da gramínea sobre a espécie arbórea. O convívio reduziu em 30,5 cm a altura, em 1,58 mm o diâmetro do coleto e em 22,7 g e 9,5 g as massas secas da parte aérea e das raízes de S. terebinthifolius, respectivamente. O maior fornecimento de água nos vasos proporcionou crescimento em altura 18,9 cm maior nas plantas de S. terebinthifolius quando comparado às plantas com fornecimento limitado de água. Houve também evidência de competição por nutrientes, principalmente quando houve a maior adição de nutrientes, causando um decréscimo adicional no diâmetro do coleto e na massa seca da parte aérea da espécie arbórea, enquanto que a gramínea foi favorecida com aumentos nas massas secas de parte aérea e radicular. O estudo não possibilitou avaliar a existência de alelopatia de U. brizantha sobre S. terebinthifolius.