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Arch Microbiol ; 202(8): 2329-2336, 2020 Oct.
Article in English | MEDLINE | ID: mdl-32529508

ABSTRACT

Matrix-Assisted Laser Desorption Ionization Time-Of-Flight Mass Spectrometry (MALDI-TOF MS) is a rapid, cost-effective and high-throughput method for bacteria characterization. However, most previous studies focused on clinical isolates. In this study, we evaluated the use of MALDI-TOF MS as a rapid screening tool for marine bacterial symbionts. A set of 255 isolates from different marine sources (corals, sponge, fish and seawater) was analyzed using cell lysates to obtain a rapid grouping. Cluster analysis of mass spectra and 16S rRNA showed 18 groups, including Vibrio, Bacillus, Pseudovibrio, Alteromonas and Ruegeria. MALDI-TOF distance similarity scores ≥ 60% and ≥ 70% correspond to ≥ 98.7% 16S rRNA gene sequence similarity and ≥ 95% pyrH gene sequence similarity, respectively. MALDI-TOF MS is a useful tool for Vibrio species groups' identification.


Subject(s)
Environmental Microbiology , Marine Biology/methods , Seawater/microbiology , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Vibrio/classification , RNA, Ribosomal, 16S/genetics , Symbiosis , Vibrio/chemistry , Vibrio/genetics
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