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1.
Cureus ; 14(10): e30946, 2022 Oct.
Article in English | MEDLINE | ID: mdl-36465777

ABSTRACT

Ewing's sarcoma is an aggressive primary malignant bone tumor that affects long and flat bones and is commonly seen in children and adolescents. The involvement of the foot especially the talus is an extremely rare entity with less than 15 cases reported in the literature. The rarity and atypical symptoms often lead to delays in diagnosis affecting the prognosis and survival. We present a 14-year-old female with pain and swelling of the left ankle for 18 months. She was being treated previously for an ankle sprain and was later suspected of avascular necrosis of the talus, before presenting to us. Clinicoradiology-pathological workup confirmed the diagnosis of Ewing sarcoma of the talus. Further, the metastatic workup revealed multiple skeletal metastases at the time of diagnosis. The metastatic lesion of the right femur required prophylactic fixation, otherwise, the patient was treated with palliative chemotherapy and radiotherapy. Ewing's sarcoma of the foot involving the talus is extremely rare and is a commonly misdiagnosed entity, affecting the overall prognosis of the patient. A high index of suspicion and a multidisciplinary approach is imperative for its early diagnosis and definitive management.

2.
Methods Mol Biol ; 2408: 109-115, 2022.
Article in English | MEDLINE | ID: mdl-35325419

ABSTRACT

Sorghum [Sorghum bicolor (L.) Moench.] is a versatile crop, grown in 30 countries and a food source for nearly 500 million people globally. Although the sorghum genome is sequenced, a limited understanding of gene function prevents the improvement of resistance against almost 150 species of viruses, bacteria, fungus, and parasitic plants to improve productivity. Here, we present a Brome mosaic virus (BMV)-based virus-induced gene silencing (VIGS) to silence target genes for functional study in sorghum. This protocol achieves 100% sorghum infection with BMV by growing the plants at 18 °C instead of 22 °C. Using this method, one can achieve gene silencing in sorghum up to 100% of the inoculated plants.


Subject(s)
Bromovirus , Sorghum , Edible Grain , Gene Silencing , Humans , Software , Sorghum/genetics
3.
SA J Radiol ; 25(1): 1973, 2021.
Article in English | MEDLINE | ID: mdl-33824739

ABSTRACT

Synovial plicae are normal remnants of synovial membranes within the knee joint cavity and are usually asymptomatic. Pathological infrapatellar plica, which is mostly due to plica injury, may be a potential cause of anterior knee pain, but is often overlooked and under-reported on magnetic resonance imaging (MRI). This pictorial review illustrates the MRI findings of infrapatellar plica injury and associated knee injuries, with emphasis on its differentiation from the mimics of plica injury.

4.
Phys Chem Chem Phys ; 22(47): 27861-27872, 2020 Dec 16.
Article in English | MEDLINE | ID: mdl-33284302

ABSTRACT

This work reports a systematic study of the evolution of charge transport properties in granular ultra-thin films of palladium of thicknesses varying between 6 nm and 2 nm. While the films with thickness >4 nm exhibit metallic behaviour, that at 3 nm thickness undergoes a metal-insulator transition at 19.5 K. In contrast, the 2 nm thick film remained insulating at all temperatures, with transport following Mott's variable range hopping. At room temperature, while the thicker films exhibit resistance decrease upon H2 exposure, the insulating film showed an anomalous initial resistance increase before switching to a subsequent decrease. The nanostructure dependent transport and the ensuing H2 response is modeled on a percolation model, which also explores the relevance of film thickness as a macroscopic control parameter to engineer the desired system response in granular metal films.

6.
J Family Med Prim Care ; 9(4): 2056-2060, 2020 Apr.
Article in English | MEDLINE | ID: mdl-32670965

ABSTRACT

BACKGROUND: Leonardo de Vinci contributed several observations and drawings on facial proportion and the lower one third of the face. Many facial and body measurements to determine vertical dimension at occlusion. These facial measurements can be implemented in construction of complete denture patients. AIM: This study aims to correlate the vertical dimension at occlusion to 13 anthropometric measurements. Then correlating, which measurement is more accurate to the vertical dimension at occlusion. METHODOLOGY: 20 male and female subjects were selected. Vertical dimension at occlusion and 12 anthropometric parameters were measured. RESULTS AND CONCLUSION: Twice the length of the eye and distance between the tip of the thumb and tip of the index finger is closest to the vertical dimension at occlusion in male patients and that vertical distance from the pupil to corner of the mouth, vertical height of the ear is closest to the vertical dimension at occlusion in female patients.

7.
Cureus ; 12(12): e11838, 2020 Dec 02.
Article in English | MEDLINE | ID: mdl-33409078

ABSTRACT

The critical biomechanical importance of talus and nonspecific clinical features of talus lesion warrants a meticulous diagnostic work-up for specific management, particularly when the talus lesion is associated with concomitant soft tissue and joint abnormalities. We present a rare case of osteoblastoma of talus with concomitant tenosynovitis of tibialis anterior, ankle joint effusion, varicose vein and moderate distal arterial stenosis.

8.
Indian J Radiol Imaging ; 30(4): 448-452, 2020.
Article in English | MEDLINE | ID: mdl-33737773

ABSTRACT

BACKGROUND: Iliolumbar syndrome is a frequent cause of chronic nonspecific low back pain. The cornerstone of its treatment lies upon the specific diagnosis of the iliolumbar syndrome. The ultrasound guided interventions have the potential for the specific diagnosis and treatment of the iliolumbar syndrome. OBJECTIVE: To assess the role of ultrasound-guided intervention for the diagnosis and treatment of the iliolumbar syndrome. MATERIALS AND METHODS: The study comprised of fifty-seven patients of nonspecific low back pain with the clinically suspected iliolumbar syndrome. Two-staged ultrasound-guided interventions were performed: Primary diagnostic and secondary therapeutic interventions. Favorable response after the injection of local anesthetic agent in iliolumbar ligament (defined as VAS score to ≥3) was classified as confirmed Ilio-lumbar syndrome. Clinico radiological efficacy after platelet-rich plasma (PRP) injection in confirmed iliolumbar syndrome patients was done. RESULTS: Out of 57 patients, 45 (78.95%) were diagnosed with confirmed Iliolumbar syndrome after primary diagnostic intervention. The mean value of VAS at presentation was 8.02 ± 0.72 which was decreased to 3.16 ± 1.63; P < 0.0001. All 45 patients underwent PRP injection in iliolumbar ligament and 42 patients (93.33%) showed reduction in mean VAS score from 8 ± 0.67 (at presentation) to 0.89 ± 1.23 after 6 weeks follow up; P < 0.0001. Iliolumbar ligament thickness was decreased from the day of presentation (2.66 ± 0.22) to 6 weeks after therapeutic intervention (0.91 ± 0.42); P < 0.0001. CONCLUSION: The ultrasound guided diagnostic and therapeutic intervention were found to result in a specific diagnosis and remarkable recovery in the iliolumbar syndrome group of nonspecific low back pain patients.

9.
PLoS Biol ; 16(12): e2005956, 2018 12.
Article in English | MEDLINE | ID: mdl-30540739

ABSTRACT

Plant protein kinases form redundant signaling pathways to perceive microbial pathogens and activate immunity. Bacterial pathogens repress cellular immune responses by secreting effectors, some of which bind and inhibit multiple host kinases. To understand how broadly bacterial effectors may bind protein kinases and the function of these kinase interactors, we first tested kinase-effector (K-E) interactions using the Pseudomonas syringae pv. tomato-tomato pathosystem. We tested interactions between five individual effectors (HopAI1, AvrPto, HopA1, HopM1, and HopAF1) and 279 tomato kinases in tomato cells. Over half of the tested kinases interacted with at least one effector, and 48% of these kinases interacted with more than three effectors, suggesting a role in the defense. Next, we characterized the role of select multi-effector-interacting kinases and revealed their roles in basal resistance, effector-triggered immunity (ETI), or programmed cell death (PCD). The immune function of several of these kinases was only detectable in the presence of effectors, suggesting that these kinases are critical when particular cell functions are perturbed or that their role is typically masked. To visualize the kinase networks underlying the cellular responses, we derived signal-specific networks. A comparison of the networks revealed a limited overlap between ETI and basal immunity networks. In addition, the basal immune network complexity increased when exposed to some of the effectors. The networks were used to successfully predict the role of a new set of kinases in basal immunity. Our work indicates the complexity of the larger kinase-based defense network and demonstrates how virulence- and avirulence-associated bacterial effectors alter sectors of the defense network.


Subject(s)
Protein Kinases/physiology , Solanum lycopersicum/immunology , Virulence Factors/immunology , Bacterial Proteins/metabolism , Host-Pathogen Interactions , Solanum lycopersicum/genetics , Plant Diseases/microbiology , Plant Immunity/physiology , Plant Proteins/metabolism , Protein Kinases/immunology , Pseudomonas syringae/pathogenicity , Signal Transduction , Virulence
10.
Indian J Pediatr ; 83(2): 172-4, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26452493

ABSTRACT

There is paucity of knowledge about the immunogenicity of vaccines in infants who have been exposed to HIV in-utero but have remained uninfected. The authors studied the immunogenicity of 3 doses of recombinant hepatitis B vaccine at 6,10,14 wk of age in HIV exposed but uninfected (HEU) infants. After 3 mo of last dose of the vaccine, out of 26 infants, 23 (89.5 %) infants were found to be responders (Anti HBs IgG titres ≥ 10 mIU/ml) and 3 (11.5 %) babies remained non responders (Anti HBs IgG titres < 10 mIU/ml). The proportion of babies who were non responders were higher when compared to similar studies done on unexposed and uninfected infants, suggesting a poorer immunogenicity of hepatitis B vaccine in these infants.


Subject(s)
HIV Infections/immunology , Hepatitis B Vaccines/administration & dosage , Hepatitis B , Pregnancy Complications, Infectious/immunology , Adaptive Immunity/drug effects , Adaptive Immunity/immunology , Female , HIV Seronegativity/immunology , Hepatitis B/immunology , Hepatitis B/prevention & control , Hepatitis B Vaccines/immunology , Humans , India , Infant , Pregnancy , Prospective Studies , Statistics as Topic
11.
Genome Biol ; 15(1): 301, 2014 Jan 15.
Article in English | MEDLINE | ID: mdl-24423368

ABSTRACT

A Report on the Plant Genomes & Biotechnology: From Genes to Networks meeting, held at the Cold Spring Harbor Laboratories, USA, December 4-7, 2013.


Subject(s)
Biotechnology/methods , Databases, Genetic , Genome, Plant , Genomics/methods , Congresses as Topic
12.
Indian J Pediatr ; 81(8): 805-7, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24271875

ABSTRACT

The authors studied the outcome of 108 infants < 6 mo with severe acute malnutrition (SAM) admitted in the Nutritional Rehabilitation Centres (NRC) at a teaching hospital. The most common symptom that the children presented with, was acute diarrhoea (35.2 %) followed by failure to gain weight (26.9 %). Seventy five (69.4 %) infants were cured after nutritional rehabilitation and 29 (26.8 %) were non responders. Fifty two (48 %) infants showed good weight gain after proper counseling or supplementary suckling technique alone.


Subject(s)
Infant Nutrition Disorders/rehabilitation , Acute Disease , Humans , Infant , Weight Gain
13.
Mol Plant Microbe Interact ; 27(1): 7-17, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24047240

ABSTRACT

Protein kinase-driven phosphorylation constitutes the core of cellular signaling. Kinase components of signal transduction pathways are often targeted for inactivation by pathogens. The study of kinases and immune signal transduction in the model crop tomato (Solanum lycopersicum) would benefit from the availability of community-wide resources for large scale and systems-level experimentation. Here, we defined the tomato kinome and performed a comprehensive comparative analysis of the tomato kinome and 15 other plant species. We constructed a tomato kinase library (TOKN 1.0) of over 300 full-length open reading frames (ORF) cloned into a recombination-based vector. We developed a high-throughput pipeline to isolate and transform tomato protoplasts. A subset of the TOKN 1.0 library kinases were expressed in planta, were purified, and were used to generate a functional tomato protein microarray. All resources created were utilized to test known and novel associations between tomato kinases and Pseudomonas syringae DC3000 effectors in a large-scale format. Bsk7 was identified as a component of the plant immune response and a candidate effector target. These resources will enable comprehensive investigations of signaling pathways and host-pathogen interactions in tomato and other Solanaceae spp.


Subject(s)
Plant Diseases/immunology , Protein Kinases/metabolism , Pseudomonas syringae/metabolism , Signal Transduction , Solanaceae/physiology , Solanum lycopersicum/physiology , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Computational Biology , Gene Library , Genetic Complementation Test , Host-Pathogen Interactions , Luciferases , Solanum lycopersicum/enzymology , Solanum lycopersicum/genetics , Solanum lycopersicum/immunology , Open Reading Frames , Plant Diseases/microbiology , Plant Immunity , Plant Proteins/genetics , Plant Proteins/metabolism , Protein Array Analysis , Protein Kinases/genetics , Protoplasts , Pseudomonas syringae/genetics , Solanaceae/enzymology , Solanaceae/genetics , Solanaceae/immunology
14.
PLoS One ; 7(10): e47547, 2012.
Article in English | MEDLINE | ID: mdl-23077632

ABSTRACT

Fibrillin4 (FBN4) is a protein component of plastoglobules, which are antioxidant-rich sub-compartments attached to the chloroplast thylakoid membranes. FBN4 is required for normal plant biotic and abiotic stress resistance, including bacterial pathogens, herbicide, high light intensity, and ozone; FBN4 is also required for the accumulation of osmiophilic material inside plastoglobules. In this study, the contribution of FBN4 to plastoglobule lipid composition was examined using cultivated apple trees in which FBN4 gene expression was knocked down using RNA interference. Chloroplasts and plastoglobules were isolated from leaves of wild-type and fbn4 knock-down trees. Total lipids were extracted from chloroplasts and plastoglobules separately, and analyzed using liquid chromatography-mass spectrometry (LC-MS). Three lipids were consistently present at lower levels in the plastoglobules from fbn4 knock-down apple leaves compared to the wild-type as determined by LC-MS multiple ion monitoring. One of these species had a molecular mass and fragmentation pattern that identified it as plastoquinone, a known major component of plastoglobules. The plastoquinone level in fbn4 knock-down plastoglobules was less than 10% of that in wild-type plastoglobules. In contrast, plastoquinone was present at similar levels in the lipid extracts of whole chloroplasts from leaves of wild-type and fbn4 knock-down trees. These results suggest that the partitioning of plastoquinone between the plastoglobules and the rest of the chloroplast is disrupted in fbn4 knock-down leaves. These results indicate that FBN4 is required for high-level accumulation of plastoquinone and some other lipids in the plastoglobule. The dramatic decrease in plastoquinone content in fbn4 knock-down plastoglobules is consistent with the decreased plastoglobule osmiophilicity previously described for fbn4 knock-down plastoglobules. Failure to accumulate the antioxidant plastoquinone in the fbn4 knock-down plastoglobules might contribute to the increased stress sensitivity of fbn4 knock-down trees.


Subject(s)
Gene Expression Regulation, Plant , Malus , Microfilament Proteins , Plastoquinone/metabolism , Antioxidants/metabolism , Chloroplasts/genetics , Chloroplasts/metabolism , Fibrillins , Malus/genetics , Malus/metabolism , Microfilament Proteins/genetics , Microfilament Proteins/metabolism , Photosynthesis/genetics , Plant Leaves/genetics , Plant Leaves/metabolism
15.
Trends Plant Sci ; 16(8): 432-41, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21571574

ABSTRACT

Fibrillins are nuclear-encoded, plastid proteins associated with chromoplast fibrils and chloroplast plastoglobules, thylakoids, photosynthetic antenna complexes, and stroma. There are 12 sub-families of fibrillins. However, only three of these sub-families have been characterized genetically or functionally. We review evidence indicating that fibrillins are involved in plastoglobule structural development, chromoplast pigment accumulation, hormonal responses, protection of the photosynthetic apparatus from photodamage, and plant resistance to a range of biotic and abiotic stresses. The area of fibrillin research has substantial growth potential and will contribute to better understanding of mechanisms of plant stress tolerance and plastid structure and function.


Subject(s)
Microfilament Proteins/metabolism , Plant Proteins/metabolism , Plastids/metabolism , Adaptation, Physiological , Fibrillins , Gene Expression/genetics , Microfilament Proteins/genetics , Photosynthesis , Phylogeny , Plant Proteins/genetics , Plastids/chemistry
16.
Plant Physiol ; 154(3): 1281-93, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20813909

ABSTRACT

The fibrillins are a large family of chloroplast proteins that have been linked with stress tolerance and disease resistance. FIBRILLIN4 (FIB4) is found associated with the photosystem II light-harvesting complex, thylakoids, and plastoglobules, which are chloroplast compartments rich in lipophilic antioxidants. For this study, FIB4 expression was knocked down in apple (Malus 3 domestica) using RNA interference. Plastoglobule osmiophilicity was decreased in fib4 knockdown (fib4 KD) tree chloroplasts compared with the wild type, while total plastoglobule number was unchanged. Compared with the wild type, net photosynthetic CO(2) fixation in fib4 KD trees was decreased at high light intensity but was increased at low light intensity. Furthermore, fib4 KD trees produced more anthocyanins than the wild type when transferred from low to high light intensity, indicating greater sensitivity to high light stress. Relative to the wild type, fib4 KD apples were more sensitive to methyl viologen and had higher superoxide levels during methyl viologen treatment. Arabidopsis (Arabidopsis thaliana) fib4 mutants and fib4 KD apples were more susceptible than their wild-type counterparts to the bacterial pathogens Pseudomonas syringae pathovar tomato and Erwinia amylovora, respectively, and were more sensitive to ozone-induced tissue damage. Following ozone stress, plastoglobule osmiophilicity decreased in wild-type apple and remained low in fib4 KD trees; total plastoglobule number increased in fib4 KD apples but not in the wild type. These results indicate that FIB4 is required for plastoglobule development and resistance to multiple stresses. This study suggests that FIB4 is involved in regulating plastoglobule content and that defective regulation of plastoglobule content leads to broad stress sensitivity and altered photosynthetic activity.


Subject(s)
Arabidopsis/genetics , Chloroplasts/physiology , Malus/genetics , Plant Proteins/metabolism , Arabidopsis/metabolism , Arabidopsis/physiology , Chloroplasts/ultrastructure , Erwinia amylovora , Gene Expression Regulation, Plant , Gene Knockdown Techniques , Light , Malus/metabolism , Malus/physiology , Ozone/pharmacology , Paraquat/pharmacology , Photosynthesis , Plant Diseases/genetics , Plant Proteins/genetics , Pseudomonas syringae , RNA Interference , RNA, Plant/genetics , Stress, Physiological
17.
Hum Mol Genet ; 18(18): 3470-83, 2009 Sep 15.
Article in English | MEDLINE | ID: mdl-19567405

ABSTRACT

RECQL4 is a human RecQ helicase which is mutated in approximately two-thirds of individuals with Rothmund-Thomson syndrome (RTS), a disease characterized at the cellular level by chromosomal instability. BLM and WRN are also human RecQ helicases, which are mutated in Bloom and Werner's syndrome, respectively, and associated with chromosomal instability as well as premature aging. Here we show that primary RTS and RECQL4 siRNA knockdown human fibroblasts accumulate more H(2)O(2)-induced DNA strand breaks than control cells, suggesting that RECQL4 may stimulate repair of H(2)O(2)-induced DNA damage. RTS primary fibroblasts also accumulate more XRCC1 foci than control cells in response to endogenous or induced oxidative stress and have a high basal level of endogenous formamidopyrimidines. In cells treated with H(2)O(2), RECQL4 co-localizes with APE1, and FEN1, key participants in base excision repair. Biochemical experiments indicate that RECQL4 specifically stimulates the apurinic endonuclease activity of APE1, the DNA strand displacement activity of DNA polymerase beta, and incision of a 1- or 10-nucleotide flap DNA substrate by Flap Endonuclease I. Additionally, RTS cells display an upregulation of BER pathway genes and fail to respond like normal cells to oxidative stress. The data herein support a model in which RECQL4 regulates both directly and indirectly base excision repair capacity.


Subject(s)
DNA Repair , RecQ Helicases/genetics , Biocatalysis , Cells, Cultured , DNA Damage , DNA Polymerase beta/metabolism , DNA-(Apurinic or Apyrimidinic Site) Lyase/metabolism , DNA-Binding Proteins/genetics , Guanine/analogs & derivatives , Guanine/metabolism , Humans , Hydrogen Peroxide/pharmacology , Oligonucleotide Array Sequence Analysis , Pyrimidines/metabolism , RNA, Small Interfering/genetics , RecQ Helicases/metabolism , Rothmund-Thomson Syndrome/genetics , Rothmund-Thomson Syndrome/metabolism , X-ray Repair Cross Complementing Protein 1
18.
Indian J Pediatr ; 73(10): 897-900, 2006 Oct.
Article in English | MEDLINE | ID: mdl-17090901

ABSTRACT

OBJECTIVE: The present study was conducted prospectively to determine i) the length of postnatal hospital stay of healthy newborns and determine the factors facilitating their early discharge (< 48 h) and ii) the frequency and causes of re-hospitalization following early discharge, in a tertiary care hospital. METHODS: Length of hospital stay was recorded for healthy newborns. Factors facilitating Early discharge were determined by both univariate and multivariate (multiple logistic regression) analyses. Of all newborns discharged within 48 h, every third case was called for a follow-up visit 72 hrs later and examined for any medical problem and need of re-hospitalization. RESULTS: A total of 1134 babies were enrolled, of which 861 (76.2%) were discharged at or before 48 hours. The overall mean (SD) length of hospital stay was 46.4 (45.8) h. Factors contributing to early discharge included vaginal delivery (RR: 30.2; 95% CI: 19.0, 47.9; P<0.001), absence of pre-existing maternal disease or obstetric complication (RR: 4.32; 95% CI: 2.27, 8.22; P < 0.001), and birth weight of > 2.5 kg (RR: 1.91; 95% CI: 1.27, 2.89; P = 0.002). Of the 280 neonates called for follow-up, 193 reported. Of these, 61 (31.6%) were normal. Neonatal jaundice was the most frequent problem seen in 105 (54.4%) children on follow-up. Only 16 (8.3%) newborns needed re-hospitalization; the most common indication being neonatal jaundice (n=9). CONCLUSION: Most of the children in our set-up are being discharged within 48 hrs. Early discharge is governed primarily by maternal indications. A follow-up visit after 72 hr is important to assess the need of re-hospitalization in healthy newborns discharged within 48 hrs of birth.


Subject(s)
Patient Discharge , Patient Readmission , Perinatal Care , Humans , India , Infant, Newborn , Length of Stay , Prospective Studies , Time Factors
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