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1.
Anal Bioanal Chem ; 414(6): 2131-2145, 2022 Mar.
Article in English | MEDLINE | ID: mdl-34988588

ABSTRACT

Fe3O4-brominated graphene (Fe3O4-GBR) nanocomposites were synthesized via an in situ method using the precursors FeSO4.7H2O and GBR in different (1:1, 1:2, 2:1, 1:5, 1:10, 1:20, and 5:1) weight ratios at pH 11.5. The Fe3O4-GBR (1:5) nanocomposite in combination with H2O2 and 3,3',5,5'-tetramethylbenzidine (TMB) showed swift and superior intrinsic peroxidase mimetic enzyme activity compared with the other Fe3O4-GBR composites, GBR and Fe3O4, as observed by colorimetry. It was characterized using high-resolution scanning electron microscopy (HRSEM), energy dispersive X-ray spectroscopy (EDX), Fourier transform infrared (FTIR) spectroscopy, powder X-ray diffraction (PXRD), and thermogravimetric analysis (TGA). Its catalytic activity was optimized by varying different parameters, and the optimum conditions for peroxidase mimetic activity were observed using 100 µL Fe3O4-GBR (1 mg/mL), 50 µL TMB (1 mg/mL), and 200 µL H2O2(1 mM) in 400 µL of acetate buffer of pH 2.3 at 30 °C temperature. Kinetic analysis has revealed the Michaelis-Menten kinetic behavior of peroxidase activity with Michaelis-Menten constants (Km) and maximum initial velocities (Vmax) of 0.082 mM and 14.1 nMs-1 respectively, for H2O2 and 0.086 mM and 5.1 nMs-1, respectively for TMB. The limit of detection and linear range were found to be 49.6 µM and 100-880 µM, respectively, for H2O2 and 41.9 µM and 47.6-952.3 µM, respectively, for cholesterol. On this basis, a simple, swift, sensitive, selective, and reproducible colorimetric assay to detect cholesterol levels in blood serum samples using Fe3O4-GBR nanocomposite has been developed. Thus, Fe3O4-GBR composite as compared to Fe3O4 and GBR has shown better peroxidase mimicking activity for biosensing.


Subject(s)
Graphite , Nanocomposites , Cholesterol , Colorimetry/methods , Ferrosoferric Oxide , Hydrogen Peroxide/chemistry , Kinetics , Nanocomposites/chemistry , Peroxidase/chemistry
2.
Analyst ; 144(11): 3620-3634, 2019 May 28.
Article in English | MEDLINE | ID: mdl-31070612

ABSTRACT

A novel, water-soluble, luminescent anthracene-bridged AA-type bi-arm poly(N-vinylpyrrolidone) (ATC-PNVP) was synthesized using a click reaction between alkyne-terminated PNVP and 9,10-bis(azidomethyl)anthracene. The resultant anthracene-bridged PNVP (ATC-PNVP) was characterized using 1H NMR, FTIR, UV-Vis, and fluorescence spectroscopic methods and GPC analysis. ATC-PNVP showed effective fluorescence properties in an aqueous medium. It showed highly selective "turn off" sensing behaviour towards picric acid, a common nitro-aromatic explosive, with a wide linear range of detection of 0.01-0.3 mM and LOD value of 0.006 mM in water. ATC-PNVP-based paper sensors also showed very effective detection of picric acid in the concentration range 0.001-1.0 mM. Its binding with bovine serum albumin (BSA) was studied using steady-state, synchronous and 3D fluorescence spectroscopy and this study showed effective quenching of the intrinsic fluorescence of BSA and occurrence of a FRET-type interaction. Furthermore, this luminescent ATC-PNVP was efficiently used as a fluorescence microscopy labelling agent in NIH-3T3 and HeLa cells, and showed greater uptake and hence better fluorescent labelling in the cytosols of the tested cells than free 9,10-bis(azidomethyl) anthracene. The cell viability study also showed a very good biocompatible and non-toxic nature of ATC-PNVP at lower working concentrations towards each of the types of cells tested.

3.
Environ Sci Pollut Res Int ; 26(19): 19155-19170, 2019 Jul.
Article in English | MEDLINE | ID: mdl-31020519

ABSTRACT

Elevated ozone (O3) pollution is observed every spring over the Northern Indian region including the Himalayan foothills, with a maximum typically in the month of May. However, studies investigating influences of photochemistry and dynamics in the valleys of Central Himalaya are limited. Here, in situ surface O3 observations conducted at Dehradun (77.99° E, 30.27° N, 600 m above mean sea level) in the Doon Valley during April-July 2018 are presented. These O3 observations reveal the prevalence of an urban environment over Dehradun with enhanced levels during noontime (66.4 ppbv ± 11.0 ppbv in May) and lower levels during night (26.7 ppbv ± 11.5 ppbv). Morning time O3 enhancement rate at Dehradun (7.5 ppbv h-1) is found to be comparable to that at Bode (7.3 ppbv h-1) in another valley of Himalayan foothills (Kathmandu), indicating stronger anthropogenic emissions in the Doon Valley as well. Daily average O3 at Dehradun varied in the range of 13.7-71.3 ppbv with hourly values reaching up to 103.1 ppbv during the study period. Besides the in situ photochemical O3 production, the entrainment of O3-rich air through boundary layer dynamics also contributes in noontime O3 enhancement in the Doon Valley. Monthly average O3 at Dehradun (49.3 ppbv ± 19.9 ppbv) is observed to be significantly higher than that over urban sites in Northern India (35-41 ppbv) and Bode (38.5 ppbv) in the Kathmandu Valley during May. O3 photochemical buildup, estimated to be 30.3 ppbv and 39.7 ppbv during April and May, respectively, is significantly lower in June (21.2 ppbv). Copernicus Atmosphere Monitoring Service (CAMS) model simulations successfully reproduce the observed variability in noontime O3 at Dehradun (r = 0.86); however, absolute O3 levels were typically overestimated. The positive relationship between CAMS O3 and CO (r = 0.65) together with an O3/CO slope of 0.16 is attributed to the influences of biomass burning besides anthropogenic emissions on observed O3 variations in the Doon Valley. O3 observations show an enhancement by 35-56% at Dehradun during a high-fire activity period in May 2018 as compared to a low-fire activity period over the Northern Indian region in agreement with the enhancement found in CAMS O3 fields (10-65%) over the region in the vicinity of Dehradun.


Subject(s)
Air Pollutants/analysis , Environmental Monitoring/methods , Ozone/analysis , Atmosphere , Fires , India , Seasons
4.
ACS Comb Sci ; 14(12): 680-7, 2012 Dec 10.
Article in English | MEDLINE | ID: mdl-23088677

ABSTRACT

Functional nucleic acids are DNA and RNA aptamers that bind targets, or they are deoxyribozymes and ribozymes that have catalytic activity. These functional DNA and RNA sequences can be identified from random-sequence pools by in vitro selection, which requires choosing the length of the random region. Shorter random regions allow more complete coverage of sequence space but may not permit the structural complexity necessary for binding or catalysis. In contrast, longer random regions are sampled incompletely but may allow adoption of more complicated structures that enable function. In this study, we systematically examined random region length (N(20) through N(60)) for two particular deoxyribozyme catalytic activities, DNA cleavage and tyrosine-RNA nucleopeptide linkage formation. For both activities, we previously identified deoxyribozymes using only N(40) regions. In the case of DNA cleavage, here we found that shorter N(20) and N(30) regions allowed robust catalytic function, either by DNA hydrolysis or by DNA deglycosylation and strand scission via ß-elimination, whereas longer N(50) and N(60) regions did not lead to catalytically active DNA sequences. Follow-up selections with N(20), N(30), and N(40) regions revealed an interesting interplay of metal ion cofactors and random region length. Separately, for Tyr-RNA linkage formation, N(30) and N(60) regions provided catalytically active sequences, whereas N(20) was unsuccessful, and the N(40) deoxyribozymes were functionally superior (in terms of rate and yield) to N(30) and N(60). Collectively, the results indicate that with future in vitro selection experiments for DNA and RNA catalysts, and by extension for aptamers, random region length should be an important experimental variable.


Subject(s)
Biocatalysis , DNA, Catalytic/metabolism , DNA/chemistry , DNA/metabolism , DNA Cleavage , DNA, Catalytic/chemistry , Hydrolysis , RNA/chemistry , RNA/metabolism , Tyrosine/chemistry , Tyrosine/metabolism
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