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1.
Semin Cancer Biol ; 70: 134-138, 2021 05.
Article in English | MEDLINE | ID: mdl-32569823

ABSTRACT

Kidney stone is a common urological condition, the prevalence and incidence of which has escalated in the last few years due to dietary habits and other related medical conditions such as obesity and diabetes mellitus. It is a chronic disease which leads to loss of kidney function(s) and nephrectomy. Chronic kidney stone disease has been shown to be associated with transitional cell carcinoma (TCC) or renal cell carcinoma (RCC) and kidney tumors have been found to be more frequent among patients with kidney stones. Although hyperoxaluria is mainly responsible for kidney stone formation, dysbiosis of the gut and urinary tract microbiome may in part contribute to kidney stone disease. Dysbiosis of the gut and urinary tract microbiome have been linked to kidney stone diseases with both gain and loss of function. The review provides a detailed study of how the variations in the microbiome of the human gut and urinary tract result in the chronic kidney stone diseases which are associated with increased papillary RCC risks.


Subject(s)
Carcinoma, Renal Cell/pathology , Dysbiosis/physiopathology , Kidney Calculi/complications , Kidney Neoplasms/pathology , Microbiota , Animals , Carcinoma, Renal Cell/etiology , Humans , Kidney Neoplasms/etiology , Risk Factors
2.
J Basic Microbiol ; 60(3): 253-267, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31750957

ABSTRACT

A new bacterial strain producing extracellular cholesterol oxidase (ChOx) was isolated and identified as Castellaniella sp. COX. The ChOx was purified by salting-out and ion-exchange chromatography up to 10.4-fold, with a specific activity of 15 U/mg with a molecular mass of 59 kDa. The purified ChOx exhibited pH 8.0 and temperature 40°C for its optimum activity. The enzyme showed stability over a wide pH range and was most stable at pH value 7.0, and at pH 8.0, it retained almost 86% of its initial activity after 3 h of incubation at 37°C. The enzyme possessed a half-life of 8 h at 37°C, 7 h at 40°C, and 3 h at 50°C. A Lineweaver-Burk plot was calibrated to determine its Km (0.16 mM) and Vmax (18.7 µmol·mg-1 ·min-1 ). The ChOx activity was enhanced with Ca2+ , Mg2+ , and Mn2+ while it was inhibited by Hg2+ , Ba2+ , Fe2+ , Cu2+ , and Zn2+ ions. Organic solvents like acetone, n-butanol, toluene, dimethyl sulfoxide, chloroform, benzene, and methanol were well tolerated by the enzyme while iso-propanol and ethanol were found to enhance the activity of purified ChOx. ChOx induced cytotoxicity with an IC50 value of 1.78 and 1.88 U/ml against human RD and U87MG established cell lines, respectively, while broadly sparing the normal human cells.


Subject(s)
Alcaligenaceae/enzymology , Bacterial Proteins/chemistry , Bacterial Proteins/pharmacology , Cholesterol Oxidase/chemistry , Cholesterol Oxidase/pharmacology , Alcaligenaceae/classification , Alcaligenaceae/genetics , Alcaligenaceae/isolation & purification , Bacterial Proteins/isolation & purification , Cations/chemistry , Cell Line , Cell Survival/drug effects , Cholesterol Oxidase/isolation & purification , Detergents/chemistry , Enzyme Stability , Humans , Hydrogen-Ion Concentration , Inhibitory Concentration 50 , Kinetics , Molecular Weight , Oxidation-Reduction , Solvents/chemistry , Temperature
3.
Prep Biochem Biotechnol ; 49(9): 916-926, 2019.
Article in English | MEDLINE | ID: mdl-31322478

ABSTRACT

A Gram-positive, rod-shaped, endospore-forming, and RNA-degrading bacterium RB-5 was isolated from a soil sample. Based on 16-rDNA gene sequence, the bacterium RB-5 was identified as Bacillus safensis (Accession number KX443714.1). The bacterium appeared to be related to Bacillus safensis KL-052, an other-member of genus Bacillus. One-factor-at-a-time (OFAT) and Response Surface Methodology (RSM) statistical approaches were used to optimize the fermentation broth to obtain an improved extracellular RNase production from B. safensis RB-5. These approaches improved RNase activity of B. safensis KL-052 from 4.26 to 7.85 U/mL. The OFAT approach was used to study the effects of supplementation of carbon, nitrogen and physical conditions, which included temperature, pH and agitation rate on extracellular RNase production by B. safensis KL-052. Five variables screened by Central Composite Design (CCD) were employed to evaluate their interactive effects on RNase production by the organism. CCD selected 25 factorial values obtained by the statistical approach were peptone 1.13% (w/v), sodium nitrate 1.13% (w/v), MgSO4 0.06% (w/v), pH 8.5, and temperature 35 °C for RNase production by B. safensis. The highest predicted value of RNase was 7.05 U/ml while actual obtained value was 7.85 U/ml that was ∼84% and 1.84-fold higher than OFAT approach.


Subject(s)
Bacillus/enzymology , Ribonucleases/metabolism , Bacillus/genetics , Bacillus/isolation & purification , Bacillus/metabolism , Carbon/metabolism , Fermentation , Hydrogen-Ion Concentration , Industrial Microbiology , Nitrogen/metabolism , Peptones/metabolism , Phylogeny , Ribonucleases/genetics , Soil Microbiology , Temperature
4.
Int J Biol Macromol ; 97: 440-446, 2017 Apr.
Article in English | MEDLINE | ID: mdl-28108407

ABSTRACT

Ribonucleases (RNases) catalyze the degradation of ribonucleic acid (RNA) into smaller nucleotides. RNases display angiogenic, neurotoxic, antitumor and immunosuppressive properties. In the present study, an extracellular RNase was successfully purified to homogeneity from a Bacillus sp. RNS3 (KX966412) by salting out at 0-50% ammonium sulphate saturation followed by the gel permeation (Sephadex G-100) chromatography. The multistep purification resulted in 10.4 fold purification of RNase with a yield of 3.12%. The activity of the purified RNase was found to be 2.02U/mg protein. The purified RNase was monomeric with a molecular weight of 66kDa. It exhibited Michalis-Menten kinetics parameters Kcat 7.92min-1 and Km 0.12mg/mL. The antiproliferative activity of the purified RNase was tested against an established Hep-2C (HeLa derived) cancer cell line in vitro. The purified RNase reduced the viability of the Hep-2C cells significantly with an IC50 value of 3.53µg/mL. The haemolytic activity of purified RNase was also evaluated and unfortunately, it showed a strong haemolytic activity towards human RBCs.


Subject(s)
Bacillus/cytology , Bacillus/enzymology , Extracellular Space/enzymology , Ribonucleases/isolation & purification , Ribonucleases/pharmacology , Animals , Cattle , Cell Line, Tumor , Cell Proliferation/drug effects , Cell Survival/drug effects , Hemolysis/drug effects , Humans , Kinetics , Ribonucleases/chemistry , Ribonucleases/toxicity
5.
Mini Rev Med Chem ; 17(4): 371-379, 2017.
Article in English | MEDLINE | ID: mdl-27468785

ABSTRACT

The humans worldwide are facing obesity as a major clinical threat because it is linked with cardiovascular diseases which often have serious consequences. Treatments available for body weight loss do not produce permanent weight loss and they often bear some side effects. To achieve safer antiobesetic therapeutics, researchers are moving towards plant-based therapeutic formulations. Many phytomolecules have been identified as anti-lipolytic functions but none of them have reached up to the clinical level. So there is an essential need to develop effective anti-obesetic medications which not only produce sufficient weight loss but also lack side effects. Plants may prove promising option for the same. In this article, medications and surgical procedures have been reviewed and dealt for weight loss and the role of phytomolecules in anti-obesetic therapeutics has been explored.


Subject(s)
Anti-Obesity Agents/pharmacology , Anti-Obesity Agents/therapeutic use , Enzyme Inhibitors/pharmacology , Enzyme Inhibitors/therapeutic use , Lipase/antagonists & inhibitors , Obesity/drug therapy , Obesity/surgery , Anti-Obesity Agents/chemistry , Enzyme Inhibitors/chemistry , Humans , Lipase/metabolism , Molecular Structure , Obesity/metabolism
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