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1.
Chemosphere ; 344: 140408, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37827461

ABSTRACT

Electro-Fenton is a promising game-changer for distributed wastewater treatments for the removal of recalcitrant compounds that it is possible to find in industrial effluent and looking for a water reuse approach. This electrochemical advanced oxidation process (EAOPs) is able to provide fast removal of organic compounds, like dyes, due to the in-situ H2O2 production and its reaction with Fe2+ to form hydroxyl radicals. The literature clearly reports that this reaction reaches its optimum in acid conditions (pH = 3) and low catalyst concentrations [Fe2+<0.5 mM]. This paper wants to investigate the effects of the shifting from optimal conditions on the removal of reactive black 5 (RB5), treating solutions which contain a higher amount of catalyst and a less acid pH. Textile effluents usually contain also other metals able to act as catalyst for Fenton reaction, like copper. Here its activity has been investigated as well as the possible synergistic effect with Fe2+. The results confirm that copper can enhance RB5 removal, especially in those conditions critical for ferrous cation. In the second part, possible process modifications to overcome the issues introduced by unfavourable operating conditions (pH > 3 and Fe2+ > 0.5 mM) are considered, such as the usage of a chelating agent (EDTA) and the application of a light source. The results show the positive impact of these two system modifications highlighting the possibility to enlarge the application window of electro-Fenton systems.


Subject(s)
Iron , Water Pollutants, Chemical , Iron/chemistry , Chelating Agents , Wastewater , Copper , Hydrogen Peroxide/chemistry , Water Pollutants, Chemical/analysis , Oxidation-Reduction
2.
Plant Dis ; 107(2): 493-499, 2023 Feb.
Article in English | MEDLINE | ID: mdl-36265157

ABSTRACT

Wheat stem rust, caused by Puccinia graminis f. sp. tritici, which used to be a harmful disease of winter wheat in the southern part of Russia, has been largely affecting the yield of spring bread wheat in the territories of the temperate climate zone since 2009. In total, 222 P. graminis f. sp. tritici isolates were obtained from samples of susceptible cultivars of spring bread wheat in Central and Volga regions and Omsk and Novosibirsk provinces in 2019. Genotyping of the isolates was carried out at 16 simple-sequence repeat (SSR) loci. Number of alleles, proportion of heterozygotes, and deviation from Hardy-Weinberg equilibrium were determined at each SSR locus. Based on genetic variability of SSR genotypes, it was shown that the P. graminis f. sp. tritici population is subdivided into two large clusters in the territory of the Russian temperate climate zone: the "European" population (the Central region) and the "Asian" one (the Volga region and two main wheat provinces of Western Siberia). Both of the P. graminis f. sp. tritici populations are characterized by a mixed mode of reproduction (sexual and clonal) but different sources of inoculum seem to shape a genotype structure within them. A group of P. graminis f. sp. tritici genotypes with high variability, the inbreeding coefficient closed to zero, and low observed heterozygosity was revealed among samples from Omsk. Moreover, two singular SSR genotypes identified among the Asian samples of P. graminis f. sp. tritici isolates should attract special attention in the monitoring of stem rust in order to disclose unexpected rapid changes of the pathogen in the corresponding regions and to prevent disease outbreak.


Subject(s)
Basidiomycota , Bread , Plant Diseases , Basidiomycota/genetics , Genotype , Russia
3.
Front Plant Sci ; 13: 882440, 2022.
Article in English | MEDLINE | ID: mdl-35720526

ABSTRACT

The objective of this study was to investigate the re-emergence of a previously important crop pathogen in Europe, Puccinia graminis f.sp. tritici, causing wheat stem rust. The pathogen has been insignificant in Europe for more than 60 years, but since 2016 it has caused epidemics on both durum wheat and bread wheat in local areas in southern Europe, and additional outbreaks in Central- and West Europe. The prevalence of three distinct genotypes/races in many areas, Clade III-B (TTRTF), Clade IV-B (TKTTF) and Clade IV-F (TKKTF), suggested clonal reproduction and evolution by mutation within these. None of these genetic groups and races, which likely originated from exotic incursions, were detected in Europe prior to 2016. A fourth genetic group, Clade VIII, detected in Germany (2013), was observed in several years in Central- and East Europe. Tests of representative European wheat varieties with prevalent races revealed high level of susceptibility. In contrast, high diversity with respect to virulence and Simple Sequence Repeat (SSR) markers were detected in local populations on cereals and grasses in proximity to Berberis species in Spain and Sweden, indicating that the alternate host may return as functional component of the epidemiology of wheat stem rust in Europe. A geographically distant population from Omsk and Novosibirsk in western Siberia (Russia) also revealed high genetic diversity, but clearly different from current European populations. The presence of Sr31-virulence in multiple and highly diverse races in local populations in Spain and Siberia stress that virulence may emerge independently when large geographical areas and time spans are considered and that Sr31-virulence is not unique to Ug99. All isolates of the Spanish populations, collected from wheat, rye and grass species, were succesfully recovered on wheat, which underline the plasticity of host barriers within P. graminis. The study demonstrated successful alignment of two genotyping approaches and race phenotyping methodologies employed by different laboratories, which also allowed us to line up with previous European and international studies of wheat stem rust. Our results suggest new initiatives within disease surveillance, epidemiological research and resistance breeding to meet current and future challenges by wheat stem rust in Europe and beyond.

4.
Int J Mol Sci ; 23(10)2022 May 21.
Article in English | MEDLINE | ID: mdl-35628589

ABSTRACT

It is known that ammonium has a higher permeability through anion exchange and bipolar membranes compared to K+ cation that has the same mobility in water. However, the mechanism of this high permeability is not clear enough. In this study, we develop a mathematical model based on the Nernst−Planck and Poisson's equations for the diffusion of ammonium chloride through an anion-exchange membrane; proton-exchange reactions between ammonium, water and ammonia are taken into account. It is assumed that ammonium, chloride and OH− ions can only pass through membrane hydrophilic pores, while ammonia can also dissolve in membrane matrix fragments not containing water and diffuse through these fragments. It is found that due to the Donnan exclusion of H+ ions as coions, the pH in the membrane internal solution increases when approaching the membrane side facing distilled water. Consequently, there is a change in the principal nitrogen-atom carrier in the membrane: in the part close to the side facing the feed NH4Cl solution (pH < 8.8), it is the NH4+ cation, and in the part close to distilled water, NH3 molecules. The concentration of NH4+ reaches almost zero at a point close to the middle of the membrane cross-section, which approximately halves the effective thickness of the diffusion layer for the transport of this ion. When NH3 takes over the nitrogen transport, it only needs to pass through the other half of the membrane. Leaving the membrane, it captures an H+ ion from water, and the released OH− moves towards the membrane side facing the feed solution to meet the NH4+ ions. The comparison of the simulation with experiment shows a satisfactory agreement.


Subject(s)
Ammonia , Ammonium Compounds , Ammonium Chloride , Anions , Chlorides , Nitrogen , Permeability , Water
5.
Plants (Basel) ; 10(8)2021 Jul 21.
Article in English | MEDLINE | ID: mdl-34451545

ABSTRACT

Diseases of cereals caused by pathogenic fungi can significantly reduce crop yields. Many cultures are exposed to them. The disease is difficult to control on a large scale; thus, one of the relevant approaches is the crop field monitoring, which helps to identify the disease at an early stage and take measures to prevent its spread. One of the effective control methods is disease identification based on the analysis of digital images, with the possibility of obtaining them in field conditions, using mobile devices. In this work, we propose a method for the recognition of five fungal diseases of wheat shoots (leaf rust, stem rust, yellow rust, powdery mildew, and septoria), both separately and in case of multiple diseases, with the possibility of identifying the stage of plant development. A set of 2414 images of wheat fungi diseases (WFD2020) was generated, for which expert labeling was performed by the type of disease. More than 80% of the images in the dataset correspond to single disease labels (including seedlings), more than 12% are represented by healthy plants, and 6% of the images labeled are represented by multiple diseases. In the process of creating this set, a method was applied to reduce the degeneracy of the training data based on the image hashing algorithm. The disease-recognition algorithm is based on the convolutional neural network with the EfficientNet architecture. The best accuracy (0.942) was shown by a network with a training strategy based on augmentation and transfer of image styles. The recognition method was implemented as a bot on the Telegram platform, which allows users to assess plants by lesions in the field conditions.

6.
Membranes (Basel) ; 11(6)2021 Jun 07.
Article in English | MEDLINE | ID: mdl-34200417

ABSTRACT

In recent years, electrochemical methods utilizing reactive electrochemical membranes (REM) have been recognized as the most promising technologies for the removal of organic pollutants from water. In this paper, we propose a 1D convection-diffusion-reaction model concerning the transport and oxidation of oxalic acid (OA) and oxygen evolution in the flow-through electrochemical oxidation system with REM. It allows the determination of unknown parameters of the system by treatment of experimental data and predicts the behavior of the electrolysis setup. There is a good agreement in calculated and experimental data at different transmembrane pressures and initial concentrations of OA. The model provides an understanding of the processes occurring in the system and gives the concentration, current density, potential, and overpotential distributions in REM. The dispersion coefficient was determined as a fitting parameter and it is in good agreement with literary data for similar REMs. It is shown that the oxygen evolution reaction plays an important role in the process even under the kinetic limit, and its contribution decreases with increasing total organic carbon flux through the REM.

7.
Int J Mol Sci ; 22(11)2021 May 22.
Article in English | MEDLINE | ID: mdl-34067406

ABSTRACT

The use of reactive electrochemical membranes (REM) in flow-through mode during the anodic oxidation of organic compounds makes it possible to overcome the limitations of plate anodes: in the case of REM, the area of the electrochemically active surface is several orders of magnitude larger, and the delivery of organic compounds to the reaction zone is controlled by convective flow rather than diffusion. The main problem with REM is the formation of fouling and gas bubbles in the pores, which leads to a decrease in the efficiency of the process because the hydraulic resistance increases and the electrochemically active surface is shielded. This work aims to study the processes underlying the reduction in the efficiency of anodic oxidation, and in particular the formation of gas bubbles and the recharge of the REM pore surface at a current density exceeding the limiting kinetic value. We propose a simple one-dimensional non-stationary model of the transport of diluted species during the anodic oxidation of paracetamol using REM to describe the above effects. The processing of the experimental data was carried out. It was found that the absolute value of the zeta potential of the pore surface decreases with time, which leads to a decrease in the permeate flux due to a reduction in the electroosmotic flow. It was shown that in the solution that does not contain organic components, gas bubbles form faster and occupy a larger pore fraction than in the case of the presence of paracetamol; with an increase in the paracetamol concentration, the gas fraction decreases. This behavior is due to a decrease in the generation of oxygen during the recombination reaction of the hydroxyl radicals, which are consumed in the oxidation reaction of the organic compounds. Because the presence of bubbles increases the hydraulic resistance, the residence time of paracetamol-and consequently its degradation degree-increases, but the productivity goes down. The model has predictive power and, after simple calibration, can be used to predict the performance of REM anodic oxidation systems.


Subject(s)
Gases/chemistry , Organic Chemicals/chemistry , Electrodes , Hydroxyl Radical/chemistry , Membranes, Artificial , Oxidation-Reduction , Water Pollutants, Chemical/chemistry
8.
BMC Plant Biol ; 20(Suppl 1): 135, 2020 Oct 14.
Article in English | MEDLINE | ID: mdl-33050873

ABSTRACT

BACKGROUND: Leaf rust (Puccinia triticina Eriks.) is one of the most dangerous diseases of common wheat worldwide. Three approaches: genome-wide association study (GWAS), marker-assisted selection (MAS) and phytopathological evaluation in field, were used for assessment of the genetic diversity of Russian spring wheat varieties on leaf rust resistance loci and for identification of associated molecular markers. RESULTS: The collection, consisting of 100 Russian varieties of spring wheat, was evaluated over three seasons for resistance to the native population of leaf rust specific to the West Siberian region of Russia. The results indicated that most cultivars showed high susceptibility to P. triticina, with severity ratings (SR) of 60S-90S, however some cultivars showed a high level of leaf rust resistance (SR < 20MR-R). Based on the results of genome-wide association studies (GWAS) performed using the wheat 15 K genotyping array, 20 SNPs located on chromosomes 6D, 6A, 6B, 5A, 1B, 2A, 2B and 7A were revealed to be associated with leaf rust resistance. Genotyping with markers developed for known leaf rust resistance genes showed that most of the varieties contain genes Lr1, Lr3a, Lr9, Lr10, Lr17a, Lr20, Lr26 and Lr34, which are not currently effective against the pathogen. In the genome of three wheat varieties, gene Lr6Ai = 2 inherited from Th. intermedium was detected, which provides complete protection against the rust pathogen. It has been suggested that the QTL mapped to the chromosome 5AS of wheat cultivar Tulaikovskaya-zolotistaya, Tulaikovskaya-10, Samsar, and Volgouralskaya may be a new, previously undescribed locus conferring resistance to leaf rust. Obtained results also indicate that chromosome 1BL of the varieties Sonata, Otrada-Sibiri, Tertsiya, Omskaya-23, Tulaikovskaya-1, Obskaya-14, and Sirena may contain an unknown locus that provides a resistance response to local population. CONCLUSIONS: This study provides new insights into the genetic basis of resistance to leaf rust in Russian spring wheat varieties. The SNPs significantly associated with leaf rust resistance can be used for the development and application of diagnostic markers in marker-assisted selection schemes.


Subject(s)
Plant Diseases/genetics , Puccinia , Triticum/genetics , Chromosome Mapping , Chromosomes, Plant , Disease Resistance/genetics , Genetic Markers , Genome, Plant , Genome-Wide Association Study , Plant Diseases/microbiology , Polymorphism, Single Nucleotide , Russia , Seasons , Triticum/microbiology
9.
Int J Mol Sci ; 21(13)2020 Jul 01.
Article in English | MEDLINE | ID: mdl-32630293

ABSTRACT

Stem rust caused by Puccinia graminis f. sp. tritici Eriks. is a dangerous disease of common wheat worldwide. Development and cultivation of the varieties with genetic resistance is one of the most effective and environmentally important ways for protection of wheat against fungal pathogens. Field phytopathological screening and genome-wide association study (GWAS) were used for assessment of the genetic diversity of a collection of spring wheat genotypes on stem rust resistance loci. The collection consisting of Russian varieties of spring wheat and introgression lines with alien genetic materials was evaluated over three seasons (2016, 2017 and 2018) for resistance to the native population of stem rust specific to the West Siberian region of Russia. The results indicate that most varieties displayed from moderate to high levels of susceptibility to P. graminis; 16% of genotypes had resistance or immune response. In total, 13,006 single-nucleotide polymorphism (SNP) markers obtained from the Infinium 15K array were used to perform genome-wide association analysis. GWAS detected 35 significant marker-trait associations (MTAs) with SNPs located on chromosomes 1A, 2A, 2B, 3B, 5A, 5B, 6A, 7A and 7B. The most significant associations were found on chromosomes 7A and 6A where known resistance genes Sr25 and Sr6Ai = 2 originated from Thinopyrum ssp. are located. Common wheat lines containing introgressed fragments from Triticum timopheevii and Triticum kiharae were found to carry Sr36 gene on 2B chromosome. It has been suggested that the quantitative trait loci (QTL) mapped to the chromosome 5BL may be new loci inherited from the T. timopheevii. It can be inferred that a number of Russian wheat varieties may contain the Sr17 gene, which does not currently provide effective protection against pathogen. This is the first report describing the results of analysis of the genetic factors conferring resistance of Russian spring wheat varieties to stem rust.


Subject(s)
Disease Resistance/genetics , Puccinia/pathogenicity , Triticum/genetics , Chromosome Mapping/methods , Chromosomes, Plant/genetics , Genome-Wide Association Study/methods , Genomics/methods , Genotype , Linkage Disequilibrium/genetics , Phenotype , Plant Breeding/methods , Plant Diseases/genetics , Polymorphism, Single Nucleotide/genetics , Puccinia/genetics , Quantitative Trait Loci/genetics , Russia , Triticum/growth & development
10.
Membranes (Basel) ; 10(5)2020 May 16.
Article in English | MEDLINE | ID: mdl-32429328

ABSTRACT

In recent years, electrochemical methods utilizing reactive electrochemical membranes (REM) have been considered as a promising technology for efficient degradation and mineralization of organic compounds in natural, industrial and municipal wastewaters. In this paper, we propose a two-dimensional (2D) convection-diffusion-reaction model concerning the transport and reaction of organic species with hydroxyl radicals generated at a TiOx REM operated in flow-through mode. It allows the determination of unknown parameters of the system by treatment of experimental data and predicts the behavior of the electrolysis setup. There is a good agreement in the calculated and experimental degradation rate of a model pollutant at different permeate fluxes and current densities. The model also provides an understanding of the current density distribution over an electrically heterogeneous surface and its effect on the distribution profile of hydroxyl radicals and diluted species. It was shown that the percentage of the removal of paracetamol increases with decreasing the pore radius and/or increasing the porosity. The effect becomes more pronounced as the current density increases. The model highlights how convection, diffusion and reaction limitations have to be taken into consideration for understanding the effectiveness of the process.

11.
BMC Bioinformatics ; 20(Suppl 1): 36, 2019 Feb 05.
Article in English | MEDLINE | ID: mdl-30717653

ABSTRACT

Population structure of fungal infections in wheat differs between wheat varieties and environments. Taking into account evolution of host-pathogen interactions, genetic diversity of both wheat and fungus must be a monitored. In order to catalogue information to support need of wheat pathologists and breeders, who use conventional methods and Molecular Assisted Selection (MAS) techniques, we have developed the Molecular Identification of Genes for Resistance in Wheat (MIGREW) database. The main goal of this database is to support wheat breeding efforts to develop immunity to rusts and powdery mildew. MIGREW is also focused on effectiveness of wheat resistance genes in different regions of Russia to provide users relevant information on the rapidly changing population structure of pathogens.


Subject(s)
Databases, Genetic , Disease Resistance/genetics , Genes, Plant , Triticum/genetics , Triticum/microbiology , Genetic Markers , Plant Diseases/genetics , Plant Diseases/microbiology , Virulence/genetics
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