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1.
Genetika ; 44(10): 1435-7, 2008 Oct.
Article in Russian | MEDLINE | ID: mdl-19062542

ABSTRACT

Mutation Y168H of the human phenylalanine hydroxylase (PAH) gene determining phenylketonuria was described only twice: in a patient from Catalonia (Spain) and by us in a patient from Western Siberia (Russia). The association of Y168H in these families with allelic variants of STR and VNTR repeats and a number of neutral point polymorphisms of the PHA gene (IVS3nt-22C > T, Q232Q, V245V, L385L) was studied in this work. The Y186H mutation in these families was found to be associated with different haplotypes. Strong linkage of the selected markers and the mutation region excludes recombination as a possible cause of association of Y168H with different haplotypes. It was concluded that Y168H occurred independently in different populations.


Subject(s)
Genetic Linkage , Mutation, Missense , Phenylalanine Hydroxylase/genetics , Phenylketonurias/genetics , Polymorphism, Genetic , Haplotypes , Humans , Siberia , Spain
2.
Oncogene ; 26(36): 5204-13, 2007 Aug 09.
Article in English | MEDLINE | ID: mdl-17310981

ABSTRACT

The critical role for GATA family proteins in maintaining the normal (non-transformed) cell state is corroborated by the recent findings of mutations or methylation in GATA genes both in primary cancers and tumor lines including breast. Previously, microarray profiling studies determined that the highest expression of both GATA3 and ESR1 (estrogen receptor alpha) is seen in tumors associated with the most favorable survival outcomes, whereas the lowest expression of GATA3 is detected in tumor subtypes showing the worst outcomes. At this time, genes and pathways that are regulated by GATA3 in the mammary gland are not well defined. We have previously established a requirement for FOG (Friend Of GATA) cofactors during mouse development. Here we report that in the murine mammary gland Fog2 gene expression is upregulated upon pregnancy and lactation with prominent expression in the epithelial cells of the gland during post-lactational regression. Mammary-specific deletion of Fog2 identified a role for this gene during gland involution; excision of the Fog2 gene leads to the accelerated involution of the gland despite diminished levels of the remodeling enzymes. Importantly, the levels of several genes linked to the control of cancerous transformation in the breast (Esr1, Prg and Foxa1) are significantly reduced upon Fog2 excision. This implicates FOG2 in the maintenance of epithelial cell differentiation in the mammary gland and in performing a protective role in breast cancer.


Subject(s)
DNA-Binding Proteins/genetics , Estrogen Receptor alpha/genetics , Gene Expression , Mammary Glands, Animal/cytology , Transcription Factors/genetics , Animals , Apoptosis , Female , Genotype , Immunohistochemistry , Male , Mammary Glands, Animal/metabolism , Mice , Reverse Transcriptase Polymerase Chain Reaction
4.
Genetika ; 40(2): 272-6, 2004 Feb.
Article in Russian | MEDLINE | ID: mdl-15065437

ABSTRACT

Mutations were studied in phenylalanine hydroxylase gene of phenylketonuria patients from Kemerovo oblast and Altaiskii krai (15 and 2 families, respectively). The following mutations were identified in exons of this gene: R408W, R261Q, R243Q, Y414C, Y386C, P281L, Y168H, R68S (lead to amino acid substitutions), R243X (leads to stop codon formation), and three splice site mutations (IVS12nt 1g-->a, IVS2nt-13t-->g, IVS7nt 1g-->a).


Subject(s)
Mutation , Phenylalanine Hydroxylase/genetics , Sequence Analysis, DNA/instrumentation , Automation , Base Sequence , Codon, Terminator , DNA Primers , Exons
5.
Mol Gen Mikrobiol Virusol ; (3): 22-5, 2003.
Article in Russian | MEDLINE | ID: mdl-12966922

ABSTRACT

Quantities of Ureaplasma spp DNA were determined by the methods of competitive and multiplex polymerase chain reactions (PCR). The results obtained by each of the methods were shown to be compatible. It was established that the number of Ureaplasma spp. cells per one epithelial cell in the female cervical canal varied from 0.05 to 10.


Subject(s)
DNA, Bacterial/analysis , Polymerase Chain Reaction/methods , Ureaplasma/genetics , DNA Primers , DNA, Bacterial/genetics , Female , Humans , Phenylalanine Hydroxylase/genetics , RNA, Ribosomal, 16S/genetics , Sensitivity and Specificity , Ureaplasma/chemistry , Ureaplasma Infections/microbiology
7.
Genetika ; 36(6): 849-52, 2000 Jun.
Article in Russian | MEDLINE | ID: mdl-10923269

ABSTRACT

The spectrum and frequency of mutations of exon 7 of the gene for phenylalanine hydroxylase (PAH) were studied in 34 phenylketonuria (PKU) patients living in Novosibirsk oblast. The five most prevalent mutations constituted 17.64% of defective alleles: R243Q (1.47%), R252W (1.47%), R261Q (5.88%), E280K (1.47%), and P281L (7.35%). A neutral polymorphic locus V245V was found within exon 7.


Subject(s)
Exons , Mutation , Phenylalanine Hydroxylase/genetics , Phenylketonurias/genetics , Humans , Phenylketonurias/enzymology , Phenylketonurias/ethnology , Polymorphism, Genetic , Siberia
8.
Genetika ; 36(12): 1716-8, 2000 Dec.
Article in Russian | MEDLINE | ID: mdl-11190481

ABSTRACT

A previously unknown sequence of the human phenylalanine hydroxylase (PAH) gene intron 7 (GeneBank AN AF204239) has been reported. Screening of the group of phenylketonuria patients from Nobosibirsk region for polymorphic sites within intron 7 revealed single nucleotide substitutions at intron positions 332, 451, 574 and 791. Polymorphic site at intron position 791 corresponds to one of the eight restriction sites (MspI) utilized for haplotype construction. Analysis of the MspI allele frequencies in 29 phenylketonuria patients showed that the frequency of the MspI+ allele in this group was 79.4%. Polymorphic sites at nucleotide position +97 from the beginning of intron 10, and at nucleotide position -54 from the end of intron 5, were also described. The polymorphic sites revealed can be used as markers for identification of the PAH alleles in population genetic studies, and also serve for diagnostics of phenylketonuria (PKU). The presence of numerous nucleotide substitutions within the intronic sequences confirms highly polymorphic structure of the PAH gene.


Subject(s)
Phenylalanine Hydroxylase/genetics , Phenylketonurias/genetics , Polymorphism, Genetic , Alleles , Base Sequence , DNA Primers , Deoxyribonuclease HpaII/metabolism , Gene Frequency , Humans , Introns
9.
Bioorg Khim ; 26(11): 838-43, 2000 Nov.
Article in Russian | MEDLINE | ID: mdl-11696894

ABSTRACT

Phenylketonuria (PKU) is a widespread autosome recessive hereditary disease caused by a deficiency of the liver enzyme phenylalanine hydroxylase, which results in the distortion of phenylalanine metabolism and accumulation of toxic metabolites. The knowledge of molecular bases of PKU is of a high social importance as it enables phenotypic correction of the disease in the case of its early diagnostics. This disease is known to be associated with mutations in the phenylalanine hydroxylase gene, the distribution and mutation spectrum having pronounced ethnic and regional features. We studied the spectrum of mutations in the phenylalanine hydroxylase gene in a group of patients with PKU from the Novosibirsk region to reveal 10 missense point mutations, 1 mutation in the splice donor site, and 1 microdeletion. For these mutations, most widely distributed in the region, we used straightforward detection methods based on the restriction fragment length polymorphism (RFLP), artificial constructed restriction sites (ACRS) PCR, and denaturing gradient gel electrophoresis (DGGE).


Subject(s)
Phenylalanine Hydroxylase/genetics , Phenylketonurias/enzymology , Humans , Mutation, Missense , Point Mutation , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Sequence Deletion
10.
Bioorg Khim ; 25(4): 312-20, 1999 Apr.
Article in Russian | MEDLINE | ID: mdl-10422597

ABSTRACT

The previously unknown sequences of the coding and 3'-flanking regions of the rat tyrosine aminotransferase gene were determined. The boundaries of exons and repetitive elements were established using computer analysis.


Subject(s)
Tyrosine Transaminase/genetics , Amino Acid Sequence , Animals , Base Sequence , Exons , Molecular Sequence Data , Rats , Rats, Wistar
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