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1.
Org Biomol Chem ; 10(45): 8963-74, 2012 Dec 07.
Article in English | MEDLINE | ID: mdl-23051904

ABSTRACT

The intramolecular nitrone dipolar cycloaddition of in situ-generated nitrones such as compound 26 has been used for the synthesis of cyclic isoxazolidines 27 and 29. The regioselectivity of the intramolecular cycloaddition depends on the nature of the terminal substituent on the dipolarophile. The influence of the substituent on the regioselectivity of the cycloaddition has been examined using several model systems and two methods of nitrone formation. These studies demonstrated that the cyano-substituent plays a special role in favouring the formation of the 6,6,5-ring fused adduct 27 under thermodynamically controlled conditions. The utility of the cyclo-adduct 57 (see Scheme 12) as a precursor for the naturally occurring histrionicotoxins is illustrated by the synthesis of three "unsymmetrical" (i.e. with each side chain bearing different functional groups) members of the histrionicotoxin family HTX-259A, HTX-285C and HTX-285E (2, 3 and 4 respectively).


Subject(s)
Alkaloids/chemistry , Alkaloids/chemical synthesis , Amphibian Venoms/chemistry , Amphibian Venoms/chemical synthesis , Biological Products/chemical synthesis , Nitrogen Oxides/chemistry , Spiro Compounds/chemistry , Biological Products/chemistry , Cycloaddition Reaction , Stereoisomerism , Substrate Specificity
2.
Org Biomol Chem ; 9(6): 1927-37, 2011 Mar 21.
Article in English | MEDLINE | ID: mdl-21283873

ABSTRACT

Here we describe general flow processes for the synthesis of alkyl and aryl azides, and the development of a new monolithic triphenylphosphine reagent, which provides a convenient format for the use of this versatile reagent in flow. The utility of these new tools was demonstrated by their application to a flow Staudinger aza-Wittig reaction sequence. Finally, a multistep aza-Wittig, reduction and purification flow process was designed, allowing access to amine products in an automated fashion.


Subject(s)
Amines/chemical synthesis , Azides/chemical synthesis , Imines/chemical synthesis , Organophosphorus Compounds/chemistry , Alkylation , Molecular Structure
3.
Org Biomol Chem ; 9(6): 1938-47, 2011 Mar 21.
Article in English | MEDLINE | ID: mdl-21283874

ABSTRACT

Having demonstrated in the preceding publication the flow synthesis of aryl azides, we describe here a general protocol for the in-line purification of these versatile intermediates. As part of this investigation, we evaluated the use of ReactIR 45m as a tool for real-time detection of hazardous azide contaminants. This azide synthesis and purification process was then incorporated into a multistep flow sequence to generate a small collection of 5-amino-4-cyano-1,2,3-triazoles directly from aniline starting materials in a fully automated fashion.

4.
BMC Microbiol ; 8: 86, 2008 Jun 02.
Article in English | MEDLINE | ID: mdl-18518958

ABSTRACT

BACKGROUND: Brucellosis, caused by members of the genus Brucella, remains one of the world's major zoonotic diseases. Six species have classically been recognised within the family Brucella largely based on a combination of classical microbiology and host specificity, although more recently additional isolations of novel Brucella have been reported from various marine mammals and voles. Classical identification to species level is based on a biotyping approach that is lengthy, requires extensive and hazardous culturing and can be difficult to interpret. Here we describe a simple and rapid approach to identification of Brucella isolates to the species level based on real-time PCR analysis of species-specific single nucleotide polymorphisms (SNPs) that were identified following a robust and extensive phylogenetic analysis of the genus. RESULTS: Seven pairs of short sequence Minor Groove Binding (MGB) probes were designed corresponding to SNPs shown to possess an allele specific for each of the six classical Brucella spp and the marine mammal Brucella. Assays were optimised to identical reaction parameters in order to give a multiple outcome assay that can differentiate all the classical species and Brucella isolated from marine mammals. The scope of the assay was confirmed by testing of over 300 isolates of Brucella, all of which typed as predicted when compared to other phenotypic and genotypic approaches. The assay is sensitive being capable of detecting and differentiating down to 15 genome equivalents. We further describe the design and testing of assays based on three additional SNPs located within the 16S rRNA gene that ensure positive discrimination of Brucella from close phylogenetic relatives on the same platform. CONCLUSION: The multiple-outcome assay described represents a new tool for the rapid, simple and unambiguous characterisation of Brucella to the species level. Furthermore, being based on a robust phylogenetic framework, the assay provides a platform that can readily be extended in the future to incorporate newly identified Brucella groups, to further type at the subspecies level, or to include markers for additional useful characteristics.


Subject(s)
Animal Diseases/microbiology , Bacterial Typing Techniques/methods , Brucella/isolation & purification , Brucellosis/veterinary , Polymorphism, Single Nucleotide , Animals , Bacterial Proteins/genetics , Base Sequence , Brucella/classification , Brucella/genetics , Brucellosis/microbiology , DNA Primers/genetics , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Genotype , Molecular Sequence Data , Polymerase Chain Reaction/methods , RNA, Ribosomal, 16S/genetics , Sensitivity and Specificity , Sequence Alignment , Species Specificity
5.
Chem Commun (Camb) ; (18): 2152-4, 2008 May 14.
Article in English | MEDLINE | ID: mdl-18438499

ABSTRACT

The synthesis of a family of O-silylcarbamates from the corresponding silylamines has been achieved simply by heating the silylamine in supercritical carbon dioxide (scCO2), and these O-silylcarbamates have been shown to be effective precursors for the synthesis of a range of symmetrical and unsymmetrical ureas.


Subject(s)
Carbamates/chemical synthesis , Carbon Dioxide/chemistry , Trimethylsilyl Compounds/chemical synthesis , Urea/analogs & derivatives , Urea/chemical synthesis , Amines/chemistry , Carbamates/chemistry , Molecular Structure , Pressure , Stereoisomerism , Trimethylsilyl Compounds/chemistry , Urea/chemistry
6.
J Am Chem Soc ; 130(6): 2087-100, 2008 Feb 13.
Article in English | MEDLINE | ID: mdl-18198870

ABSTRACT

An efficient and highly stereoselective total synthesis of the natural product (+/-)-welwitindolinone A isonitrile (1) is described. The bicyclo[4.2.0]octane core of 1 was established by a regio- and diastereoselective [2+2] ketene cycloaddition. The C12 quaternary center and vicinal stereogenic chlorine were installed in a single operation with excellent stereocontrol via a chloronium ion mediated semipinacol rearrangement. Described strategies for construction of the spiro-oxinole include a SmI2-LiCl mediated reductive cyclization and a novel anionic cyclization that simultaneously constructs the spiro-oxindole and vinyl isonitrile moieties.


Subject(s)
Bridged Bicyclo Compounds/chemistry , Indole Alkaloids/chemical synthesis , Octanes/chemistry , Cyclization , Indole Alkaloids/chemistry , Indoles/chemical synthesis , Indoles/chemistry , Ketones/chemical synthesis , Ketones/chemistry , Molecular Conformation , Spiro Compounds/chemical synthesis , Spiro Compounds/chemistry , Stereoisomerism
7.
Org Biomol Chem ; 5(17): 2758-61, 2007 Sep 07.
Article in English | MEDLINE | ID: mdl-17700841

ABSTRACT

A new approach to the synthesis of 5-amino-4-cyanopyrazoles has been developed, utilising a novel flow microwave device. These products are then converted by a batch mode microwave process to structurally more complex dimeric and 'mixed' pyrazolopyrimidine structures.

8.
Aquat Toxicol ; 82(2): 94-109, 2007 May 01.
Article in English | MEDLINE | ID: mdl-17343929

ABSTRACT

Mammalian studies have raised concerns about the toxicity of carbon nanotubes (CNTs), but there is very limited data on ecotoxicity to aquatic life. We describe the first detailed report on the toxicity of single walled carbon nanotubes (SWCNT) to rainbow trout, using a body systems approach. Stock solutions of dispersed SWCNT were prepared using a combination of solvent (sodium dodecyl sulphate, SDS) and sonication. A semi-static test system was used to expose rainbow trout to either a freshwater control, solvent control, 0.1, 0.25 or 0.5 mgl(-1) SWCNT for up to 10 days. SWCNT exposure caused a dose-dependent rise in ventilation rate, gill pathologies (oedema, altered mucocytes, hyperplasia), and mucus secretion with SWCNT precipitation on the gill mucus. No major haematological or blood disturbances were observed in terms of red and white blood cell counts, haematocrits, whole blood haemoglobin, and plasma Na(+) or K(+). Tissue metal levels (Na(+), K(+), Ca(2+), Cu, Zn and Co) were generally unaffected. However some dose-dependent changes in brain and gill Zn or Cu were observed (but not tissue Ca(2+)), that were also partly attributed to the solvent. SWCNT exposure caused statistically significant increases in Na(+)K(+)-ATPase activity in the gills and intestine, but not in the brain. Thiobarbituric acid reactive substances (TBARS) showed dose-dependent and statistically significant decreases especially in the gill, brain and liver during SWCNT exposure compared to controls. SWCNT exposure caused statistically significant increases in the total glutathione levels in the gills (28%) and livers (18%), compared to the solvent control. Total glutathione in the brain and intestine remained stable in all treatments. Pathologies in the brain included possible aneurisms or swellings on the ventral surface of the cerebellum. Liver cells exposed to SWCNT showed condensed nuclear bodies (apoptotic bodies) and cells in abnormal nuclear division. Overt fatty change or wide spread lipidosis was absent in the liver. Fish ingested water containing SWCNT during exposure (presumably stress-induced drinking) which resulted in precipitated SWCNT in the gut lumen and intestinal pathology. Aggressive behaviour and fin nipping caused some mortalities at the end of the experiment, which may be associated with the gill irritation and brain injury, although the solvent may also partly contributed to aggression. Overall we conclude that SWCNTs are a respiratory toxicant in trout, the fish are able to manage oxidative stress and osmoregulatory disturbances, but other cellular pathologies raise concerns about cell cycle defects, neurotoxicity, and as yet unidentified blood borne factors that possibly mediate systemic pathologies.


Subject(s)
Gills/drug effects , Nanotubes, Carbon/toxicity , Oncorhynchus mykiss/physiology , Water Pollutants, Chemical/toxicity , Animals , Behavior, Animal/drug effects , Brain/drug effects , Dose-Response Relationship, Drug , Gills/chemistry , Glutathione/analysis , Intestines/drug effects , Ions/blood , Liver/drug effects , Metals/analysis , Mortality , Nanotubes, Carbon/ultrastructure , Oxidative Stress , Sodium-Potassium-Exchanging ATPase/analysis , Sodium-Potassium-Exchanging ATPase/drug effects , Solvents/toxicity , Thiobarbituric Acid Reactive Substances/analysis , Time Factors
9.
J Am Chem Soc ; 128(5): 1448-9, 2006 Feb 08.
Article in English | MEDLINE | ID: mdl-16448105

ABSTRACT

A highly stereoselective total synthesis of the alkaloid natural product welwitindolinone A isonitrile has been completed. The synthesis utilizes a chloronium ion mediated semi-pinacol rearrangement to simultaneously install the C10 quaternary center and neopentyl chlorine and a novel anionic cyclization to construct the spiro-oxindole with complete stereocontrol.


Subject(s)
Indoles/chemical synthesis , Nitriles/chemical synthesis , Cyanobacteria/chemistry , Indole Alkaloids , Indoles/chemistry , Nitriles/chemistry
10.
Emerg Med Australas ; 18(1): 31-6, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16454772

ABSTRACT

OBJECTIVE: To determine whether the 'Timed Up and Go' (TUG) test is a useful test for predicting re-attendance at an ED, emergency hospital admission or death within 90 days in elderly patients discharged from the ED. METHODS: This was a prospective blinded cohort study at a tertiary referral ED. Patients completed a TUG test during their Allied Health assessment prior to discharge from the department. After 90 days, patient ED attendances, emergency admissions to hospital or deaths were recorded and confirmed by phone. Data were analysed using logistic regression and reported as odds ratios (OR) or log-transformation and Pearson analysis. RESULTS: One hundred patients were enrolled: 78 (78%, 95% confidence interval [CI] 70-86%) patients remained event free, 22 (22%, 95% CI 14-30%) patients re-attended an ED and 15 (15%, 95% CI 8-22%) were admitted to hospital as an emergency admission. There was no significant difference between TUG test times and whether patients re-attended an ED (OR 1.0 [0.93-1.06] P = 0.9) or were admitted to hospital (OR 0.99 [0.91-1.07] P = 0.74). There was no significant correlation between a patient's TUG test time and the number of days to ED re-attendance (Pearson correlation coefficient 0.38 [-0.04 to 0.69] P = 0.08) or admission (Pearson correlation coefficient 0.32 [-0.23 to 0.71] P = 0.25). CONCLUSION: This study did not detect any predictive value of the TUG test for ED re-attendance or hospital admission within 90 days of discharge among aged ED patients.


Subject(s)
Mass Screening/instrumentation , Patient Discharge , Aged , Aged, 80 and over , Cohort Studies , Emergency Service, Hospital , Humans , Patient Readmission , Pilot Projects , Predictive Value of Tests , Prospective Studies , Risk Assessment/methods , Survival Analysis , Victoria
11.
Org Biomol Chem ; 3(20): 3767-81, 2005 Oct 21.
Article in English | MEDLINE | ID: mdl-16211113

ABSTRACT

Palladium catalysed C-N bond formation in supercritical carbon dioxide has been accomplished. Carbamic acid formation is avoided in part through the use of an N-silylamine as the coupling partner. Employing a catalyst system of Pd2dba3(1 mol%) and 2-dicyclohexylphosphino-2',4',6'-triisopropyl-1,1'-biphenyl (X-Phos)(2 mol%) enabled the catalytic amination of aryl bromides and chlorides with N-silylanilines to be realised in excellent yield. Extension of the methodology to the N-arylation of N-silyldiarylamines, N-silylazoles and N-silylsulfonamides is reported.


Subject(s)
Amines/chemical synthesis , Carbon Dioxide/chemistry , Hydrocarbons, Aromatic/chemistry , Palladium/chemistry , Silanes/chemistry , Amination , Amines/chemistry , Catalysis , Molecular Structure , Pressure , Stereoisomerism
12.
Chem Commun (Camb) ; (17): 1976-7, 2004 Sep 07.
Article in English | MEDLINE | ID: mdl-15340629

ABSTRACT

The palladium-catalysed formation of C-N bonds to produce a range of aryl amines in supercritical carbon dioxide is reported; carbamic acid formation is avoided in part by the use of N-silylamines as surrogates for the free amine.

13.
Chem Commun (Camb) ; (11): 1214-5, 2002 Jun 07.
Article in English | MEDLINE | ID: mdl-12109088

ABSTRACT

The first total syntheses of three "unsymmetrical" (i.e. different terminal groups in the side chains) members of the histrionicotoxin family of alkaloids have been accomplished via stepwise introduction of the two side chain moieties onto a common tricyclic core.


Subject(s)
Alkaloids/chemical synthesis , Alkynes/chemistry , Amphibian Venoms/chemical synthesis , Heterocyclic Compounds, 3-Ring/chemistry
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