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1.
Genetika ; 49(2): 214-23, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23668087

ABSTRACT

The results of the research confirming the possibility of applying various combinations of RAPD and ISSR primers in one multiplex PCR and the generation of a new type of R-ISSR products for the rye genome were presented in this work. The following was applied in the research: five rye genotypes including two inbred lines (153/79-1 and Otl-3), hybrid F1 and two bulks (tolerant and susceptible) formed from recombinant inbred lines - RILs (F9) varying in the response to abiotic stress caused by nutrient deficiencies at the seedling stage. While evaluating the possibility of applying R-ISSR to the assessment of the rye variability, five of its genotypes were amplified separately with the RAPD and ISSR primers in each PCR reaction. These primers were combined in R-ISSR amplifications. The products of RAPD, ISSR and R-ISSR amplification were separated in 1.5% agarose gel. 32 R-ISSR combinations were examined, combining 20 and 8 selected RAPD and ISSR primers, respectively. 658 loci were amplified, including 230 RAPD, 180 ISSR and 271 R-ISSR, including 157 new loci. Over 91 loci were found, with an identical electrophoretic mobility for three methods. It was shown that R-ISSR products with electrophoretic mobility on agarose gels, identical to the co-migrating RAPD or ISSR, are not products of RAPD or ISSR, but they possess sequences of heteroamplicons - R-ISSR. The occurrence of sequences of primers used to R-ISSR was demonstrated while sequencing seven selected products of the above type. The ISSR primers with a low Tm were proven to generate repeatable fingerprints in the thermal profile of the reaction specific for RAPD and combined with the RAPD primer - repeatable R-ISSR profiles. A similar range of variability as described in RAPD or ISSR was observed in the R-ISSR profiles. The correlation coefficient between genetic similarity matrices for five rye genotypes, calculated with the Mantel test, amounted to rABC = 0.870.


Subject(s)
Random Amplified Polymorphic DNA Technique/methods , Secale/genetics , Base Sequence , Chromosome Mapping/methods , DNA Primers , Genetic Loci , Genetic Markers/genetics , Genotype
2.
Genetika ; 46(8): 1079-85, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20873204

ABSTRACT

Inter-simple sequence repeat (ISSR) amplification was used to analyze polymorphisms of microsatellite sequences in the honeysuckle genome and to evaluate genetic diversity among fourteen Polish and Russian blue honeysuckle accessions (Lonicera caerulea var. edulis, L. caerulea no. 7661, L. caerulea no. 7987, Jolanta, Atut, Wojtek, Czarna, Zielona, Dlinnoplodna, Czelabinka, Signoglazka, N1, N2 and A). The plant material was selected from the Department of Pomology, the Dendrological Garden in Rogowo (Poland), and breeder collections. A total of 40 primers, containing different simple sequence repeat motifs, were tested for amplification. Out of the 40 primers, only 11 gave interpretable banding patterns in all blue honeysuckle accessions. A total of 129 ISSR loci were amplified, of which 83 (64%) were polymorphic and 24 (19%) accession-specific. ISSR-PCR with genomic DNA from blue honeysuckle yielded DNA fragments ranging from 260 to 3250 bp in size. UPGMA cluster analysis with bootstrapping (1.000 replications) and used to construct a dendrogram and to estimate the genetic distances between Lonicera accessions. The ISSR-based phylogeny was consistent with Lonicera caerulea origin based on morphological and phenological evidence. The phylogenetic relationships based on the accession studies and the breeding usefulness are discussed.


Subject(s)
Lonicera/genetics , DNA, Plant/genetics , Lonicera/classification , Microsatellite Repeats , Phylogeny , Poland , Polymorphism, Genetic , Russia , Species Specificity
3.
Genetika ; 46(7): 923-31, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20795496

ABSTRACT

The aim of the study was to determine the genetic variability in eight apple cultivars: Delikates, Cortland, James Grieve, Lired, Jonathan, Golden Delicious, Jonagold and Idared from the collection of Fruit Growing Research Station in Rajkowo of the West Pomeranian University of Technology, Szczecin. The cultivar Delikates was obtained from the crossing of two cultivars: Cortland and James Grieve, whereas cultivar Lired is a James Grieve's sport. The second one cultivar--Jonagold was obtained from the crossing of Jonathan and Golden Delicious. The cultivar Idared is a hybrid obtained from the crossing of Jonathan and Wagener. Out of 40 primers, 17 were chosen for the final study. Those amplified a total of 183 loci (872 amplicons) out of which 34 (18.5%) were monomorphic, 128 (69.5%) were polymorphic and 22 (12%) cultivar-specific. Specific ISSR products were detected for each apple cultivar. A dendrogram was constructed using the UPGMA method which revealed two distinct clusters: I--Delikates, Cortland, James Grieve and Lired, II--Jonathan, Golden Delicious, Jonagold and Idared. Genetic similarity between Delikates, Cortland and James Grieve was 68.6, 70.8%, respectively and between cultivar Jonagold, Jonathan and Golden Delicous was 79.8, 85.2%, respectively.


Subject(s)
Crosses, Genetic , Malus/genetics , Polymerase Chain Reaction/methods , Polymorphism, Genetic , Phylogeny
4.
J Nanosci Nanotechnol ; 5(2): 204-8, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15853138

ABSTRACT

A novel, artificial neural network-based method is now available for obtaining the mean diameter of single wall carbon nanotube (SWCNT) samples from the diameter dispersive features of their Raman G-band. The method is demonstrated here for six different diameter SWCNT samples and 14 different excitation wavelengths. With an adequately large pool of standard nanotube samples, the suggested method is a useful complementary technique for SWCNT diameter analysis as it is capable of rapid diameter evaluation without prior knowledge of the relevant phonon dispersion relations.


Subject(s)
Artificial Intelligence , Carbon/chemistry , Nanotubes, Carbon/chemistry , Neural Networks, Computer , Spectrum Analysis, Raman , Feasibility Studies , Nanotechnology/methods
5.
Chir Narzadow Ruchu Ortop Pol ; 61(4): 361-4, 1996.
Article in Polish | MEDLINE | ID: mdl-8974852

ABSTRACT

Arthroscopy allows for noninvasive management for certain lesions resulting from traumatic anterior dislocation of the shoulder. Primary reconstruction of the labrum and ligamentous complex prevents recurrence of the dislocation. Encouraging results after arthroscopic procedures make them an attractive alternative for traditional conservative management.


Subject(s)
Arthroscopy/methods , Shoulder Dislocation/therapy , Adolescent , Adult , Aged , Female , Humans , Male , Middle Aged , Recurrence , Treatment Outcome
6.
Chir Narzadow Ruchu Ortop Pol ; 61(6): 527-30, 1996.
Article in Polish | MEDLINE | ID: mdl-9102236

ABSTRACT

Landsiedl arthroscopic capsuloligamentous reconstruction in treatment for recurrent anterior dislocation of the shoulder has been performed in 48 patients with follow-up between 6 months and 3 years. High efficacy and insignificant invasiveness make the method attractive. The success is secured by precise location of the canal for sutures within the neck of the scapula. It should be located in the original attachment of the lower glenohumeral ligament.


Subject(s)
Arthroscopy/methods , Shoulder Dislocation/surgery , Adolescent , Adult , Female , Follow-Up Studies , Humans , Male , Middle Aged , Recurrence
7.
Am J Physiol ; 254(1 Pt 2): H181-6, 1988 Jan.
Article in English | MEDLINE | ID: mdl-3337254

ABSTRACT

We describe a new combination of techniques for measurements of systemic blood pressure, central venous pressure, pulmonary arterial (PA) pressure, PA wedge pressure, and cardiac output in the rat. Application of the method to the conscious rat in a septic shock (Escherichia coli endotoxin iv injection) model demonstrated a response pattern of decreased cardiac output and stroke volume, increased total peripheral vascular resistance and heart rate, and transiently decreased systemic arterial pressure. In the pulmonary circulation, a very brief hypertension and a sustained increase in pulmonary vascular resistance were observed, but changes in PA wedge pressure were small. The soft PA catheter (0.3 mm ID, 0.6 mm OD) had no undue effects on cardiovascular function. We suggest that this combined technique could be useful for many cardiovascular studies in the rat, not only as related to shock research.


Subject(s)
Cardiovascular System/physiopathology , Sepsis/physiopathology , Animals , Blood Pressure , Cardiac Output , Heart Rate , Hemodynamics , Male , Pulmonary Circulation , Pulmonary Wedge Pressure , Rats , Rats, Inbred Strains , Vascular Resistance
9.
Acta Anaesthesiol Scand ; 31(5): 430-7, 1987 Jul.
Article in English | MEDLINE | ID: mdl-3307267

ABSTRACT

To investigate the interplay between endotoxin-induced circulatory shock and the cardiovascular effects of different doses of isoflurane, mean aortic pressure (MAP), central venous pressure (CVP), mean pulmonary arterial pressure (MPAP), heart rate (HR), cardiac output and superior mesenteric artery flow (SMAF), were monitored in rats anesthetized with either 1.4% or 2.0% isoflurane in oxygen. Cardiac index (Cl), total peripheral vascular resistance (TPR) and superior mesenteric vascular resistance (SMVR) were derived. During continuous administration of isoflurane, endotoxin (LD90, 40 mg X kg-1 iv) was given after a 30-min baseline period, and data were collected for an additional 2-h period. Sham-challenged (saline) animals served as controls. The response to endotoxin in the systemic circulation showed a decrease in Cl and MAP, while HR and TPR increased. MPAP and CVP were essentially unchanged. There were no significant differences in the systemic circulation variables between endotoxin groups, apart from a more pronounced HR increase during 1.4% isoflurane. Regionally, however, SMAF was lower and SMVR was higher in the 2.0% versus the 1.4% isoflurane group following endotoxin. To conclude, the degree of mesenteric vasoconstriction during endotoxemia was dependent on the dose of isoflurane. This dose-related effect seems to be mediated through interaction with intrinsic vascular control, a higher dose allowing a more pronounced local blood flow reduction.


Subject(s)
Endotoxins/pharmacology , Escherichia coli , Isoflurane/pharmacology , Splanchnic Circulation/drug effects , Vasoconstriction/drug effects , Animals , Blood/metabolism , Blood Circulation/drug effects , Central Venous Pressure/drug effects , Dose-Response Relationship, Drug , Male , Portal Vein , Pulmonary Circulation/drug effects , Rats , Rats, Inbred Strains , Venous Pressure/drug effects
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