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1.
Dev Dyn ; 240(4): 745-54, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21360786

ABSTRACT

mab21l1 and mab21l2 paralogs have widespread and dynamic expression patterns during vertebrate development. Both genes are expressed in the developing eye, midbrain, neural tube, and branchial arches. Our goal was to identify promoter regions with activity in mab21l2 expression domains. Assays of mab21l2 promoter-EGFP constructs in zebrafish embryos confirm that constructs containing 7.2 or 4.9 kb of mab21l2 promoter region are sufficient to drive expression in known (e.g., tectum, branchial arches) and unexpected domains (e.g., lens and retinal amacrine cells). A comparative analysis identifies complementary and novel expression domains of endogenous mab21l2 (e.g., lens and ventral iridocorneal canal) and mab21l1 (e.g., retinal amacrine and ganglion cells). Interestingly, therefore, despite the absence of conserved non-coding elements, a 4.9-kb mab21l2 promoter is sufficient to recapitulate expression in tissues unique to mab21l1 or mab21l2.


Subject(s)
Conserved Sequence , Homeodomain Proteins/genetics , Promoter Regions, Genetic , Zebrafish Proteins/genetics , Zebrafish/genetics , Amacrine Cells/metabolism , Amacrine Cells/physiology , Animals , Animals, Genetically Modified , Base Sequence , Embryo, Nonmammalian , Eye/embryology , Eye/metabolism , Gene Expression Regulation, Developmental , Homeodomain Proteins/metabolism , Homeodomain Proteins/physiology , Molecular Sequence Data , Sequence Homology, Nucleic Acid , Tissue Distribution , Transgenes , Zebrafish/metabolism , Zebrafish Proteins/metabolism , Zebrafish Proteins/physiology
2.
J Biol Chem ; 283(16): 10881-91, 2008 Apr 18.
Article in English | MEDLINE | ID: mdl-18272521

ABSTRACT

The alpha subunit of cone transducin (TalphaC) is expressed exclusively in cone photoreceptors of the eye and pineal. TalphaCisakey phototransduction protein, and inherited mutations in TalphaC cause total color blindness in humans. We use transgenic zebrafish to identify and characterize cone photoreceptor regulatory element 1 (CPRE-1) a novel 20-bp enhancer element in the TalphaC promoter (TalphaCP). CPRE-1 is located approximately 2.5 kb upstream of the translation start site and is necessary for strong cone photoreceptor-specific expression in vivo. CPRE-1 comprises of a modular arrangement of two 10-bp elements that have separate, but co-dependent transcriptional activities. In vitro, CPRE-1 specifically binds nuclear factors that are enriched in ocular tissue. Bioinformatic alignments reveal that CPRE-1 sites are evolutionarily conserved in the promoter regions of fish, rodent, and mammalian TalphaC orthologues and identify a 5'-CTGGAGTG(A/T)TGGA(G/A)GCAGGG(G/C)T-3' consensus sequence.


Subject(s)
Mutation , Retinal Cone Photoreceptor Cells/metabolism , Transducin/physiology , Animals , Animals, Genetically Modified , Base Sequence , Computational Biology , Enhancer Elements, Genetic , Evolution, Molecular , Green Fluorescent Proteins/metabolism , Molecular Sequence Data , Promoter Regions, Genetic , Sequence Homology, Nucleic Acid , Transducin/metabolism , Zebrafish
4.
Dev Biol ; 270(2): 336-49, 2004 Jun 15.
Article in English | MEDLINE | ID: mdl-15183718

ABSTRACT

Two alleles of an eyeless mutant, chokh (chk), were identified in ongoing zebrafish F(3) mutagenesis screens. Morphologically, chk mutants can be identified at 15 h post-fertilization by the failure of optic primordia to evaginate from the forebrain. The chk phenotype appears specific, as marker genes in the forebrain, midbrain, and pineal are expressed in normal temporal, spatial, and circadian patterns. Sequence analysis of the chk alleles revealed nonsense or missense mutations in the rx3 homeobox. Rx genes encode paired-type homeodomain transcription factors known to be key regulators of eye development in mouse, medaka, Xenopus, and zebrafish. To uncover novel Rx targets, we analyzed the expression of multiple eye development genes in chk. We find that expression of mab21l2, mab21l1 and rx2 are specifically absent in the eye field of chk embryos. Knockdown of Mab21l2 by antisense morpholino microinjections partially phenocopies the rx3 mutation, leading to microphthalmia, incomplete eye maturation, and dramatic increases in apoptotic eye progenitors. We propose that mab21l2 is an early downstream effector of rx3 and is critical for survival of eye progenitors.


Subject(s)
Eye/embryology , Gene Expression Regulation, Developmental , Homeodomain Proteins/genetics , Phenotype , Zebrafish/embryology , Animals , Chromosome Mapping , Crosses, Genetic , DNA, Complementary/genetics , Homeodomain Proteins/metabolism , Immunohistochemistry , In Situ Hybridization , In Situ Nick-End Labeling , Microinjections , Morphogenesis , Mutation/genetics , Oligonucleotides , Polymorphism, Single-Stranded Conformational , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA , Transcription Factors/genetics , Transcription Factors/metabolism , Zebrafish Proteins
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