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1.
J Mol Model ; 26(5): 110, 2020 Apr 27.
Article in English | MEDLINE | ID: mdl-32342185

ABSTRACT

The indiscriminate use of pesticides has caused several damages to the environment, in particular the pollution of water reservoirs, so that this has motivated the development of techniques to minimize its consequences. One of the main surface water pollutants is glyphosate, which is a widely used herbicide for weed control. Therefore, in this work, computational simulations were used with density functional theory and molecular dynamics to theoretically verify if C60 fullerene is capable of adsorbing glyphosate in aqueous media. As a result, we showed through the adsorption energies, molecular dynamics methods, and infrared absorption that C60 can adsorb glyphosate molecules in at least three distinct configurations, either in vacuum or in water, which theoretically indicates it as a good candidate for removal of this herbicide from water by nanotechnology techniques.

2.
Mycologia ; 101(3): 401-16, 2009.
Article in English | MEDLINE | ID: mdl-19537213

ABSTRACT

Nine species of fungi on the aquatic weed Sagittaria montevidensis (arrowhead) in southern and southeastern Brazil were collected, identified, described and illustrated in a survey for possible biological control agents against this weed. Seven of them are anamorphic fungi, Alternaria alternata, Botrytis cinerea, Cercospora apii, Cercospora sagittariae, Colletotrichum gloeosporioides, Plectosporium alismatis and Pseudocercospora arthrospora, and two smut fungi, Doassansiopsis deformans and Narasimhania alismatis. All represent new host records or new geographic localities for occurrences of the fungi. Pseudocercospora arthrospora is new to science. It differs from known species of genus Pseudocercospora mainly by its subhyaline and disarticulating conidia and host. This fungus is close to Thedgonia but can be distinguished for this genus by its conidiogenesis. Based on the description and disease symptoms Cylindrocarpon sagittariae, recorded on S. trifolia from Japan, is regarded here as a later synonym of Plectosporium alismatis. Preliminary observations of the fungi in the field and in culture suggest that four of these have potential for use as biocontrol agents against S. montevidensis, namely C. sagittariae, C. gloeosporioides, P. alismatis and P. arthrospora.


Subject(s)
Fungi/classification , Fungi/isolation & purification , Plant Diseases/microbiology , Sagittaria/microbiology , Alternaria/classification , Alternaria/isolation & purification , Alternaria/physiology , Ascomycota/classification , Ascomycota/isolation & purification , Ascomycota/physiology , Basidiomycota/classification , Basidiomycota/isolation & purification , Basidiomycota/physiology , Botrytis/classification , Botrytis/isolation & purification , Botrytis/physiology , Brazil , Colletotrichum/classification , Colletotrichum/isolation & purification , Colletotrichum/physiology , Ecosystem , Fungi/physiology , Geography , Pest Control, Biological/methods , Species Specificity , Water Microbiology
3.
Biochem Soc Trans ; 32(Pt 2): 227-30, 2004 Apr.
Article in English | MEDLINE | ID: mdl-15046577

ABSTRACT

Structures, stability and DNA-binding properties have been established for archaeal histones from mesophiles, thermophiles and hyperthermophiles. Most archaeal histones are simply histone folds that are stabilized by dimer formation. Archaeal histones and the histone folds of the eukaryotic nucleosome core histones share a common ancestry and bind and wrap DNA similarly using conserved residues. The histone-fold residues that stabilize dimer-dimer interactions within an archaeal histone core contribute to determining archaeal histone-DNA affinity.


Subject(s)
Archaea/genetics , Archaea/physiology , DNA/chemistry , Histones/metabolism , Amino Acid Sequence , Archaea/chemistry , Circular Dichroism , Dimerization , Histones/chemistry , Hot Temperature , Models, Molecular , Molecular Sequence Data , Nucleosomes/chemistry , Protein Denaturation , Protein Folding , Protein Structure, Secondary , Sequence Homology, Amino Acid
4.
J Mol Biol ; 297(1): 39-47, 2000 Mar 17.
Article in English | MEDLINE | ID: mdl-10704305

ABSTRACT

Site-specific mutagenesis of the hmfB gene cloned from the archaeon Methanothermus fervidus, followed by expression in Escherichia coli, has been used to generate approximately 90 recombinant (r) variants of the archaeal histone HMfB. The abilities of these variants to form stable archaeal nucleosome-containing complexes with linear pBR322 DNA, and with an 89 bp restriction fragment of this DNA have been determined. Variants that failed to form such complexes, based on negative gel-shift assays, had substitutions at the N terminus or within the alpha1, L1 and L2 regions of the rHMfB histone fold, at sites predicted to be homologous to eucaryal histone fold residues that contact the DNA in the eucaryal nucleosome. Variants that failed to give gel shifts were further assayed for their abilities to facilitate ligase-catalyzed circularization of a linear 88 bp DNA molecule, and to reduce the ellipticity of a DNA solution at 275 nm (theta(275)). Consistent with cooperative but independent sites of DNA binding, a combination of three residue substitutions, one each in alpha1, L1 and L2, was required to generate a rHMfB variant with no detectable DNA binding based on gel shift, circularization and theta(275) reduction assays.


Subject(s)
Archaeal Proteins/metabolism , DNA/metabolism , Histones/metabolism , Methanobacteriales/genetics , Mutation/genetics , Allosteric Site , Amino Acid Sequence , Amino Acid Substitution/genetics , Archaeal Proteins/chemistry , Archaeal Proteins/genetics , Archaeal Proteins/isolation & purification , Circular Dichroism , DNA/chemistry , DNA/genetics , DNA Ligases/metabolism , DNA, Circular/chemistry , DNA, Circular/genetics , DNA, Circular/metabolism , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , DNA-Binding Proteins/isolation & purification , DNA-Binding Proteins/metabolism , Electrophoresis , Genes, Archaeal/genetics , Genetic Variation/genetics , Histones/chemistry , Histones/genetics , Histones/isolation & purification , Methanobacteriales/chemistry , Models, Molecular , Molecular Sequence Data , Protein Binding , Protein Folding , Protein Structure, Secondary , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Sequence Alignment
5.
Lepr Rev ; 66(3): 210-3, 1995 Sep.
Article in English | MEDLINE | ID: mdl-7500815

ABSTRACT

Many leprosy patients treated with multidrug therapy (MDT) had previously received dapsone (DDS) monotherapy for many years. We report here 2 such patients treated with modified paucibacillary MDT composed of rifampicin and DDS who subsequently relapsed with multibacillary leprosy 5 and 6 years after release from treatment. Isolates of Mycobacterium leprae from both patients were resistant to DDS but sensitive to rifampicin, suggesting that the relapses were caused by rifampicin sensitive 'persister' organisms. The implications of this for surveillance of patients released from treatment (RFT) and the management of relapsed patients is discussed.


Subject(s)
Dapsone/therapeutic use , Leprostatic Agents/therapeutic use , Leprosy/drug therapy , Mycobacterium leprae/drug effects , Rifampin/therapeutic use , Adult , Drug Resistance, Microbial , Drug Therapy, Combination , Female , Humans , Male , Recurrence
6.
Lepr Rev ; 65(4): 385-95, 1994 Dec.
Article in English | MEDLINE | ID: mdl-7861924

ABSTRACT

There are several indications when to use splints in the treatment of leprosy. PVC waterpipe is a cheap and easily available material in developing countries. Its advantages, indications, and the manufacturing of splints are described.


Subject(s)
Leprosy/rehabilitation , Splints , Equipment Design , Humans , Leprosy/therapy , Nepal , Polyvinyl Chloride , Splints/standards
7.
Lepr Rev ; 65(4): 300-4, 1994 Dec.
Article in English | MEDLINE | ID: mdl-7861916

ABSTRACT

This study was carried out to assess the role PGL-1 antibodies may have to play in assisting with early diagnosis in close contacts of leprosy patients. Blood samples were collected from patients and contacts. It was found that 6.9% of index cases and 1% of healthy contacts were positive for PGL-1 antibody. None of the healthy contacts developed clinical leprosy and all had become seronegative at follow-up. We conclude that screening for PGL-1 antibodies has a limited role in the screening of healthy contacts and may not be of use in low endemic areas.


Subject(s)
Antigens, Bacterial , Disease Transmission, Infectious , Glycolipids/blood , Leprosy/diagnosis , Leprosy/transmission , Adult , Child , Female , Humans , Leprosy/immunology , Male , Nepal , Serologic Tests
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