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1.
Leukemia ; 35(5): 1267-1278, 2021 05.
Article in English | MEDLINE | ID: mdl-33531656

ABSTRACT

Children of Hispanic/Latino ancestry have increased incidence of high-risk B-cell acute lymphoblastic leukemia (HR B-ALL) with poor prognosis. This leukemia is characterized by a single-copy deletion of the IKZF1 (IKAROS) tumor suppressor and increased activation of the PI3K/AKT/mTOR pathway. This identifies mTOR as an attractive therapeutic target in HR B-ALL. Here, we report that IKAROS represses MTOR transcription and IKAROS' ability to repress MTOR in leukemia is impaired by oncogenic CK2 kinase. Treatment with the CK2 inhibitor, CX-4945, enhances IKAROS activity as a repressor of MTOR, resulting in reduced expression of MTOR in HR B-ALL. Thus, we designed a novel therapeutic approach that implements dual targeting of mTOR: direct inhibition of the mTOR protein (with rapamycin), in combination with IKAROS-mediated transcriptional repression of the MTOR gene (using the CK2 inhibitor, CX-4945). Combination treatment with rapamycin and CX-4945 shows synergistic therapeutic effects in vitro and in patient-derived xenografts from Hispanic/Latino children with HR B-ALL. These data suggest that such therapy has the potential to reduce the health disparity in HR B-ALL among Hispanic/Latino children. The dual targeting of oncogene transcription, combined with inhibition of the corresponding oncoprotein provides a paradigm for a novel precision medicine approach for treating hematological malignancies.


Subject(s)
Antineoplastic Agents/therapeutic use , B-Lymphocytes/drug effects , Precursor Cell Lymphoblastic Leukemia-Lymphoma/drug therapy , TOR Serine-Threonine Kinases/genetics , Casein Kinase II/genetics , Cell Line , Cell Line, Tumor , Child , Gene Expression Regulation, Leukemic/drug effects , Genes, Tumor Suppressor/drug effects , HEK293 Cells , Humans , Naphthyridines/pharmacology , Phenazines/pharmacology , Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics , Signal Transduction/drug effects
2.
Int J Mol Sci ; 22(2)2021 Jan 15.
Article in English | MEDLINE | ID: mdl-33467550

ABSTRACT

IKAROS, encoded by the IKZF1 gene, is a DNA-binding protein that functions as a tumor suppressor in T cell acute lymphoblastic leukemia (T-ALL). Recent studies have identified IKAROS's novel function in the epigenetic regulation of gene expression in T-ALL and uncovered many genes that are likely to be directly regulated by IKAROS. Here, we report the transcriptional regulation of two genes, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta (PIK3CD) and phosphoinositide kinase, FYVE-type zinc finger containing (PIKFYVE), by IKAROS in T-ALL. PIK3CD encodes the protein p110δ subunit of phosphoinositide 3-kinase (PI3K). The PI3K/AKT pathway is frequently dysregulated in cancers, including T-ALL. IKAROS binds to the promoter regions of PIK3CD and PIKFYVE and reduces their transcription in primary T-ALL. Functional analysis demonstrates that IKAROS functions as a transcriptional repressor of both PIK3CD and PIKFYVE. Protein kinase CK2 (CK2) is a pro-oncogenic kinase that is overexpressed in T-ALL. CK2 phosphorylates IKAROS, impairs IKAROS's DNA-binding ability, and functions as a repressor of PIK3CD and PIKFYVE. CK2 inhibition results in increased IKAROS binding to the promoters of PIK3CD and PIKFYVE and the transcriptional repression of both these genes. Overall, the presented data demonstrate for the first time that in T-ALL, CK2 hyperactivity contributes to PI3K signaling pathway upregulation, at least in part, through impaired IKAROS transcriptional regulation of PIK3CD and PIKFYVE. Targeting CK2 restores IKAROS's regulatory effects on the PI3K oncogenic signaling pathway.


Subject(s)
Casein Kinase II/genetics , Class I Phosphatidylinositol 3-Kinases/genetics , Gene Expression Regulation, Leukemic , Ikaros Transcription Factor/genetics , Phosphatidylinositol 3-Kinases/genetics , Precursor T-Cell Lymphoblastic Leukemia-Lymphoma/genetics , Casein Kinase II/antagonists & inhibitors , Casein Kinase II/metabolism , Cell Line, Tumor , Chromatin Assembly and Disassembly/genetics , Class I Phosphatidylinositol 3-Kinases/metabolism , HEK293 Cells , Humans , Ikaros Transcription Factor/metabolism , Naphthyridines/pharmacology , Phenazines/pharmacology , Phosphatidylinositol 3-Kinases/metabolism , Phosphorylation/drug effects , Precursor T-Cell Lymphoblastic Leukemia-Lymphoma/metabolism , Promoter Regions, Genetic/genetics , Protein Binding , Signal Transduction/genetics
3.
Adv Biol Regul ; 75: 100665, 2020 01.
Article in English | MEDLINE | ID: mdl-31623972

ABSTRACT

Alterations in normal regulation of gene expression is one of the key features of hematopoietic malignancies. In order to gain insight into the mechanisms that regulate gene expression in these diseases, we dissected the role of the Ikaros protein in leukemia. Ikaros is a DNA-binding, zinc finger protein that functions as a transcriptional regulator and a tumor suppressor in leukemia. The use of ChIP-seq, RNA-seq, and ATAC-seq-coupled with functional experiments-revealed that Ikaros regulates both the global epigenomic landscape and epigenetic signature at promoter regions of its target genes. Casein kinase II (CK2), an oncogenic kinase that is overexpressed in leukemia, directly phosphorylates Ikaros at multiple, evolutionarily-conserved residues. Phosphorylation of Ikaros impairs the protein's ability to regulate both the transcription of its target genes and global epigenetic landscape in leukemia. Treatment of leukemia cells with a specific inhibitor of CK2 restores Ikaros function, resulting in cytotoxicity of leukemia cells. Here, we review the mechanisms through which the CK2-Ikaros signaling axis regulates the global epigenomic landscape and expression of genes that control cellular proliferation in leukemia.


Subject(s)
Epigenesis, Genetic , Gene Expression Regulation, Leukemic , Hematologic Neoplasms , Leukemia , Neoplasm Proteins , Signal Transduction , Cell Proliferation , Hematologic Neoplasms/genetics , Hematologic Neoplasms/metabolism , Hematologic Neoplasms/pathology , Humans , Leukemia/genetics , Leukemia/metabolism , Leukemia/pathology , Neoplasm Proteins/genetics , Neoplasm Proteins/metabolism
4.
PLoS One ; 14(8): e0221570, 2019.
Article in English | MEDLINE | ID: mdl-31465423

ABSTRACT

Industrial activities have a detrimental impact on the environment and health when high concentrations of pollutants are released. Phytoremediation is a natural method of utilizing plants to remove contaminants from the soil. The goal of this study was to investigate the ability of Cannabis sativa L. to sustainably grow and remediate abandoned coal mine land soils in Pennsylvania. In this study, six different varieties of industrial hemp (Fedora 17, Felina 32, Ferimon, Futura 75, Santhica 27, and USO 31) were grown on two different contaminated soil types and two commercial soils (Miracle-Gro Potting Mix and PRO-MIX HP Mycorrhizae High Porosity Grower Mix). Plants growing in all soil types were exposed to two environmental conditions (outside and in the greenhouse). Seed germination response and plant height indicated no significant differences among all hemp varieties grown in different soils, however on an average, the height of the plants grown in the greenhouse exceeded that of the plants grown outdoors. In addition, heavy metal analysis of Arsenic, Lead, Nickel, Mercury, and Cadmium was performed. The concentration of Nickel was 2.54 times greater in the leaves of hemp grown in mine land soil outdoors when compared to greenhouse conditions. No differences were found between expression of heavy metal transporter genes. Secondary metabolite analysis of floral buds from hemp grown in mine land soil displayed a significant increase in the total Cannabidiol content (2.16%, 2.58%) when compared to Miracle-Gro control soil (1.08%, 1.6%) for outdoors and in the greenhouse, respectively. Molecular analysis using qRT-PCR indicated an 18-fold increase in the expression of the cannabidiolic acid synthase gene in plants grown on mine land soil. The data indicates a high tolerance to heavy metals as indicated from the physiological and metabolites analysis.


Subject(s)
Adaptation, Biological , Cannabinoids/biosynthesis , Cannabis/physiology , Soil , Analysis of Variance , Environment , Gene Expression Regulation, Plant , Gene-Environment Interaction , Germination , Hydrogen-Ion Concentration , Metals, Heavy/analysis , Metals, Heavy/chemistry , Metals, Heavy/metabolism , Plant Breeding , Secondary Metabolism , Seeds , Soil/chemistry , Soil Pollutants
5.
Am J Audiol ; 27(1): 57-66, 2018 Mar 08.
Article in English | MEDLINE | ID: mdl-29234782

ABSTRACT

PURPOSE: This study screens for deafness gene mutations in newborns in the Northwest China population. METHOD: The 9 sites of 4 common deafness genes (GJB2, GJB3, SLC26A4, and mt 12S rRNA) were detected by bloodspot-based gene chip array in 2,500 newborns. RESULTS: We detected mutations of the 4 genes in 101 (4.04%) newborns; particularly, 0.20% detected the double mutations. In the Hui population, 4.58% of the newborns tested positive for mutations, whereas 4.01% of Han newborns tested positive for mutations. The detective rates are as follows: 1.44% for GJB2 235delC, 1.08% for SLC26A4 IVS7-2A>G, 0.48% for GJB2 299_300delAT, 0.28% for SLC26A4 2168A>G, 0.2% for mt 12S rRNA 1555A>G, and 0.16% for GJB3 538C>T. The 31.25% (5/16) of infants with GJB2 235delC, 50% (3/6) with GJB2 299_300delAT, and 25% (3/12) with SLC26A4 IVS7-2A>G showed abnormal hearing when tested; only 1 double mutation case received the hearing test, and this infant showed abnormality in both ears on the hearing test. CONCLUSIONS: High mutation rates in the common deafness genes were detected in newborns in Northwest China. Our study is helpful in understanding the deafness genomic epidemiology and also provides evidence for prenatal and postnatal care as well as policy making on population health in the region.


Subject(s)
Connexins/genetics , DNA Mutational Analysis , Deafness/genetics , Genetic Predisposition to Disease/epidemiology , Neonatal Screening/organization & administration , China/epidemiology , Deafness/diagnosis , Dried Blood Spot Testing/methods , Female , Genetic Variation , Hearing Tests/methods , Humans , Infant, Newborn , Male , Membrane Transport Proteins/genetics , Oligonucleotide Array Sequence Analysis/methods , RNA, Ribosomal/genetics , Reproducibility of Results , Sulfate Transporters
7.
Adv Biol Regul ; 65: 16-25, 2017 08.
Article in English | MEDLINE | ID: mdl-28623166

ABSTRACT

Signaling networks that regulate cellular proliferation often involve complex interactions between several signaling pathways. In this manuscript we review the crosstalk between the Casein Kinase II (CK2) and Glycogen Synthase Kinase-3 (GSK-3) pathways that plays a critical role in the regulation of cellular proliferation in leukemia. Both CK2 and GSK-3 are potential targets for anti-leukemia treatment. Previously published data suggest that CK2 and GSK-3 act synergistically to promote the phosphatidylinositol-3 kinase (PI3K) pathway via phosphorylation of PTEN. More recent data demonstrate another mechanism through which CK2 promotes the PI3K pathway - via transcriptional regulation of PI3K pathway genes by the newly-discovered CK2-Ikaros axis. Together, these data suggest that the CK2 and GSK-3 pathways regulate AKT/PI3K signaling in leukemia via two complementary mechanisms: a) direct phosphorylation of PTEN and b) transcriptional regulation of PI3K-promoting genes. Functional interactions between CK2, Ikaros and GSK3 define a novel signaling network that regulates proliferation of leukemia cells. This regulatory network involves both direct posttranslational modifications (by CK and GSK-3) and transcriptional regulation (via CK2-mediated phosphorylation of Ikaros). This information provides a basis for the development of targeted therapy for leukemia.


Subject(s)
Casein Kinase II/genetics , Gene Expression Regulation, Leukemic , Glycogen Synthase Kinase 3/genetics , Ikaros Transcription Factor/genetics , Leukemia/genetics , Antineoplastic Agents/therapeutic use , Casein Kinase II/metabolism , Glycogen Synthase Kinase 3/metabolism , Humans , Ikaros Transcription Factor/metabolism , Leukemia/diagnosis , Leukemia/drug therapy , Leukemia/mortality , PTEN Phosphohydrolase/genetics , PTEN Phosphohydrolase/metabolism , Phosphatidylinositol 3-Kinases/genetics , Phosphatidylinositol 3-Kinases/metabolism , Phosphorylation , Prognosis , Signal Transduction , Survival Analysis
8.
J Biol Chem ; 292(3): 898-911, 2017 01 20.
Article in English | MEDLINE | ID: mdl-27920205

ABSTRACT

Transient receptor potential canonical type 5 (TRPC5) is a Ca2+-permeable cation channel that is highly expressed in the brain and is implicated in motor coordination, innate fear behavior, and seizure genesis. The channel is activated by a signal downstream of the G-protein-coupled receptor (GPCR)-Gq/11-phospholipase C (PLC) pathway. In this study we aimed to identify the molecular mechanisms involved in regulating TRPC5 activity. We report that Arg-593, a residue located in the E4 loop near the TRPC5 extracellular Gd3+ binding site, is critical for conferring the sensitivity to GPCR-Gq/11-PLC-dependent gating on TRPC5. Indeed, guanosine 5'-O-(thiotriphosphate) and GPCR agonists only weakly activate the TRPC5R593A mutant, whereas the addition of Gd3+ rescues the mutant's sensitivity to GPCR-Gq/11-PLC-dependent gating. Computer modeling suggests that Arg-593 may cross-bridge the E3 and E4 loops, forming the "molecular fulcrum." While validating the model using site-directed mutagenesis, we found that the Tyr-542 residue is critical for establishing a functional Gd3+ binding site, the Tyr-541 residue participates in fine-tuning Gd3+-sensitivity, and that the Asn-584 residue determines Ca2+ permeability of the TRPC5 channel. This is the first report providing molecular insights into the molecular mechanisms regulating the sensitivity to GPCR-Gq/11-PLC-dependent gating of a receptor-operated channel.


Subject(s)
Calcium Signaling/physiology , GTP-Binding Protein alpha Subunits, Gq-G11/metabolism , Gadolinium/pharmacokinetics , Ion Channel Gating/physiology , Models, Biological , TRPC Cation Channels/metabolism , Type C Phospholipases/metabolism , Amino Acid Substitution , Animals , Calcium Signaling/drug effects , GTP-Binding Protein alpha Subunits, Gq-G11/genetics , HEK293 Cells , Humans , Ion Channel Gating/drug effects , Mice , Mutagenesis, Site-Directed , Mutation, Missense , Receptors, G-Protein-Coupled/genetics , Receptors, G-Protein-Coupled/metabolism , TRPC Cation Channels/genetics , Type C Phospholipases/genetics
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