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1.
Langmuir ; 40(27): 13844-13859, 2024 Jul 09.
Article in English | MEDLINE | ID: mdl-38916256

ABSTRACT

Fullerene-based biosensors have received great attention due to their unique electronic properties that allow them to transduce electrical signals by accepting electrons from amino acids. Babies with MSUD (maple syrup urine disease) are unable to break down amino acids such as l-leucine, and excess levels of the l-leucine are harmful. Therefore, sensing of l-leucine is foremost required. We aim to investigate the interaction tendencies of size-variable fullerenes (CX; X = 24, 36, 50, and 70) toward l-leucine (LEU) using density functional theory (DFT-D3) and classical molecular dynamics (MD) simulation. The C24 fullerene shows the highest affinity of the LEU biomolecule in the gas phase. Smaller fullerenes (C24 and C36) show stronger interactions with leucine due to their higher curvature in water environments. Moreover, recovery times in the ranges of 1010 and 104 s make it a viable candidate for the isolation application of LEU from the biological system. Further, the interaction between LEU and fullerenes is in line with the natural bond order (NBO) analysis, Mulliken charge analysis, quantum theory atom in molecule (QTAIM) analysis, and reduced density gradient (RDG) analysis. At 310 K, employing the explicit water model in classical MD simulations, fullerenes C24 and C36 demonstrate notably elevated binding free energies (-24.946 kJ/mol) in relation to LEU, showcasing their potential as sensors for l-leucine. Here, we demonstrate that the smaller fullerene exhibits a higher potential for l-leucine sensors than the larger fullerene.


Subject(s)
Density Functional Theory , Fullerenes , Leucine , Molecular Dynamics Simulation , Fullerenes/chemistry , Leucine/chemistry , Particle Size
2.
Sci Rep ; 14(1): 4371, 2024 Feb 22.
Article in English | MEDLINE | ID: mdl-38388641

ABSTRACT

Transition metal oxides (TMO) are the preferred materials for metal ion battery cathodes because of their high redox potentials and good metal-ion intercalation capacity, which serve as an outstanding replacement for layered sulphide. In this work, using first-principles calculations based on Density functional theory approach, we explored the structural and electronic properties which comprise of adsorption and diffusion behaviour along with the analysis of voltage profile and storage capacity of Ru doped two-dimensional transition metal oxide [Formula: see text], [Formula: see text], and [Formula: see text] monolayers. The adsorption of alkali ions (Li, Na) to the surface of TMOs is strengthened by Ru-atom doping. Ru doping enhanced the adsorption energy of Li/Na-ion by 25%/11% for [Formula: see text], 8%/13% for [Formula: see text], and 10%/11% [Formula: see text] respectively. The open circuit voltage (OCV) also increases due to the high adsorption capacity of doped Monolayers. Ru doping makes the semiconducting TMOs conduct, which is suitable for battery application. As alkali ion moves closer to the dopant site, the adsorption energy increases. When alkali ions are close to the vicinity of doping site, their diffusion barrier decrease and rises as they go further away. Our current findings will be useful in finding ways to improve the storage performance of 2D oxide materials for application in energy harvesting and green energy architecture.

3.
Sci Rep ; 13(1): 21551, 2023 Dec 06.
Article in English | MEDLINE | ID: mdl-38057362

ABSTRACT

First-principles methods have been employed here to calculate structural, electronic and optical properties of CsPbI3 and CsPbBr3, in monolayer and heterostructure (HS) (PbI2-CsBr (HS1), CsI-CsBr (HS2), CsI-PbBr2 (HS3) and PbI2-PbBr2 (HS4)) configurations. Imaginary frequencies are absent in phonon dispersion curves of CsPbI3 and CsPbBr3 monolayers which depicts their dynamical stability. Values of interfacial binding energies signifies stability of our simulated heterostructures. The CsPbI3 monolayer, CsPbBr3 monolayer, HS1, HS2, HS3 and HS4 possess direct bandgap of 2.19 eV, 2.73 eV, 2.41 eV, 2.11 eV, 1.88 eV and 2.07 eV, respectively. In the HS3, interface interactions between its constituent monolayers causes substantial decrease in its resultant bandgap which suggests its solar cell applications. Static dielectric constants of all simulated heterostructures are higher when compared to those of pristine monolayers which demonstrates that these heterostructures possess low charge carrier recombination rate. In optical absorption plots of materials, the plot of HS3 displayed a red shift and depicted absorption of a substantial part of visible spectrum. Later on, via Shockley-Queisser limit we have calculated solar cell parameters of all the reported structures. The calculations showed that HS2, HS3 and HS4 showcased enhanced power conversion efficiency compared to CsPbI3 and CsPbBr3 monolayers when utilized as an absorber layer in solar cells.

4.
Int J Biol Macromol ; 253(Pt 7): 127444, 2023 Dec 31.
Article in English | MEDLINE | ID: mdl-37839595

ABSTRACT

In this work, nanostructures comprising silver nanoparticles supported on a wrinkled chitosan matrix (Ag@Ch) were successfully synthesized by a simple aging process at room temperature for four days through self-assembly. Chitosan, a natural polysaccharide was used as a support as well as a reducing agent for the formation of Ag nanostructures and the creation of hotspots for SERS activity. The fabricated Ag@Ch nanostructures were characterized by several spectroscopic techniques and were used as a surface-enhanced Raman scattering (SERS) substrate. The effect of wet, dry, and liquid samples on the SERS enhancement has been studied and was found to be effective for sensing Methylene blue, Crystal Violet, and p-Nitrophenol with detection limits of 3.8, 8.1, and 8.2 ppb respectively. The SERS enhancement of the Ag@Ch was attributed to the combination of both electromagnetic (EM) and chemical effects (CE). Density functional theory (DFT) calculations were used to explain the observed surface enhancement. Good agreement was observed between the experimental and simulated spectra.


Subject(s)
Chitosan , Metal Nanoparticles , Nanostructures , Spectrum Analysis, Raman/methods , Silver/chemistry , Metal Nanoparticles/chemistry , Density Functional Theory , Nanostructures/chemistry
5.
Org Biomol Chem ; 21(39): 7917-7923, 2023 Oct 11.
Article in English | MEDLINE | ID: mdl-37642260

ABSTRACT

An interesting molecular architecture, butterflyene, resembling the shape of a butterfly has been synthesized via a sequence of cyclocondensation, benzylic oxidation, McMurry coupling and Diels-Alder reaction (DAR), successively. The DAR of the tetrasubstituted double bond of a bicyclopentylidene moiety with various dienes has been performed to prepare the analogues of butterflyene. DFT calculations have also been used to analyze the structural optimization and reaction energies.

6.
Phys Chem Chem Phys ; 22(35): 19823-19836, 2020 Sep 21.
Article in English | MEDLINE | ID: mdl-32845260

ABSTRACT

The catalyst assisted water-splitting method as an eco-friendly and cleaner pathway for energy generation has gained much interest in recent times. In this regard, numerous two-dimensional electrocatalysts such as mono/binary compounds synthesized from group IV, III-V and V elements with compatible activity towards hydrogen evolution, oxygen evolution, oxygen reduction and CO2 reduction have been reported. Motivated by the novel approach of material design and the need for better and cheaper electrocatalytic materials, we have investigated the ground state properties of the GeSb monolayer using state-of-the-art density functional theory. The computed electronic properties reveal the metallic nature of the pristine GeSb monolayer, indicating its potential for utilization as an electrocatalyst. The site-dependent catalytic response of the GeSb monolayer indicates that the Sb-site is more sensitive towards hydrogen adsorption amongst the considered sites. The computed adsorption and Gibbs free energies follow the trend of E < E < E. Finally, we have investigated the role of arsenic (As) and bismuth (Bi) doping on the catalytic activity of the GeSb monolayer. We notice that the electron density modulation occurs at the Sb-site due to incorporation of substitutional doping which results in a 72% enhancement in the catalytic activity of the monolayer on As substitution. The present study envisages that the electron density modulation can be utilized as a pathway for tailoring the catalytic activity of a system for the hydrogen evolution reaction.

7.
Spectrochim Acta A Mol Biomol Spectrosc ; 224: 117352, 2020 Jan 05.
Article in English | MEDLINE | ID: mdl-31344580

ABSTRACT

The detection and filtration of melamine in food products has become an emergence due to its harmful effect on humans. In present work, we have investigated the binding mechanism of melamine over carboxyl group edge-functionalized graphene quantum dots doped with oxygen and sulphur atoms (O-GQD and S-GQD). In order to monitor melamine, surface enhanced Raman scattering (SERS) is adopted which is an effective vibrational spectroscopic approach. Electronic and vibrational properties were analysed by means of well adapted density functional theory (DFT). The calculated adsorption energy of melamine over O-GQD and S-GQD is -1.18 and -0.15 eV respectively. The characteristic peak of melamine at 688 cm-1 is in good agreement with previously reported experimental work and enhances by 348.4% in SERS spectra of Mel-O-GQD and 48% in SERS spectra of Mel-S-GQD. We have calculated the chemical enhancement factor (EF) for melamine over O-GQD and S-GQD and found the enhancement of 4.51 and 1.48 which is greater than melamine­silver complexes. Our theoretical studies on SERS of melamine over O-GQD and S-GQD suggest that oxygen is a better candidate for SERS. Our work demonstrates that the graphene quantum dots are remarkable platforms for the detection of melamine.


Subject(s)
Graphite/chemistry , Quantum Dots/chemistry , Spectrum Analysis, Raman/methods , Triazines/analysis , Oxygen/chemistry , Triazines/chemistry
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