Classification of Cryptococcus neoformans and yeast-like fungus isolates from pigeon droppings by colony phenotyping and ITS genotyping and their seasonal variations in Korea.

Cryptococcus neoformans (C neoformans) is a frequent cause of invasive fungal disease in immunocompromised human hosts. Ninety-eight samples of pigeon droppings were collected from the pigeon shelters in Seoul, and cultured on birdseed agar (BSA) and Sabouraud dextrose agar (SDA). One hundred yeast-like colonies were selected and identified via phenotype characteristics, such as colony morphology and biochemical characteristics. This was then followed with genotyping via sequencing of the internal transcribed spacer (ITS) region. The colonies were classified into four kinds of colony color types: brown type (BrT), beige type (BeT), pink type (PT), and white type (WT). Numbers of isolated BrT, BeT, PT, and WT colonies were 22 (22%), 30 (30%), 19 (19%), and 39 (39%), respectively. All BrT colonies were identified as C neoformans. BeT were identified as 19 isolates of Cryptococcus laurentii, 10 isolates of Malassezia furfur, and 1 isolate of Cryptococcus uniguttulatus. PT was divided into two colony color types: light-PT (l-PT) and deep-PT (d-PT). Eighteen of l-PT and one of d-PT were identified as Rhodotorula glutinis and Rhodotorula mucilaginosa, respectively. WT were identified as 34 isolates of Cryptococcus guilliermondii, 3 isolates of Cryptococcus zeylanoides, 1 isolate of Cryptococcus sake, and 1 isolate of Stephanoascus ciferrii. Most strains were classified identically with the use of either phenotype or genotyping techniques, but C uniguttulatus and C sake classified by phenotyping were Pseudozyma aphidis and Cryptococcus famata by genotyping. This rapid screening technique of pathogenic yeast-like fungi by only colony characteristics is also expected to be very useful for primary yeast screening. Additionally, we investigated the seasonal variations of C neoformans and other yeast-like fungi from 379 pigeon-dropping samples that were collected from February 2011 to March 2011. We isolated 685 yeast-like fungi from the samples. Almost all C neoformans and yeast-like fungi were isolated in the fall (298 strains, 43.5%) and spring (244 strains, 35.6%). A few yeast-like fungi were isolated in winter (98 strains, 14.3%) and summer (45 strains, 6%). These results would be used as an important indicator related to epidemiology and prevention of pathogenic yeast-like fungi infections transmitted through pigeon droppings.

Comparison of dual-energy x-ray absorptiometry and measurement of total body water content by deuterium oxide dilution for estimating body composition in dogs.

OBJECTIVE: To compare percentage of body fat (%BF) estimates from dual-energy x-ray absorptiometry (DEXA) with those derived from total body water (TBW) determination by deuterium oxide (D2O) dilution. ANIMALS: 31 healthy, adult, purebred dogs of various ages and breeds (body weight, 15 to 39 kg). PROCEDURE: The TBW was measured by D2O dilution and subsequent analysis via nuclear magnetic resonance (NMR). Blood was collected before and 2 hours after IV administration of 275 mg of D2O/kg of body weight. Plasma was separated and stored at -30 C until analysis by deuterium NMR. The DEXA scans were obtained immediately after blood collection from dogs under general anesthesia. RESULTS: Measurements of %BF by DEXA averaged 15.8% higher than calculated estimates of TBW content by D2O dilution. The linear regression of %BF by TBW content on %BF by DEXA had a slope of 1.04 and a correlation coefficient of 0.84, indicating excellent relative agreement between methods despite the significant difference in absolute agreement between the 2 methods. The average difference between methods did not differ by breed, sex, body condition score, body weight, or %BF, as measured by DEXA. CONCLUSION: Comparability of our data with those of previous studies suggest that DEXA is useful for in vivo estimation of body composition in healthy dogs. Body fat estimated by D2O dilution will be less than that determined by DEXA, despite excellent relative agreement between methods.