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1.
J Mol Cell Biol ; 14(6)2022 11 17.
Article in English | MEDLINE | ID: mdl-35704671

ABSTRACT

Fas-associated factor 1 (FAF1) is a scaffolding protein that plays multiple functions, and dysregulation of FAF1 is associated with many types of diseases such as cancers. FAF1 contains multiple ubiquitin-related domains (UBA, UBL1, UBL2, UAS, and UBX), each domain interacting with a specific partner. In particular, the interaction of UBL1 with heat shock protein 70 (Hsp70) is associated with tumor formation, although the molecular understanding remains unknown. In this study, the structural analysis revealed that His160 of FAF1 is important for its interaction with Hsp70. The association of Hsp70 with FAF1 is required for the interaction with IQGAP1. FAF1 negatively regulates RhoA activation by FAF1-Hsp70 complex formation, which then interacts with IQGAP1. These steps play a key role in maintaining the stability of cell-to-cell junction. We conclude that FAF1 plays a critical role in the structure and function of adherens junction during tissue homeostasis and morphogenesis by suppressing RhoA activation, which induces the activation of Rho-associated protein kinase, phosphorylation of myosin light chain, formation of actin stress fiber, and disruption of adherens junction. In addition, depletion of FAF1 increased collective invasion in a 3D spheroid cell culture. These results provide insight into how the FAF1-Hsp70 complex acts as a novel regulator of the adherens junction integrity. The complex can be a potential therapeutic target to inhibit tumorigenesis and metastasis.


Subject(s)
HSP70 Heat-Shock Proteins , Neoplasms , Humans , HSP70 Heat-Shock Proteins/metabolism , Apoptosis Regulatory Proteins/metabolism , Adaptor Proteins, Signal Transducing/metabolism , Adherens Junctions/metabolism , Ubiquitin/metabolism , Neoplasms/metabolism , rhoA GTP-Binding Protein/metabolism
2.
Biochem J ; 478(19): 3505-3525, 2021 10 15.
Article in English | MEDLINE | ID: mdl-34515295

ABSTRACT

DJ-1 is known to play neuroprotective roles by eliminating reactive oxygen species (ROS) as an antioxidant protein. However, the molecular mechanism of DJ-1 function has not been well elucidated. This study explored the structural and functional changes of DJ-1 in response to oxidative stress. Human DJ-1 has three cysteine residues (Cys46, Cys53 and Cys106). We found that, in addition to Cys106, Cys46 is the most reactive cysteine residue in DJ-1, which was identified employing an NPSB-B chemical probe (Ctag) that selectively reacts with redox-sensitive cysteine sulfhydryl. Peroxidatic Cys46 readily formed an intra-disulfide bond with adjacent resolving Cys53, which was identified with nanoUPLC-ESI-q-TOF tandem mass spectrometry (MS/MS) employing DBond algorithm under the non-reducing condition. Mutants (C46A and C53A), not forming Cys46-Cys53 disulfide cross-linking, increased oxidation of Cys106 to sulfinic and sulfonic acids. Furthermore, we found that DJ-1 C46A mutant has distorted unstable structure identified by biochemical assay and employing hydrogen/deuterium exchange-mass spectrometry (HDX-MS) analysis. All three Cys mutants lost antioxidant activities in SN4741 cell, a dopaminergic neuronal cell, unlike WT DJ-1. These findings suggest that all three Cys residues including Cys46-Cys53 disulfide cross-linking are required for maintaining the structural integrity, the regulation process and cellular function as an antioxidant protein. These studies broaden the understanding of regulatory mechanisms of DJ-1 that operate under oxidative conditions.


Subject(s)
Antioxidants/chemistry , Antioxidants/metabolism , Cysteine/metabolism , Oxidative Stress/genetics , Protein Deglycase DJ-1/chemistry , Protein Deglycase DJ-1/metabolism , Cross-Linking Reagents/metabolism , Dopaminergic Neurons/metabolism , Gene Knockout Techniques , HeLa Cells , Humans , Hydrogen Deuterium Exchange-Mass Spectrometry , Oxidation-Reduction , Protein Deglycase DJ-1/genetics , Protein Domains , Reactive Oxygen Species/metabolism , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Sulfhydryl Compounds/metabolism , Tandem Mass Spectrometry , Transfection
3.
Int J Mol Sci ; 21(18)2020 Sep 05.
Article in English | MEDLINE | ID: mdl-32899552

ABSTRACT

ß/γ-Crystallins, the main structural protein in human lenses, have highly stable structure for keeping the lens transparent. Their mutations have been linked to cataracts. In this study, we identified 10 new mutations of ß/γ-crystallins in lens proteomic dataset of cataract patients using bioinformatics tools. Of these, two double mutants, S175G/H181Q of ßΒ2-crystallin and P24S/S31G of γD-crystallin, were found mutations occurred in the largest loop linking the distant ß-sheets in the Greek key motif. We selected these double mutants for identifying the properties of these mutations, employing biochemical assay, the identification of protein modifications with nanoUPLC-ESI-TOF tandem MS and examining their structural dynamics with hydrogen/deuterium exchange-mass spectrometry (HDX-MS). We found that both double mutations decrease protein stability and induce the aggregation of ß/γ-crystallin, possibly causing cataracts. This finding suggests that both the double mutants can serve as biomarkers of cataracts.


Subject(s)
Cataract/genetics , beta-Crystallin B Chain/genetics , gamma-Crystallins/genetics , Adolescent , Adult , Aged , Child, Preschool , Humans , Infant, Newborn , Lens, Crystalline/metabolism , Mutation/genetics , Protein Aggregates/genetics , Protein Stability , Proteomics/methods , beta-Crystallin B Chain/metabolism , gamma-Crystallins/metabolism
4.
Sci Rep ; 9(1): 2592, 2019 02 22.
Article in English | MEDLINE | ID: mdl-30796345

ABSTRACT

Heat shock proteins are induced by activation of heat shock factor 1 (HSF1) in response to heat shock and protect against heat stress. However, the molecular mechanisms underlying the downstream signal of heat shock have not been fully elucidated. We found that similarly to canonical Hsps, Arc/Arg3.1 is also markedly induced by heat shock and by other cellular stress inducers, including diamide, sodium arsenite and H2O2 in various cells. We noted that heat stress-induced Arc/Arg3.1 protein is short lived, with a half-life of <30 min, and is readily degraded by the ubiquitin-proteasome system. Arc/Arg3.1 overexpression inhibited the up-regulation of heat shock-induced Hsp70 and Hsp27, suggesting that Arc/Arg3.1 is a negative regulator of heat shock response (HSR). Studying the effect of Arc/Arg3.1 on HSF1, a major transcription factor in HSR, we found that Arc/Arg3.1 binds to HSF1 and inhibits its binding to the heat shock element in gene promoters, resulting in reduced induction of Hsp27 and Hsp70 mRNAs, without affecting HSF1's phosphorylation-dependent activation, or nuclear localization. Arc/Arg3.1 overexpression decreased cell survival in response to heat shock. We conclude that Arc/Arg3.1 is transiently expressed after heat shock and negatively regulates HSF1 in the feedback loop of HSR.


Subject(s)
Cytoskeletal Proteins/metabolism , Heat Shock Transcription Factors/metabolism , Heat-Shock Response , Nerve Tissue Proteins/metabolism , Animals , Cytoskeletal Proteins/genetics , Gene Expression Regulation , HSP70 Heat-Shock Proteins/metabolism , HeLa Cells , Heat Shock Transcription Factors/genetics , Heat-Shock Proteins/metabolism , Humans , Mice , Molecular Chaperones/metabolism , Nerve Tissue Proteins/genetics , Phosphorylation , Promoter Regions, Genetic , Protein Binding , RNA, Messenger/metabolism , Ubiquitination
5.
Biochem Biophys Res Commun ; 495(1): 1567-1572, 2018 01 01.
Article in English | MEDLINE | ID: mdl-29128359

ABSTRACT

Ubiquitin C-terminal hydrolase-L1 (UCH-L1), which catalyzes the hydrolysis of ubiquitin esters and amides, is highly expressed in brain. Recently, UCH-L1 has been found to increase cancer cell migration and invasion by modulating hydrogen peroxide generated by NADPH oxidase 4 (NOX4). Because angiogenesis is also mediated by hydrogen peroxide, we explored the role of UCH-L1 in angiogenesis in human umbilical vein endothelial cells (HUVECs). Silencing UCH-L1 suppressed tubule formation in HUVECs, indicating that UCH-L1 promotes angiogenesis in vitro. This was confirmed using in vivo Matrigel plug studies of HUVECs, after overexpressing or silencing UCH-L1. Silencing UCH-L1 significantly suppressed VEGF-induced ROS levels as well as activation of VEGFR, both of which are required for angiogenesis. This study also showed that UCH-L1 promotes angiogenesis of HUVECs, as well as invasion in cancer cells, by up-regulating ROS by deubiquitination of NOX4, suggesting that UCH-L1 plays a key role in angiogenesis of HUVECS by regulating ROS levels by deubiquitination of NOX4.


Subject(s)
Endothelial Cells/physiology , Hydrogen Peroxide/metabolism , NADPH Oxidase 4/metabolism , Neovascularization, Physiologic/physiology , Ubiquitin Thiolesterase/metabolism , Vascular Endothelial Growth Factor A/metabolism , Cells, Cultured , Endothelial Cells/cytology , Gene Expression Regulation, Enzymologic/physiology , Humans , Reactive Oxygen Species/metabolism , Receptors, Vascular Endothelial Growth Factor/metabolism , Ubiquitination/physiology
6.
Sci Rep ; 6: 34432, 2016 10 05.
Article in English | MEDLINE | ID: mdl-27703196

ABSTRACT

Reactive oxygen species (ROS) are key molecules regulating various cellular processes. However, what the cellular targets of ROS are and how their functions are regulated is unclear. This study explored the cellular proteomic changes in response to oxidative stress using H2O2 in dose- and recovery time-dependent ways. We found discernible changes in 76 proteins appearing as 103 spots on 2D-PAGE. Of these, Prxs, DJ-1, UCH-L3 and Rla0 are readily oxidized in response to mild H2O2 stress, and then degraded and active proteins are newly synthesized during recovery. In studies designed to understand the degradation process, multiple cellular modifications of redox-sensitive proteins were identified by peptide sequencing with nanoUPLC-ESI-q-TOF tandem mass spectrometry and the oxidative structural changes of Prx2 explored employing hydrogen/deuterium exchange-mass spectrometry (HDX-MS). We found that hydrogen/deuterium exchange rate increased in C-terminal region of oxidized Prx2, suggesting the exposure of this region to solvent under oxidation. We also found that Lys191 residue in this exposed C-terminal region of oxidized Prx2 is polyubiquitinated and the ubiquitinated Prx2 is readily degraded in proteasome and autophagy. These findings suggest that oxidation-induced ubiquitination and degradation can be a quality control mechanism of oxidized redox-sensitive proteins including Prxs and DJ-1.


Subject(s)
Homeodomain Proteins/metabolism , Hydrogen Peroxide/pharmacology , Oxidative Stress/drug effects , Protein Deglycase DJ-1/metabolism , Proteolysis/drug effects , Ubiquitination/drug effects , HeLa Cells , Humans , Oxidation-Reduction/drug effects , Proteasome Endopeptidase Complex/metabolism , Protein Domains
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