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1.
Neuro Oncol ; 26(5): 858-871, 2024 May 03.
Article in English | MEDLINE | ID: mdl-38153426

ABSTRACT

BACKGROUND: Intrinsic or environmental stresses trigger the accumulation of improperly folded proteins in the endoplasmic reticulum (ER), leading to ER stress. To cope with this, cells have evolved an adaptive mechanism named the unfolded protein response (UPR) which is hijacked by tumor cells to develop malignant features. Glioblastoma (GB), the most aggressive and lethal primary brain tumor, relies on UPR to sustain growth. We recently showed that IRE1 alpha (referred to IRE1 hereafter), 1 of the UPR transducers, promotes GB invasion, angiogenesis, and infiltration by macrophage. Hence, high tumor IRE1 activity in tumor cells predicts a worse outcome. Herein, we characterized the IRE1-dependent signaling that shapes the immune microenvironment toward monocytes/macrophages and neutrophils. METHODS: We used human and mouse cellular models in which IRE1 was genetically or pharmacologically invalidated and which were tested in vivo. Publicly available datasets from GB patients were also analyzed to confirm our findings. RESULTS: We showed that IRE1 signaling, through both the transcription factor XBP1s and the regulated IRE1-dependent decay controls the expression of the ubiquitin-conjugating E2 enzyme UBE2D3. In turn, UBE2D3 activates the NFκB pathway, resulting in chemokine production and myeloid infiltration in tumors. CONCLUSIONS: Our work identifies a novel IRE1/UBE2D3 proinflammatory axis that plays an instrumental role in GB immune regulation.


Subject(s)
Brain Neoplasms , Endoribonucleases , Glioblastoma , Myeloid Cells , Protein Serine-Threonine Kinases , Signal Transduction , Glioblastoma/pathology , Glioblastoma/metabolism , Humans , Mice , Endoribonucleases/metabolism , Endoribonucleases/genetics , Animals , Protein Serine-Threonine Kinases/metabolism , Protein Serine-Threonine Kinases/genetics , Brain Neoplasms/pathology , Brain Neoplasms/metabolism , Myeloid Cells/metabolism , Myeloid Cells/pathology , Unfolded Protein Response , Tumor Microenvironment , Tumor Cells, Cultured , Endoplasmic Reticulum Stress
2.
Polymers (Basel) ; 15(11)2023 May 30.
Article in English | MEDLINE | ID: mdl-37299313

ABSTRACT

Bacterial immobilization is regarded as an enabling technology to improve the stability and reusability of biocatalysts. Natural polymers are often used as immobilization matrices but present certain drawbacks, such as biocatalyst leakage and loss of physical integrity upon utilization in bioprocesses. Herein, we prepared a hybrid polymeric matrix that included silica nanoparticles for the unprecedented immobilization of the industrially relevant Gluconobacter frateurii (Gfr). This biocatalyst can valorize glycerol, an abundant by-product of the biodiesel industry, into glyceric acid (GA) and dihydroxyacetone (DHA). Different concentrations of siliceous nanosized materials, such as biomimetic Si nanoparticles (SiNps) and montmorillonite (MT), were added to alginate. These hybrid materials were significantly more resistant by texture analysis and presented a more compact structure as seen by scanning electron microscopy. The preparation including 4% alginate with 4% SiNps proved to be the most resistant material, with a homogeneous distribution of the biocatalyst in the beads as seen by confocal microscopy using a fluorescent mutant of Gfr. It produced the highest amounts of GA and DHA and could be reused for up to eight consecutive 24 h reactions with no loss of physical integrity and negligible bacterial leakage. Overall, our results indicate a new approach to generating biocatalysts using hybrid biopolymer supports.

3.
Cancer Lett ; 494: 73-83, 2020 12 01.
Article in English | MEDLINE | ID: mdl-32882336

ABSTRACT

Glioblastoma multiforme (GBM) is the most severe primary brain cancer. Despite an aggressive treatment comprising surgical resection and radio/chemotherapy, patient's survival post diagnosis remains short. A limitation for success in finding novel improved therapeutic options for such dismal disease partly lies in the lack of a relevant animal model that accurately recapitulates patient disease and standard of care. In the present study, we have developed an immunocompetent GBM model that includes tumor surgery and a radio/chemotherapy regimen resembling the Stupp protocol and we have used this model to test the impact of the pharmacological inhibition of the endoplasmic reticulum (ER) stress sensor IRE1, on treatment efficacy.


Subject(s)
Benzopyrans/administration & dosage , Brain Neoplasms/therapy , Combined Modality Therapy/methods , Glioblastoma/therapy , Morpholines/administration & dosage , Animals , Benzopyrans/pharmacology , Brain Neoplasms/genetics , Brain Neoplasms/immunology , Cell Line, Tumor , Craniotomy , Drug Therapy , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Glioblastoma/genetics , Glioblastoma/immunology , Humans , Immunocompetence , Injections, Intralesional , Mice , Morpholines/pharmacology , Neoadjuvant Therapy , Radiotherapy , Treatment Outcome , Tumor Microenvironment/drug effects , Xenograft Model Antitumor Assays
4.
Genome Announc ; 3(4)2015 Jul 16.
Article in English | MEDLINE | ID: mdl-26184948

ABSTRACT

We report here the complete genome sequence of a noninvasive strain of Streptococcus pyogenes M/emm28, isolated from perianal dermatitis in a child. The genome is composed of 1,950,454 bp, with a G+C content of 38.2%, and it has 1,925 identified coding sequences and harbors two intact prophages and a new integrating conjugative element (ICE).

5.
Genome Announc ; 3(1)2015 Jan 22.
Article in English | MEDLINE | ID: mdl-25614568

ABSTRACT

Here, we announce the complete annotated genome sequence of a Streptococcus pyogenes M/emm83 strain, STAB1101, isolated from clustered cases in homeless persons in Brittany (France). The genome is composed of 1,709,790 bp, with a G+C content of 38.4% and 1,550 identified coding sequences (CDS), and it harbors a Tn916-like transposon.

6.
Genome Announc ; 2(6)2014 Nov 20.
Article in English | MEDLINE | ID: mdl-25414498

ABSTRACT

We report the complete genome sequence of an invasive isolate of Streptococcus pyogenes M/emm44, belonging to a clonal outbreak that occurred in French Brittany. The genome is composed of 1,795,608 bp, with a GC content of 38.5%, has 1,358 identified coding sequences (CDSs), and harbors a novel Tn916-like transposon (Tn6253).

7.
Genome Announc ; 2(4)2014 Aug 28.
Article in English | MEDLINE | ID: mdl-25169855

ABSTRACT

We report a closed genome sequence of group A Streptococcus genotype emm3 (GAS M/emm3) strain STAB902, isolated from a superficial pyodermatitis. The genome is composed of 1,892,124 bp, 6 integrated prophages, and has 1,858 identified coding sequences (CDSs). It has been fitted with the two available invasive GAS M/emm3 strains.

8.
Genomics ; 83(5): 772-89, 2004 May.
Article in English | MEDLINE | ID: mdl-15081108

ABSTRACT

Complete clinical expression of the HFE1 hemochromatosis is very likely modulated by genes linked to duodenal iron absorption, whose level is conditioned by unknown processes taking place during enterocyte differentiation. We carried out a transcriptomic study on CaCo-2 cells used as a model of enterocyte differentiation in vitro. Of the 720 genes on the microarrays, 80, 50, and 56 were significantly down-regulated up-regulated, and invariant during differentiation. With regard to iron metabolism, we showed that HEPH, SLC11A2, SLC11A3, and TF are significantly up-regulated, while ATP7B and SLC39A1 (and SFT) are down-regulated and ACO1, dCYTb, FECH, and FTH1 show constant expression. Ontological annotations highlight the decrease in the expression of cell cycle and DNA metabolism associated genes as well as transcription, protein metabolism, signal transduction, and nucleocytoplasmic transport associated genes, whereas there are increases in the expression of genes linked to cell adhesion, lipid and xenobiotic metabolism, iron transport and homeostasis, and immune response.


Subject(s)
Cell Differentiation , Enterocytes/cytology , Enterocytes/metabolism , Gene Expression Profiling , Genomics , Iron/metabolism , Transcription, Genetic/genetics , Caco-2 Cells , Humans , Oligonucleotide Array Sequence Analysis , RNA, Messenger/genetics , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction
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