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1.
J Appl Microbiol ; 124(2): 457-468, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29154479

ABSTRACT

AIMS: The aim of this study was to isolate a novel yeast strain, evaluate biosurfactant production by the strain and characterize the major product. METHODS AND RESULTS: The strain SAM20, isolated from grass, identified as Sporisorium sp. aff. sorghi based on phylogenetic analyses. The strain produced approximately 32 g l-1 glycolipid biosurfactants from 40 g l-1 soybean oil after 7 days at 28°C. The glycolipids showed a unique pattern of mannosylerythritol lipids (MELs) on thin layer chromatography plate compared to those hitherto reported. Structural characterization of the major product, called GL-A, revealed that it was mainly tri-acetylated mono-acylated MELs (MEL-A2) with C14:0, C16:0, C12:0 or C14:1 as the hydrophobic chain. The critical micelle concentration (CMC), the surface tension at CMC and hydrophilic-lipophilic balance value for GL-A were estimated to be 20 mg l-1 , 30·0 mN m-1 and 8·7, respectively. CONCLUSIONS: A MEL-A2 with novel composition and surface activities was efficiently produced from a novel MEL producer. This is the first report on production of MEL-A2 as the major product and from soybean oil. The biosurfactant has potential application as a wetting agent and oil-in-water emulsifier. SIGNIFICANCE AND IMPACT OF THE STUDY: Discovery of novel structures and novel strains is valuable for further commercial development and application of MELs. Sporisorium sp. aff. sorghi SAM20 can be considered as a potential candidate for commercial production of biosurfactants.


Subject(s)
Glycolipids/metabolism , Ustilaginales/metabolism , Chromatography, Thin Layer , Glycolipids/chemistry , Hydrophobic and Hydrophilic Interactions , Phylogeny , Surface Tension , Surface-Active Agents/chemistry , Surface-Active Agents/metabolism , Ustilaginales/classification , Ustilaginales/genetics , Ustilaginales/isolation & purification
2.
Pak J Biol Sci ; 12(12): 914-8, 2009 Jun 15.
Article in English | MEDLINE | ID: mdl-19777785

ABSTRACT

Among some Bacillus species, a protein highly homologous to HU, classified HB and coded by hbs gene. According to the recent studies, the sequence of hbs gene just in one strain of Bacillus subtilis exists in gene bank (ATCC 23857). In this study, DNA from Bacillus subtilis ATCC 6633 was extracted and investigated by PCR. The PCR product was sequenced and shown to differ in just one nucleotide from B. subtilis ATCC 23857. Hence, it was chosen as reference and for the first time, used for non-radioactive labeled probe preparation. The PCR product in Bacillus subtilis with ATCC 6633 was labeled using non-radioactive DIG-labeled nucleotides and conditions of probe preparation and hybridization were optimized and checked it by Southern blotting.


Subject(s)
Bacillus subtilis/genetics , Bacterial Proteins/genetics , DNA Probes/genetics , DNA-Binding Proteins/genetics , Genes, Bacterial , Bacillus subtilis/classification , Base Sequence , DNA Primers/genetics , DNA, Bacterial/genetics , Deoxyuracil Nucleotides , Dideoxynucleotides , Digoxigenin/analogs & derivatives , Molecular Sequence Data , Polymerase Chain Reaction , Sequence Homology, Nucleic Acid , Species Specificity
3.
Pak J Biol Sci ; 11(3): 438-42, 2008 Feb 01.
Article in English | MEDLINE | ID: mdl-18817169

ABSTRACT

This study was conducted to isolate novel lactose utilizing Xanthomonas campestris mutants. Such a mutant will assist the utilization of whey as the sole carbon source for xanthan gum production, lower costs of fermentation process and set a precise application for whey as a waste. In this study, a mutant strain (NA1) was isolated from Xanthomonas campestris cells exposed to nitrous acid mutagenesis Environmental conditions were optimized and maximum activity of the beta-galactosidase enzyme was obtained at pH 5.5 and 38 degrees C following which the beta-galactosidase activity in NA1 culture was increased 9.5 folds, compared to that of the wild type culture (336.1 U vs. 35.4 U). Xanthan gum production by NA1 using whey as carbon source was also studied. Using the experimental design of Plackett-Burman and statistical analysis, whey, as the main substrate and pH were the first factors affecting gum production among the seven parameters tested. Gum production using significant factors (such as substrate concentration and pH) was carried out in a lab-scale fermentor and 10 g L(-l) xanthan was obtained.


Subject(s)
Milk Proteins/metabolism , Mutation , Polysaccharides, Bacterial/biosynthesis , Xanthomonas campestris/metabolism , Fermentation , Whey Proteins , Xanthomonas campestris/genetics
4.
Pak J Biol Sci ; 11(2): 208-13, 2008 Jan 15.
Article in English | MEDLINE | ID: mdl-18817191

ABSTRACT

Purification and characterization of alcohol dehydrogenase (ADH) from Gluconobacter suboxydans was done in order to biotechnological and industrial application. Solubilization of enzyme from bacterial membrane fraction by Triton X-100 and subsequent fractionation on DEAE-Sephadex A-50 and Hydroxyapatite was successful in enzyme purification. Enzyme assay reaction mixture contained potassium ferricyanide 0.1 M, McIlvaine buffer 0.1 M (pH 5.5), Triton X-100 10%, ethanol 1 M and enzyme solution. The purified ADH Optimum pH activity was 5.5. The enzyme was in maximum stability in pH 5.8. The substrate specificity of the enzyme was determined using the same enzyme assay method as described above, except that various substrates (100 mM) were used instead of ethanol. The relative activity of the ADH for ethanol was higher than the others. The effects of metal ions and inhibitors on the activity of the enzyme were examined by measuring the activity using the same assay method as described above. Activity of purified enzyme was increased in the presence of Ca(+2) and was decreased in presence the of ethylenediamine tetra acetic acid (EDTA). Because the proper structure and function of the enzyme is related to structural Ca(+2) and EDTA can chelate Ca(+2). An apparent Michaelis constant for ethanol were examined to be 1.7 x 10(-3) M for ethanol as substrate.


Subject(s)
Alcohol Dehydrogenase/isolation & purification , Gluconobacter/enzymology , Alcohol Dehydrogenase/metabolism , Chromatography, Ion Exchange , Electrophoresis, Polyacrylamide Gel , Kinetics , Solubility , Substrate Specificity
5.
J Appl Microbiol ; 103(4): 1081-9, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17897213

ABSTRACT

AIMS: Isolation and characterization of chitinases from a halotolerant Bacillus pumilus. METHODS AND RESULTS: Bacillus pumilus strain SG2 was isolated from saline conditions. It is able to produce chitinase activity at high salt concentration. SDS-PAGE analysis of the B. pumilus SG2 culture supernatant showed two major bands that were induced by chitin. The amino acid sequence of the two proteins, designated ChiS and ChiL, showed a high homology with the chitinase of B. subtilis CHU26, and chitinase A of B. licheniformis, respectively. N-terminal signal peptide of both proteins was also determined. The molecular weight and isoelectric point of the chitinases were determined to be 63 and 74 kDa, and 4.5 and 5.1, for ChiS and ChiL respectively. The genes encoding for both chitinases were isolated and their sequence determined. The regulation of the chitinase genes is under the control of the catabolite repression system. CONCLUSIONS: Secreted chitinase genes and their flanking region on the genome of B. pumilus SG2 have been identified and sequenced. SIGNIFICANCE AND IMPACT OF THE STUDY: This is the first report of a multiple chitinases-producing B. pumilus halotolerant strain. We have identified two chitinases by using a reverse genetics approach. The chitinases show resistance to salt.


Subject(s)
Bacillus/metabolism , Chitinases/biosynthesis , Amino Acid Sequence , Bacillus/drug effects , Bacillus/genetics , Bacillus/isolation & purification , Chitin/pharmacology , Chitinases/genetics , Chitinases/isolation & purification , Culture Media , DNA, Bacterial/genetics , Electrophoresis, Polyacrylamide Gel/methods , Gene Expression Regulation, Bacterial , Gene Expression Regulation, Enzymologic , Isoelectric Focusing/methods , Molecular Sequence Data , Molecular Weight , Sodium Chloride/pharmacology
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