Evidence of recombination producing allelic diversity in MHC class I Mafa-B and -A alleles in cynomolgus macaques.

The MHC class I-A and -B genes of cynomolgus macaques are highly polymorphic. These genes encode proteins presenting peptides to CD8+ T cells to initiate adaptive immune response. Recombination events are one way the diversity of these alleles can be increased. Such events have been well characterized in humans, but have not been as well characterized in macaques. In order to identify and examine recombinations that create new alleles, it is important to analyze intron sequences. Intron sequences have been shown to be important to understand the evolutionary mechanisms involved in the generation of major histocompatibility complex (MHC) alleles and loci. Thus far, there have been relatively few intron sequences reported for MHC class I alleles in macaques, and this has hampered the understanding of MHC organization and evolution in macaques. In this study, we present evidence of a gene conversion event generating the Mafa-B*099 allele lineage by the combination of Mafa-B*054 and Mafa-B*095 allele lineages. A potential recombination between the Mafa-A3*13 and Mafa-A4:14 lineages was also observed, but it is less clear due to lack of intron 2 sequence. This report stresses the role that recombination can play in MHC class I diversity in cynomologus macaques, and the importance of introns in identifying and analyzing such events.

Components of genetic variance for plant survival and vigor of apple trees.

The additive and non-additive variance components were estimated from progenies derived from two samples of parents (representing a northern continental type climate) for five factors relating to plant survival and two composites of the factors. It was found that additive variance made up 90 and 100%, 91 and 100%, 91 and 100%, 100 and 100%, 82 and 59%, 91 and 100%, and 90 and 100% of the total genetic variance for leafing-out date, leafingout percent, tip injury, stem damage, root damage, a shoot composite, and a shoot-root composite for the two samples respectively. A third sample had 100% additive variance for plant height while, in contrast, a sample of rootstocks, differing from each other in their ability to dwarf grafted scions, had approximately 50-70% additive variance for plant height. It was shown that breeding progress for both winter survival and plant height could be achieved by exploiting the additive variance, the total genetic variance, or (where progenies were the selection unit rather than individuals) by progeny selection. By exploiting the additive variance, it should be possible to improve plant survival and change plant height in each of several successive generations. It is predicted that (with the exception of selection for vigor in a population having a range of dwarfing abilities) potential parents could be efficiently screened phenotypically and so obviate the need for genotypic evaluation. A total of 9180 progeny trees were involved in the analyses considered in this paper.