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1.
Evol Comput ; : 1-32, 2024 Jan 26.
Article in English | MEDLINE | ID: mdl-38271633

ABSTRACT

Genetic Programming (GP) often uses large training sets and requires all individuals to be evaluated on all training cases during selection. Random down-sampled lexicase selection evaluates individuals on only a random subset of the training cases allowing for more individuals to be explored with the same amount of program executions. However, sampling randomly can exclude important cases from the down-sample for a number of generations, while cases that measure the same behavior (synonymous cases) may be overused. In this work, we introduce Informed Down-Sampled Lexicase Selection. This method leverages population statistics to build down-samples that contain more distinct and therefore informative training cases. Through an empirical investigation across two different GP systems (PushGP and Grammar-Guided GP), we find that informed down-sampling significantly outperforms random down-sampling on a set of contemporary program synthesis benchmark problems. Through an analysis of the created down-samples, we find that important training cases are included in the down-sample consistently across independent evolutionary runs and systems. We hypothesize that this improvement can be attributed to the ability of Informed Down-Sampled Lexicase Selection to maintain more specialist individuals over the course of evolution, while still benefiting from reduced per-evaluation costs.

2.
Entropy (Basel) ; 25(1)2023 Jan 03.
Article in English | MEDLINE | ID: mdl-36673234

ABSTRACT

Recent work on hybrid quantum-classical machine learning systems has demonstrated success in utilizing parameterized quantum circuits (PQCs) to solve the challenging reinforcement learning (RL) tasks, with provable learning advantages over classical systems, e.g., deep neural networks. While existing work demonstrates and exploits the strength of PQC-based models, the design choices of PQC architectures and the interactions between different quantum circuits on learning tasks are generally underexplored. In this work, we introduce a Multi-objective Evolutionary Architecture Search framework for parameterized quantum circuits (MEAS-PQC), which uses a multi-objective genetic algorithm with quantum-specific configurations to perform efficient searching of optimal PQC architectures. Experimental results show that our method can find architectures that have superior learning performance on three benchmark RL tasks, and are also optimized for additional objectives including reductions in quantum noise and model size. Further analysis of patterns and probability distributions of quantum operations helps identify performance-critical design choices of hybrid quantum-classical learning systems.

3.
Genet Program Evolvable Mach ; 23(1): 1-2, 2022.
Article in English | MEDLINE | ID: mdl-35250372
4.
Artif Life ; : 1-21, 2021 Sep 01.
Article in English | MEDLINE | ID: mdl-34473827

ABSTRACT

In genetic programming, an evolutionary method for producing computer programs that solve specified computational problems, parent selection is ordinarily based on aggregate measures of performance across an entire training set. Lexicase selection, by contrast, selects on the basis of performance on random sequences of training cases; this has been shown to enhance problem-solving power in many circumstances. Lexicase selection can also be seen as better reflecting biological evolution, by modeling sequences of challenges that organisms face over their lifetimes. Recent work has demonstrated that the advantages of lexicase selection can be amplified by down-sampling, meaning that only a random subsample of the training cases is used each generation. This can be seen as modeling the fact that individual organisms encounter only subsets of the possible environments and that environments change over time. Here we provide the most extensive benchmarking of down-sampled lexicase selection to date, showing that its benefits hold up to increased scrutiny. The reasons that down-sampling helps, however, are not yet fully understood. Hypotheses include that down-sampling allows for more generations to be processed with the same budget of program evaluations; that the variation of training data across generations acts as a changing environment, encouraging adaptation; or that it reduces overfitting, leading to more general solutions. We systematically evaluate these hypotheses, finding evidence against all three, and instead draw the conclusion that down-sampled lexicase selection's main benefit stems from the fact that it allows the evolutionary process to examine more individuals within the same computational budget, even though each individual is examined less completely.

5.
Genet Program Evolvable Mach ; 22(1): 1-2, 2021.
Article in English | MEDLINE | ID: mdl-33613091
6.
Health Econ ; 28(10): 1220-1225, 2019 10.
Article in English | MEDLINE | ID: mdl-31243861

ABSTRACT

This paper investigates the impact of legislative changes allowing nurse practitioners to prescribe schedule II controlled substances independently. We find that this legal environment is associated with an increase in treatment admissions for opioid misuse and a decrease in opioid related mortality only when Mandatory Prescription Drugs Monitoring Programs are in place.


Subject(s)
Analgesics, Opioid/administration & dosage , Nurse Practitioners/legislation & jurisprudence , Professional Autonomy , Scope of Practice/legislation & jurisprudence , Drug Overdose/mortality , Drug Overdose/prevention & control , Drug Prescriptions , Female , Humans , Male , Middle Aged
7.
Evol Comput ; 27(3): 377-402, 2019.
Article in English | MEDLINE | ID: mdl-29746157

ABSTRACT

Lexicase selection is a parent selection method that considers training cases individually, rather than in aggregate, when performing parent selection. Whereas previous work has demonstrated the ability of lexicase selection to solve difficult problems in program synthesis and symbolic regression, the central goal of this article is to develop the theoretical underpinnings that explain its performance. To this end, we derive an analytical formula that gives the expected probabilities of selection under lexicase selection, given a population and its behavior. In addition, we expand upon the relation of lexicase selection to many-objective optimization methods to describe the behavior of lexicase selection, which is to select individuals on the boundaries of Pareto fronts in high-dimensional space. We show analytically why lexicase selection performs more poorly for certain sizes of population and training cases, and show why it has been shown to perform more poorly in continuous error spaces. To address this last concern, we propose new variants of ε-lexicase selection, a method that modifies the pass condition in lexicase selection to allow near-elite individuals to pass cases, thereby improving selection performance with continuous errors. We show that ε-lexicase outperforms several diversity-maintenance strategies on a number of real-world and synthetic regression problems.


Subject(s)
Computational Biology/methods , Linguistics/statistics & numerical data , Models, Statistical , Algorithms , Humans , Regression Analysis , Search Engine/statistics & numerical data , Semantics
8.
Angew Chem Int Ed Engl ; 56(16): 4443-4446, 2017 04 10.
Article in English | MEDLINE | ID: mdl-28322486

ABSTRACT

The predictable chemistry of Watson-Crick base-pairing imparts a unique structural programmability to DNA, enabling the facile design of molecular reactions that perform computations. However, many of the current architectures limit devices to a single operational cycle. Herein, we introduce the design of the "regenerator", a device based on coupled enthalpic and entropic reactions that permits the regeneration of molecular circuit components.

9.
Artif Life ; 22(3): 408-23, 2016.
Article in English | MEDLINE | ID: mdl-27472417

ABSTRACT

We describe the content and outcomes of the First Workshop on Open-Ended Evolution: Recent Progress and Future Milestones (OEE1), held during the ECAL 2015 conference at the University of York, UK, in July 2015. We briefly summarize the content of the workshop's talks, and identify the main themes that emerged from the open discussions. Two important conclusions from the discussions are: (1) the idea of pluralism about OEE-it seems clear that there is more than one interesting and important kind of OEE; and (2) the importance of distinguishing observable behavioral hallmarks of systems undergoing OEE from hypothesized underlying mechanisms that explain why a system exhibits those hallmarks. We summarize the different hallmarks and mechanisms discussed during the workshop, and list the specific systems that were highlighted with respect to particular hallmarks and mechanisms. We conclude by identifying some of the most important open research questions about OEE that are apparent in light of the discussions. The York workshop provides a foundation for a follow-up OEE2 workshop taking place at the ALIFE XV conference in Cancún, Mexico, in July 2016. Additional materials from the York workshop, including talk abstracts, presentation slides, and videos of each talk, are available at http://alife.org/ws/oee1 .


Subject(s)
Biological Evolution , Synthetic Biology , Congresses as Topic , Mexico
10.
Theory Biosci ; 135(3): 131-61, 2016 Sep.
Article in English | MEDLINE | ID: mdl-27194550

ABSTRACT

The open-endedness of a system is often defined as a continual production of novelty. Here we pin down this concept more fully by defining several types of novelty that a system may exhibit, classified as variation, innovation, and emergence. We then provide a meta-model for including levels of structure in a system's model. From there, we define an architecture suitable for building simulations of open-ended novelty-generating systems and discuss how previously proposed systems fit into this framework. We discuss the design principles applicable to those systems and close with some challenges for the community.


Subject(s)
Algorithms , Biology/methods , Computer Simulation , Models, Biological , Artificial Intelligence , Biological Evolution , Humans , Models, Genetic , Systems Theory
11.
Artif Life ; 12(4): 553-60, 2006.
Article in English | MEDLINE | ID: mdl-16953785

ABSTRACT

Evolutionary theorists have long been interested in the conditions that permit the evolution of altruistic cooperation. Recent work has demonstrated that altruistic donation can evolve in surprisingly simple models, in which agents base their decisions to donate solely on the similarity of evolved "tags" relative to evolved tag-difference tolerances. There is disagreement, however, about the conditions under which tag-mediated altruism will in fact evolve. Here we vary two critical parameters in a standard model of tag-mediated altruism-genetic stability and territorial structure-and show that altruism evolves in a wide range of conditions. We demonstrate the evolution of significant levels of altruism even when the immediate costs to donors equal the benefits to recipients. We describe the mechanism that permits the emergence of altruism in the model as a form of kin selection that is facilitated by interactions between altruism, genetic drift, and fecundity.


Subject(s)
Altruism , Biological Evolution , Animals , Artificial Intelligence , Computer Simulation , Genomic Instability , Humans , Models, Genetic , Models, Psychological
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