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1.
Oncogene ; 26(53): 7480-9, 2007 Nov 22.
Article in English | MEDLINE | ID: mdl-17563748

ABSTRACT

The mechanisms that are responsible for the restricted pattern of expression of the VE-cadherin gene in endothelial cells are not clearly understood. Regulation of expression is under the control of an approximately 140 bp proximal promoter that provides basal, non-endothelial specific expression. A larger region contained within the 2.5 kb genomic DNA sequence located ahead of the transcription start is involved in the specific expression of the gene in endothelial cells. We show here that the VE-cadherin promoter contains several putative hypoxia response elements (HRE) which are able to bind endothelial nuclear factors under normoxia. The VE-cadherin gene is not responsive to hypoxia but hypoxia-inducible factor (HIF)-2alpha specifically activates the promoter while HIF-1alpha does not. The HRE, that are involved in this activity have been identified. Further, we show that HIF-2alpha cooperates with the Ets-1 transcription factor for activation of the VE-cadherin promoter and that this synergy is dependent on the binding of Ets-1 to DNA. This cooperative action of HIF-2alpha with Ets-1 most probably participates to the transcriptional regulation of expression of the gene in endothelial cells. This mechanism may also be involved in the expression of the VE-cadherin gene by tumor cells in the process of vascular mimicry.


Subject(s)
Antigens, CD/genetics , Basic Helix-Loop-Helix Transcription Factors/genetics , Cadherins/genetics , Gene Expression Regulation/physiology , Proto-Oncogene Protein c-ets-1/physiology , 3T3 Cells , Animals , Antigens, CD/biosynthesis , Cadherins/biosynthesis , Cell Hypoxia/genetics , Endothelial Cells/physiology , Hypoxia-Inducible Factor 1, alpha Subunit/genetics , Mice , Myocardium/cytology , Promoter Regions, Genetic , Proto-Oncogene Protein c-ets-1/genetics , Response Elements , Transcriptional Activation , Transfection
2.
Genetics ; 150(1): 331-44, 1998 Sep.
Article in English | MEDLINE | ID: mdl-9725850

ABSTRACT

We have determined the complete nucleotide sequence of the mitochondrial DNA (mtDNA) of the dogfish, Scyliorhinus canicula. The 16,697-bp-long mtDNA possesses a gene organization identical to that of the Osteichthyes, but different from that of the sea lamprey Petromyzon marinus. The main features of the mtDNA of osteichthyans were thus established in the common ancestor to chondrichthyans and osteichthyans. The phylogenetic analysis confirms that the Chondrichthyes are the sister group of the Osteichthyes.


Subject(s)
DNA, Mitochondrial/genetics , Dogfish/genetics , Amino Acid Sequence , Animals , Base Sequence , Cytochrome b Group/genetics , Locus Control Region , Molecular Sequence Data , Phylogeny , RNA, Transfer/genetics
3.
Nucleic Acids Res ; 26(13): 3279-85, 1998 Jul 01.
Article in English | MEDLINE | ID: mdl-9628930

ABSTRACT

The complete nucleotide sequence of the mitochondrial DNA of the amphioxus Branchiostoma lanceolatum has been determined. This mitochondrial genome is small (15 076 bp) because of the short size of the two rRNA genes and the tRNA genes. In addition, this genome contains a very short non-coding region (57 bp) with no sequence reminiscent of a control region. The organisation of the coding genes, as well as of the two rRNA genes, is identical to that of the sea lamprey. Some differences in the repartition of the tRNA genes occur when compared to the lamprey. The mitochondrial codon usage of the amphioxus is reminiscent of that of urochordates since the AGA codon is read as a glycine and not as a stop codon as in vertebrates. Moreover, the base composition at the wobble positions of the codon is strongly biased toward guanine. Altogether, these data clearly emphasise the close relationships between amphioxus and vertebrates, and reinforce the notion that prochordates may be viewed as the brother group of vertebrates.


Subject(s)
Chordata, Nonvertebrate/genetics , DNA, Mitochondrial/genetics , Genome , Vertebrates/genetics , Animals , Base Sequence , Codon , Molecular Sequence Data , Nucleic Acid Conformation , Phylogeny , RNA, Transfer/chemistry , RNA, Transfer/genetics , Sequence Homology, Nucleic Acid
4.
Mech Dev ; 65(1-2): 71-85, 1997 Jul.
Article in English | MEDLINE | ID: mdl-9256346

ABSTRACT

We studied the expression of the estrogen-related receptor 1 (ERR-1) during mouse embryonic development. ERR-1 is expressed at very early stages in ES cells and at E8.5 in the mesodermal cells of the visceral yolk sac. ERR-1 continues to be expressed later in mesodermal tissues and particularly in heart and in skeletal muscles. This expression persists during all the embryonic development and in adult stage. ERR-1 transcripts level increases during muscle differentiation. Accordingly, we show that ERR-1 expression increases during the myoblast to myotube transition in differentiating C2 myoblastic cells. ERR-1 has also been detected in the nervous system during embryonic development. At E10.5, a high level of ERR-1 transcripts can be observed in differentiated cells of the intermediate zone of the spinal cord which also suggests a role of ERR-1 in the differentiation of the nervous system. The same is observed in the telencephalon vesicules at E13.5. Later, at E15.5 and E17.5, expression persists in the spinal cord but decreases dramatically in the central nervous system. Moreover, ERR-1 expression increases during skin formation and is detected in the stratum spinosum which contains differentiated Malpighian cells. Finally, we also observed ERR-1 in endodermal derivatives such as the epithelium of intestine and urogenital system. The DNA target of ERR-1 has been identified to be the SF-1/FTZ-F1 responsive element (SFRE) and we show in this paper that SF-1/FTZ-F1 and ERR-1 bind to and activate transcription independently through the SFRE element. Our study suggests that ERR-1 may be implicated in numerous physiological or developmental functions, particularly in the muscle, the central and peripheral nervous system and the epidermis. Interestingly, in these various systems ERR-1 expression is correlated with post-mitotic cells stage, suggesting that ERR-1 may play a role in the differentiation process.


Subject(s)
Embryonic and Fetal Development , Gene Expression Regulation, Developmental , Receptors, Cytoplasmic and Nuclear/biosynthesis , Receptors, Cytoplasmic and Nuclear/genetics , Receptors, Estrogen/biosynthesis , Receptors, Estrogen/genetics , Animals , Female , In Situ Hybridization , Mice , Pregnancy , RNA, Messenger/analysis , RNA, Messenger/biosynthesis , ERRalpha Estrogen-Related Receptor
5.
Gene Expr ; 6(6): 333-47, 1997.
Article in English | MEDLINE | ID: mdl-9495315

ABSTRACT

We localized and characterized a new regulatory element with promoter activity in the human c-ets-2 intron 1. This promoter governs the expression of 5' divergent c-ets-2 transcripts through multiple start sites dispersed within 300 bp. Among the multiple start sites detected, three are major transcriptional initiation points. We detected transcripts initiated from this new promoter in various cell lines such as COLO 320, NBE, or HepG2 cells. This promoter exhibits transcriptional activity when linked to the CAT gene, and deletion constructs reveal that it contains activating and repressing elements. The sequence of the promoter reveals putative binding sites for ETS, MYB, GATA, and Oct factors. In addition, we show that this promoter is functionally conserved in the chicken.


Subject(s)
DNA-Binding Proteins , Promoter Regions, Genetic/genetics , Proto-Oncogene Proteins/genetics , Proto-Oncogenes/genetics , Repressor Proteins , Trans-Activators/genetics , Transcription Factors , Animals , Base Sequence , Chickens , Cloning, Molecular , Conserved Sequence/genetics , DNA, Complementary/genetics , DNA, Recombinant , Gene Expression Regulation/genetics , Humans , Introns/genetics , Molecular Sequence Data , Proto-Oncogene Mas , Proto-Oncogene Protein c-ets-2 , RNA, Messenger/biosynthesis , RNA, Messenger/genetics , Restriction Mapping , Sequence Deletion , Transcription, Genetic/genetics , Transfection
6.
J Virol ; 69(9): 5506-15, 1995 Sep.
Article in English | MEDLINE | ID: mdl-7636996

ABSTRACT

The activity of the P4 promoter of the parvovirus minute virus of mice (prototype strain MVMp) is stimulated in ras-transformed FREJ4 cells compared with the parental FR3T3 line. This activation may participate in the oncolytic effect of parvoviruses, given that P4 drives a transcriptional unit encoding cytotoxic nonstructural proteins. Our results suggest that the higher transcriptional activity of promoter P4 in FREJ4 cells is mediated at least in part by upstream CRE elements. Accordingly, mutations in the CRE motifs impair P4 function more strongly in the FREJ4 derivative than in its FR3T3 parent. Further evidence that these elements contribute to hyperactivity of the P4 promoter in the ras transformant is the fact that they form distinct complexes with proteins from FREJ4 and FR3T3 cell extracts. This difference can be abolished by treating the FREJ4 cell extracts with cyclic AMP-dependent protein kinase (PKA) or treating original cultures with a PKA activator. These findings can be linked with two previously reported features of ras-transformed cells: the activation of a PKA-inhibited protein kinase cascade and the reduction of PKA-induced protein phosphorylation. In keeping with these facts, P4-directed gene expression can be up- or downmodulated in vivo by exposing cells to known inhibitors or activators of PKA, respectively.


Subject(s)
Genes, ras , Minute Virus of Mice/genetics , Nucleic Acid Conformation , Promoter Regions, Genetic , Regulatory Sequences, Nucleic Acid , Sulfonamides , Alkaloids/pharmacology , Animals , Base Sequence , Bucladesine/pharmacology , Cell Line , Cell Line, Transformed , Cell Nucleus/enzymology , Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Cyclic AMP-Dependent Protein Kinases/metabolism , DNA, Viral/chemistry , Gene Expression Regulation, Viral , Isoquinolines/pharmacology , Kinetics , Molecular Sequence Data , Plasmids , Rats , Rats, Inbred F344 , Staurosporine , TATA Box , Tetradecanoylphorbol Acetate/pharmacology , Transcription Factors/metabolism , Transcription, Genetic , Viral Nonstructural Proteins/biosynthesis
7.
Virology ; 202(1): 466-70, 1994 Jul.
Article in English | MEDLINE | ID: mdl-8009857

ABSTRACT

The early promoter (P4) of the autonomous parvovirus minute virus of mice (prototype strain) directs the expression of the transcription unit coding for the nonstructural proteins NS1 and NS2. Although proximal promoter elements (GC and TATA boxes) are essential for P4 activity in vivo, additional upstream sequences appear to be required for optimal transcription. Therefore, associations of proteins with the upstream regulatory region of promoter P4 were studied in the rat fibroblast cell line FREJ4 by gel retardation and in vitro as well as in vivo footprinting assays. This led to the identification of at least four distinct upstream elements that interacted with cellular proteins. The functionality of these elements was supported by the reduced level of gene expression driven by corresponding linker-substitutive mutants of promoter P4.


Subject(s)
Minute Virus of Mice/genetics , Promoter Regions, Genetic , Regulatory Sequences, Nucleic Acid , Animals , Base Sequence , Cell Line , DNA, Viral , Deoxyribonuclease I/metabolism , Mice , Molecular Sequence Data , Rats
8.
J Virol ; 65(9): 4919-28, 1991 Sep.
Article in English | MEDLINE | ID: mdl-1651412

ABSTRACT

Transformation of FR3T3 rat fibroblasts by a c-Ha-ras oncogene but not by bovine papillomavirus type 1 is associated with an increase in the abundance of mRNAs from prototype strain MVMp of infecting minute virus of mice, an oncosuppressive parvovirus. This differential parvovirus gene expression correlates with the reported sensitization of ras- but not bovine papillomavirus type 1-transformed cells to the killing effect of MVMp (N. Salomé, B. van Hille, N. Duponchel, G. Meneguzzi, F. Cuzin, J. Rommelaere, and J. Cornelis, Oncogene 5:123-130, 1990). Experiments were performed to determine at which level parvovirus expression is up-regulated in ras transformants. An MVMp "attenuation" sequence responsible for the premature arrest of RNA elongation was either placed or not placed in front of the chloramphenicol acetyltransferase gene and brought under the control of MVMp early promoter P4. Although the MVMp attenuator reduced P4-driven chloramphenicol acetyltransferase expression, the extent of attenuation was similar in normal and ras-transformed cells. Moreover, the analysis of P4-directed viral RNAs in MVMp-infected cultures by RNase protection and nuclear run-on assays also revealed a transcription elongation block of a similar amplitude in both types of cells. In addition, the stabilities of the three major parvoviral mRNAs did not vary significantly between normal and ras-transformed cells. Hence, it is concluded that the ras-induced increase in the accumulation of parvoviral mRNAs is mainly controlled at the level of transcription. Consistently, the TATA motif of the P4 promoter proved to have a differential photoreactivity when tested by in vivo UV footprinting assays in ras-transformed versus normal cells.


Subject(s)
Gene Expression Regulation, Viral , Genes, ras , Minute Virus of Mice/genetics , Animals , Base Sequence , Bovine papillomavirus 1/genetics , Cell Line , Cell Transformation, Viral , Molecular Sequence Data , Promoter Regions, Genetic , RNA, Messenger/genetics , Rats , Transcription, Genetic
9.
J Virol ; 64(6): 2537-44, 1990 Jun.
Article in English | MEDLINE | ID: mdl-2139892

ABSTRACT

Human fibroblasts and epithelial cells differing in their susceptibility to killing by the autonomous parvoviruses H-1 and minute virus of mice were compared for their capacity to express viral mRNAs and proteins. The transition from a parvovirus-resistant to a parvovirus-sensitive phenotype correlated with a proportional increase in the production of the three major viral transcripts and of structural and nonstructural proteins. In contrast, cell sensitization to parvovirus could not be correlated with detectable changes in virus uptake, intracellular localization of gene products, stability of viral mRNAs, or phosphorylation of viral nonstructural polypeptides. Moreover, the H-1 virus-sensitive keratinocyte line studied did not sustain a greater level of viral DNA amplification than its resistant derivative. Therefore, the differential susceptibility of the human cells tested to parvovirus infection appears to be mainly controlled at the level of transcription of the viral genome. Parvoviral gene expression could not be elevated by increasing the input multiplicity of infection in either of the cell systems analyzed. Together, these data suggest that a cellular factor(s) regulating parvoviral transcription may be modulated by oncogenic transformation or by differentiation, as both features have been shown to affect cell susceptibility to parvoviruses.


Subject(s)
Minute Virus of Mice/genetics , Parvoviridae/genetics , Transcription, Genetic , Capsid/genetics , Cell Division , Cell Line , Cell Survival , DNA, Viral/genetics , Epithelial Cells , Fibroblasts/cytology , Gene Amplification , Gene Expression , Genes, Viral , Humans , Keratinocytes/cytology , Minute Virus of Mice/pathogenicity , Nucleic Acid Hybridization , Parvoviridae/pathogenicity , RNA, Viral/genetics , RNA, Viral/isolation & purification , Viral Core Proteins/genetics , Viral Nonstructural Proteins
10.
Virology ; 171(1): 89-97, 1989 Jul.
Article in English | MEDLINE | ID: mdl-2525841

ABSTRACT

The FR3T3 and NRK rat cell lines and their human EJ Ha-ras-1 oncogene-transformed derivatives, termed FREJ and NREJ, were compared for their susceptibility to the parvovirus MVMp. For a similar production of p21ras protein, FREJ clones are markedly sensitized to killing by MVMp, whereas the NREJ cells are not. Such a contrasting effect of ras transformation on the sensitivity of cells of different origins to MVMp can be traced back to their respective abilities to support the parvoviral life cycle. The FR3T3 line produces a substantial amount of viral DNA whose expression in the form of the nonstructural protein NS-1 is stimulated in its transformed derivatives. Conversely, NRK cells offer an early block to parvoviral DNA replication and expression that appears to persist in the ras-transformed clones. Thus, at least two intracellular restrictions can protect normal rat cells against MVMp infection, and transformation by ras relieves one of them at the level of parvoviral gene expression. A fair correlation was also found between the degree of sensitivity of the various lines to MVMp-induced killing and their capacity to synthesize the nonstructural viral proteins, suggesting a possible role of parvoviral nonstructural proteins in cytotoxicity.


Subject(s)
Capsid/physiology , Cell Transformation, Viral , Minute Virus of Mice/growth & development , Parvoviridae/growth & development , Viral Core Proteins/physiology , Animals , Cells, Cultured , Cytopathogenic Effect, Viral , Gene Expression Regulation , Genes, ras , Minute Virus of Mice/genetics , Rats , Viral Nonstructural Proteins , Virus Replication
11.
J Virol ; 62(9): 3438-44, 1988 Sep.
Article in English | MEDLINE | ID: mdl-3404581

ABSTRACT

Cultures of established rat fibroblasts transformed by the avian erythroblastosis virus were more susceptible to the cytopathic effect of the autonomous parvovirus minute virus of mice, prototype strain (MVMp), than were their untransformed homologs. This effect could be ascribed to the presence of a greater fraction of cells that were sensitive to the killing action of MVMp in transformed cultures than in their normal parents. Yet, transformed and normal lines were similarly efficient in virus uptake, DNA amplification, and capsid protein synthesis. In contrast, transformants accumulated 2.5- to 3-fold greater amounts of all three major MVM mRNA species and nonstructural protein than did their normal progenitors. Thus, in this system transformation-associated sensitization of cells to MVMp appears to correlate primarily with an increase in their capacity for the expression of the viral transcription unit which encodes nonstructural proteins and is controlled by the P4 promoter. Consistently, a reporter gene was expressed at a higher level by transformed versus normal cultures, when placed under the control of the MVM P4 promoter. As infectious MVMp was produced in larger amounts by transformed cultures, a late step of the parvoviral cycle, such as synthesis, encapsidation of progeny DNA, or both, was also stimulated in the transformed cells.


Subject(s)
Cell Transformation, Viral , Gene Expression Regulation , Minute Virus of Mice/physiology , Parvoviridae/physiology , Virus Replication , Alpharetrovirus/physiology , Animals , Cell Cycle , Cell Division , Cell Line, Transformed , Cell Survival , Cytopathogenic Effect, Viral , DNA Replication , DNA, Viral/biosynthesis , Fibroblasts/cytology , Fibroblasts/microbiology , Mice , Minute Virus of Mice/genetics , Nucleic Acid Hybridization , RNA, Viral/biosynthesis , Rats , Transfection , Viral Proteins/analysis
12.
Biochimie ; 68(7-8): 951-5, 1986.
Article in English | MEDLINE | ID: mdl-3017458

ABSTRACT

Transformation of permanent rodent fibroblast cells by the polyoma virus middle T gene or the activated human Harvey-ras oncogene results in increased cellular permissiveness to the autonomous parvovirus minute-virus-of-mice. Parvoviral DNA amplification is restricted in the untransformed parental cell lines. Analysis of various parameters of the parvoviral life cycle shows that this block is partially overcome in the transformed lines.


Subject(s)
Antigens, Viral, Tumor/genetics , Cell Transformation, Neoplastic , Genes, Viral , Genes , Minute Virus of Mice/genetics , Oncogene Proteins, Viral/genetics , Oncogenes , Parvoviridae/genetics , Animals , Antigens, Polyomavirus Transforming , Cell Line , Clone Cells , Fibroblasts/cytology , Mice , Minute Virus of Mice/physiology , Polyomavirus/genetics , Rats
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