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1.
J Pept Sci ; 29(12): e3525, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37230473

ABSTRACT

The synthesis of Gobichelin-A, a naturally occurring mixed-ligand siderophore isolated from Streptomyces sp. NRRL F-4415, is described. The target molecule was planned to be synthesized by a convergent process involving the combination of two halves, Gob-A 1st half and Gob-A 2nd half, at the prefinal stage of the synthetic route. By adopting this method, fully protected Gobichelin-A was synthesized in excellent yield.


Subject(s)
Siderophores , Streptomyces , Siderophores/chemistry , Ligands , Streptomyces/chemistry
2.
J Org Chem ; 87(14): 8939-8955, 2022 07 15.
Article in English | MEDLINE | ID: mdl-35772022

ABSTRACT

An expeditious method for the synthesis of monosaccharides and disaccharides possessing 3-oxo-glycal units is revealed. Several monosaccharides and disaccharide-derived glycals are converted to the corresponding hexenuloses in three steps involving halo-alkoxylation, dehydrohalogenation, and ketalyzation reactions. A number of 3-oxo-glycals are synthesized to show the methodology's importance and generality. Further, the protocol is successfully applied to synthesize a rare-sugar disaccharide donor unit present as part of the trisaccharide moiety in the reported natural product, versipelostatin.


Subject(s)
Disaccharides , Monosaccharides , Trisaccharides
3.
Org Biomol Chem ; 16(20): 3732-3740, 2018 05 23.
Article in English | MEDLINE | ID: mdl-29565443

ABSTRACT

The first total synthesis of a structurally diverse mixed ligand siderophore, gobichelin B produced by Streptomyces sp. NRRL F-4415, is reported. The systematic assembly of the building blocks to synthesize Gob-B 1st half and Gob-B 2nd half and subsequent coupling of these two fragments followed by global deprotection using Pearlman's catalyst led to the isolation of gobichelin B in excellent yield and purity.


Subject(s)
Benzamides/chemical synthesis , Siderophores/chemical synthesis , Streptomyces/metabolism , Benzamides/chemistry , Chemistry Techniques, Synthetic , Ligands , Siderophores/chemistry
4.
J Org Chem ; 81(7): 2782-93, 2016 Apr 01.
Article in English | MEDLINE | ID: mdl-26926318

ABSTRACT

A novel method for the highly stereoselective synthesis of ß-(1→2)-C-saccharides employing 3-deoxy- and 3-C-branched glycals as hermaphroditic substrates is revealed. The generality of the C-C bond formation reaction between the two sugar units is evaluated. The developed methodology is successfully applied to the synthesis of biologically significant subunits that are present in various natural products, which include mixed C-disaccharides with adjacent THP-THF rings, C-aryl glycosides, and highly functionalized ß-C-glycosides.

5.
Org Biomol Chem ; 12(42): 8408-14, 2014 Nov 14.
Article in English | MEDLINE | ID: mdl-25072802

ABSTRACT

The Claisen rearrangement of sugar derived allyl vinyl ether, Wittig olefination and intramolecular acetalization reactions were used as key steps in the first stereoselective total synthesis of neosemburin and isoneosemburin through the formation of a 3-C-branched sugar precursor as a key intermediate.


Subject(s)
Biological Products/chemical synthesis , Bridged Bicyclo Compounds, Heterocyclic/chemical synthesis , Gentianaceae/chemistry , Biological Products/chemistry , Bridged Bicyclo Compounds, Heterocyclic/chemistry , Stereoisomerism , Vinyl Compounds/chemistry
6.
Chem Commun (Camb) ; 50(17): 2218-21, 2014 Feb 28.
Article in English | MEDLINE | ID: mdl-24435224

ABSTRACT

Ring opening of 3-oxo-1,2-cyclopropanated sugars with thiols leads to the serendipitous discovery of the synthesis of sugar based homologated acyclic dithioacetals. These acyclic dithioacetals were found to undergo one-pot septanoside formation followed by stereoselective glycosylation in the presence of glycosyl acceptors under glycosylation reaction conditions.

7.
Org Lett ; 15(17): 4474-7, 2013 Sep 06.
Article in English | MEDLINE | ID: mdl-23964753

ABSTRACT

Electrophilic ring opening of spiro-cyclopropanecarboxylated sugars followed by reaction with DBU revealed interesting ring-contraction and ring-expansion reactions depending on the substrate and the kind of hydroxyl protective group present adjacent to the spiro center. A stereoselective method for accessing a new class of carbon chain extended keto-furanoses and C-glycosylated bicyclic compounds is reported.


Subject(s)
Bridged Bicyclo Compounds/chemistry , Carbohydrates/chemistry , Spiro Compounds/chemistry , Bridged Bicyclo Compounds, Heterocyclic/chemistry , Combinatorial Chemistry Techniques , Glycosylation , Models, Molecular , Molecular Structure , Stereoisomerism
8.
Org Lett ; 14(21): 5558-61, 2012 Nov 02.
Article in English | MEDLINE | ID: mdl-23072521

ABSTRACT

A one-pot ring-expansion-glycosylation reaction was performed using 1,2-cyclopropanated sugars as glycosyl donors and carbohydrate O-nucleophiles as acceptors to provide septanohexose mimics of pyranose and furanose derivatives. The methodology was successfully extended to the synthesis of septano-oligosaccharides by adopting a divergent strategy as well as an iterative protocol.


Subject(s)
Carbohydrates/chemistry , Cyclopropanes/chemistry , Oligosaccharides/chemical synthesis , Glycosylation , Molecular Structure , Oligosaccharides/chemistry
9.
Chem Commun (Camb) ; 48(5): 756-8, 2012 Jan 18.
Article in English | MEDLINE | ID: mdl-22134500

ABSTRACT

A stereoselective methodology was developed for the construction of C-spiro-glycosides in two steps involving bromonium ion activated solvolytic ring opening of sugar derived 1,2-cyclopropanecarboxylates followed by a one-pot dehydrohalogenation, intramolecular hetero-Michael addition (IHMA) and ester hydrolysis. The obtained spirocyclic lactols were further converted to enantiomerically pure spirolactones.


Subject(s)
4-Butyrolactone/chemical synthesis , Chemistry, Pharmaceutical/methods , Cyclopropanes/chemistry , Monosaccharides/chemistry , Spiro Compounds/chemical synthesis , Glycosides , Hydrolysis , Molecular Structure , Stereoisomerism
10.
Nat Chem Biol ; 6(6): 418-23, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20418877

ABSTRACT

Polysaccharides constitute a major component of bacterial cell surfaces and play critical roles in bacteria-host interactions. The biosynthesis of such molecules, however, has mainly been characterized through in vivo genetic studies, thus precluding discernment of the details of this pathway. Accordingly, we present a chemical approach that enabled reconstitution of the E. coli O-polysaccharide biosynthetic pathway in vitro. Starting with chemically prepared undecaprenyl-diphospho-N-acetyl-D-galactosamine, the E. coli O86 oligosaccharide repeating unit was assembled by means of sequential enzymatic glycosylation. Successful expression of the putative polymerase Wzy using a chaperone coexpression system then allowed demonstration of polymerization in vitro using this substrate. Analysis of more substrates revealed a defined mode of recognition for Wzy toward the lipid moiety. Specific polysaccharide chain length modality was furthermore demonstrated to result from the action of Wzz. Collectively, polysaccharide biosynthesis was chemically reconstituted in vitro, providing a well defined system for further underpinning molecular details of this biosynthetic pathway.


Subject(s)
Escherichia coli Proteins/metabolism , Escherichia coli/metabolism , Glycosyltransferases/metabolism , Polysaccharides, Bacterial/biosynthesis , Bacterial Vaccines/chemical synthesis , Cell Membrane/enzymology , Cell Membrane/metabolism , Escherichia coli/enzymology , Escherichia coli/genetics , Escherichia coli Proteins/biosynthesis , Escherichia coli Proteins/genetics , Glycosyltransferases/biosynthesis , Glycosyltransferases/genetics , Models, Molecular , Oligosaccharides/biosynthesis , Oligosaccharides/chemistry , Peptidoglycan/biosynthesis , Polysaccharides/biosynthesis , Substrate Specificity , Teichoic Acids/biosynthesis , Teichoic Acids/chemistry
12.
Carbohydr Res ; 342(9): 1151-8, 2007 Jul 02.
Article in English | MEDLINE | ID: mdl-17397814

ABSTRACT

A facile and efficient methodology has been developed for the synthesis of dithymidine and di-uridine derived disulfides using benzyltriethylammonium tetrathiomolybdate as a sulfur transfer reagent. However, a similar reaction of thymidine derivative with tetraethylammonium tetraselenotungstate as a selenium transfer reagent resulted in the formation of an unexpected cyclic diselenide. The disulfide derivatives of nucleosides have been used as precursors in a tandem disulfide cleavage-Michael addition/ring opening reactions to construct aminoacid and carbocyclic derivatives of nucleosides.


Subject(s)
Disulfides/chemistry , Thymidine/chemistry , Uridine/chemistry , Crystallography, X-Ray , Disulfides/chemical synthesis , Models, Molecular , Molecular Structure , Molybdenum/chemistry , Nucleosides/chemistry , Stereoisomerism
13.
Org Lett ; 9(7): 1331-4, 2007 Mar 29.
Article in English | MEDLINE | ID: mdl-17335228

ABSTRACT

[structure: see text]. An efficient method has been developed for the construction of fused perhydrofuro[2,3-b]pyrans by diastereoselective ring opening of 1,2-cyclopropanated sugar derivatives. The methodology has been successfully applied to the synthesis of fused perhydrofuro[2,3-b]pyrano-gamma-butyrolactone derivatives.


Subject(s)
Carbohydrates/chemistry , Cyclopropanes/chemistry , Furans/chemical synthesis , Pyrans/chemical synthesis , Cyclization , Furans/chemistry , Molecular Structure , Pyrans/chemistry
14.
J Med Chem ; 49(17): 5252-61, 2006 Aug 24.
Article in English | MEDLINE | ID: mdl-16913714

ABSTRACT

Structure-based design and synthesis of novel HIV protease inhibitors are described. The inhibitors are designed specifically to interact with the backbone of HIV protease active site to combat drug resistance. Inhibitor 3 has exhibited exceedingly potent enzyme inhibitory and antiviral potency. Furthermore, this inhibitor maintains impressive potency against a wide spectrum of HIV including a variety of multi-PI-resistant clinical strains. The inhibitors incorporated a stereochemically defined 5-hexahydrocyclopenta[b]furanyl urethane as the P2-ligand into the (R)-(hydroxyethylamino)sulfonamide isostere. Optically active (3aS,5R,6aR)-5-hydroxy-hexahydrocyclopenta[b]furan was prepared by an enzymatic asymmetrization of meso-diacetate with acetyl cholinesterase, radical cyclization, and Lewis acid-catalyzed anomeric reduction as the key steps. A protein-ligand X-ray crystal structure of inhibitor 3-bound HIV-1 protease (1.35 A resolution) revealed extensive interactions in the HIV protease active site including strong hydrogen bonding interactions with the backbone. This design strategy may lead to novel inhibitors that can combat drug resistance.


Subject(s)
Bridged Bicyclo Compounds, Heterocyclic/pharmacology , Drug Design , Drug Resistance, Viral/drug effects , HIV Protease Inhibitors/pharmacology , HIV Protease/drug effects , Sulfonamides/pharmacology , Bridged Bicyclo Compounds, Heterocyclic/chemical synthesis , Bridged Bicyclo Compounds, Heterocyclic/chemistry , Cell Line , Crystallography, X-Ray , Darunavir , HIV Protease Inhibitors/chemical synthesis , HIV Protease Inhibitors/chemistry , HIV-1/enzymology , Humans , Ligands , Models, Molecular , Molecular Structure , Protein Conformation , Protein Structure, Tertiary , Stereoisomerism , Structure-Activity Relationship , Sulfonamides/chemical synthesis , Sulfonamides/chemistry
15.
Org Lett ; 6(11): 1777-9, 2004 May 27.
Article in English | MEDLINE | ID: mdl-15151412

ABSTRACT

An efficient methodology for the synthesis of 2-C-branched glyco-amino acid derivatives by diastereoselective ring opening of 1,2-cyclopropanecarboxylated sugars in good yields is reported. [reaction--see text]


Subject(s)
Amino Acids/chemistry , Amino Acids/chemical synthesis , Carbohydrates/chemistry , Cyclopropanes/chemistry , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Conformation , Molecular Structure , Stereoisomerism
16.
J Org Chem ; 68(13): 5261-4, 2003 Jun 27.
Article in English | MEDLINE | ID: mdl-12816487

ABSTRACT

A number of beta-d-glycosyl azide derivatives undergo reduction on treatment with tetrathiomolybdate to produce the corresponding beta-d-glycosylamines exclusively without anomerization under very mild and neutral reaction conditions. Acetyl, allyl, benzoyl, and benzyl protective groups are left untouched under the reaction conditions. An exclusive selectivity in the reduction of anomeric azides is observed, while the C-2 and C-6 azides are left untouched.


Subject(s)
Amines/chemistry , Aminoglycosides/chemical synthesis , Azides/chemistry , Glycosides/chemical synthesis , Molybdenum/chemistry , Magnetic Resonance Spectroscopy , Molecular Structure , Oxidation-Reduction , Stereoisomerism , Structure-Activity Relationship
17.
J Org Chem ; 67(26): 9417-20, 2002 Dec 27.
Article in English | MEDLINE | ID: mdl-12492347

ABSTRACT

Tetrathiomolybdate provides an easy access to beta-hydroxy disulfides, beta-hydroxy sulfides, and selenides from epoxides in a tandem, multistep process in one pot. This strategy has been utilized effectively in the construction of thiabicylo[3.2.2]nonane derivative 24.

18.
Org Lett ; 4(26): 4731-3, 2002 Dec 26.
Article in English | MEDLINE | ID: mdl-12489973

ABSTRACT

[reaction: see text] The propargyloxycarbonyl (Poc) group can be used for the selective protection of the hydroxyl function in carbohydrates and can be removed under neutral conditions using tetrathiomolybdate MoS(4)(2-) (1) in CH(3)CN at room temperature. Under the conditions of deprotection benzylidine acetals, benzyl ethers, acetyl and levulinoyl esters, and allyl and benzyl carbonates are left untouched. It has also been shown that the new protective group (Poc) is compatible with acidic, basic, and also glycosylation conditions.

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